Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M08
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.61 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.3  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    22   5.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   5.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +2

Query: 428 GALTILKQFGIHECGHKEPVAGSKCIMSMIGKKNEKHYILATQD 559
           G   +L+ F I +   K  VAG +C+  ++ K    H +   ++
Sbjct: 587 GEAKVLQNFDIKDKNKKVNVAGCRCVKGILLKSGLYHVLRGNEN 630


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 158 KKDYSQKRGS**KMKITRYKKVQKYLKFYYNNY 256
           +  + +KRG   +   TRY+ ++   +F+YN Y
Sbjct: 265 RSQFERKRG---RQTYTRYQTLELEKEFHYNRY 294


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 374 LTTRCIIIETEKLAKKTHGALTILKQFGIHECGH 475
           +  +C ++E  +      G+LT+ K F    CG+
Sbjct: 80  INLKCSLVEFSENKNCNAGSLTVKKNFANKYCGN 113


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 197 MKITRYKKVQKYLKFYYNNYGFHQ-PY 274
           MK   + ++ K +  YY++Y  HQ PY
Sbjct: 413 MKDPAFYRIYKRIIDYYHSYKMHQKPY 439


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 197 MKITRYKKVQKYLKFYYNNYGFHQ-PY 274
           MK   + ++ K +  YY++Y  HQ PY
Sbjct: 413 MKDPAFYRIYKRIIDYYHSYKMHQKPY 439


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 173 QKRGS**KMKITRYKKVQKYLKFYYNNY 256
           +KRG   +   TRY+ ++   +F+YN Y
Sbjct: 8   RKRG---RQTYTRYQTLELEKEFHYNRY 32


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +2

Query: 311 FKEHINIREQIPKYLNSQAKLLTTRCIII 397
           +K+++N+R+ + KYL    ++  T  I++
Sbjct: 94  WKKNLNLRDSVTKYLIHLKEIEDTEPILL 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,741
Number of Sequences: 438
Number of extensions: 4189
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)