Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M07
         (510 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89659-1|CAA61806.1|  151|Drosophila melanogaster 40S ribosomal ...   167   6e-42
AY058531-1|AAL13760.1|  139|Drosophila melanogaster LD23808p pro...   167   6e-42
AE014296-2235|AAN11844.2|  139|Drosophila melanogaster CG11271-P...   167   6e-42
AE014296-2234|AAN11845.1|  139|Drosophila melanogaster CG11271-P...   167   6e-42
AY102665-1|AAM27494.1|  522|Drosophila melanogaster GH22474p pro...    28   8.4  
AE014298-2736|AAF48856.1|  522|Drosophila melanogaster CG6335-PA...    28   8.4  
AE014298-2735|AAN09471.1|  563|Drosophila melanogaster CG6335-PB...    28   8.4  

>X89659-1|CAA61806.1|  151|Drosophila melanogaster 40S ribosomal
           protein S12 protein.
          Length = 151

 Score =  167 bits (407), Expect = 6e-42
 Identities = 80/125 (64%), Positives = 95/125 (76%)
 Frame = +3

Query: 12  PILSGHNMDVXVALQAVLKPALIXXXXXXXXXXXXXXXDKXQAVLCVLAENCDEAAYKKL 191
           P+L G  MD+  ALQ VLK +LI               DK QAVLC+LAE+ DE  YKKL
Sbjct: 25  PVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKL 83

Query: 192 VQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 371
           V ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+
Sbjct: 84  VTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVV 143

Query: 372 KDYLK 386
           KD+L+
Sbjct: 144 KDHLR 148


>AY058531-1|AAL13760.1|  139|Drosophila melanogaster LD23808p
           protein.
          Length = 139

 Score =  167 bits (407), Expect = 6e-42
 Identities = 80/125 (64%), Positives = 95/125 (76%)
 Frame = +3

Query: 12  PILSGHNMDVXVALQAVLKPALIXXXXXXXXXXXXXXXDKXQAVLCVLAENCDEAAYKKL 191
           P+L G  MD+  ALQ VLK +LI               DK QAVLC+LAE+ DE  YKKL
Sbjct: 13  PVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKL 71

Query: 192 VQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 371
           V ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+
Sbjct: 72  VTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVV 131

Query: 372 KDYLK 386
           KD+L+
Sbjct: 132 KDHLR 136


>AE014296-2235|AAN11844.2|  139|Drosophila melanogaster CG11271-PC,
           isoform C protein.
          Length = 139

 Score =  167 bits (407), Expect = 6e-42
 Identities = 80/125 (64%), Positives = 95/125 (76%)
 Frame = +3

Query: 12  PILSGHNMDVXVALQAVLKPALIXXXXXXXXXXXXXXXDKXQAVLCVLAENCDEAAYKKL 191
           P+L G  MD+  ALQ VLK +LI               DK QAVLC+LAE+ DE  YKKL
Sbjct: 13  PVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKL 71

Query: 192 VQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 371
           V ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+
Sbjct: 72  VTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVV 131

Query: 372 KDYLK 386
           KD+L+
Sbjct: 132 KDHLR 136


>AE014296-2234|AAN11845.1|  139|Drosophila melanogaster CG11271-PB,
           isoform B protein.
          Length = 139

 Score =  167 bits (407), Expect = 6e-42
 Identities = 80/125 (64%), Positives = 95/125 (76%)
 Frame = +3

Query: 12  PILSGHNMDVXVALQAVLKPALIXXXXXXXXXXXXXXXDKXQAVLCVLAENCDEAAYKKL 191
           P+L G  MD+  ALQ VLK +LI               DK QAVLC+LAE+ DE  YKKL
Sbjct: 13  PVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKL 71

Query: 192 VQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 371
           V ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+
Sbjct: 72  VTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVV 131

Query: 372 KDYLK 386
           KD+L+
Sbjct: 132 KDHLR 136


>AY102665-1|AAM27494.1|  522|Drosophila melanogaster GH22474p
           protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 150 VLAENCDEAAYKKLVQAL-CNEHQIPLVKVDNNKKLGEWAGLCKI 281
           V AE+  +   K LVQ   C EHQIPLV V  + +L +  GL K+
Sbjct: 452 VKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQ--GLVKL 494


>AE014298-2736|AAF48856.1|  522|Drosophila melanogaster CG6335-PA,
           isoform A protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 150 VLAENCDEAAYKKLVQAL-CNEHQIPLVKVDNNKKLGEWAGLCKI 281
           V AE+  +   K LVQ   C EHQIPLV V  + +L +  GL K+
Sbjct: 452 VKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQ--GLVKL 494


>AE014298-2735|AAN09471.1|  563|Drosophila melanogaster CG6335-PB,
           isoform B protein.
          Length = 563

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 150 VLAENCDEAAYKKLVQAL-CNEHQIPLVKVDNNKKLGEWAGLCKI 281
           V AE+  +   K LVQ   C EHQIPLV V  + +L +  GL K+
Sbjct: 493 VKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQ--GLVKL 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,139,809
Number of Sequences: 53049
Number of extensions: 385607
Number of successful extensions: 1263
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)