Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_M01
(790 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 4.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 4.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 4.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 4.3
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 4.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 4.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 4.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 4.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 4.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 4.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 4.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 4.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 224 AFYTDDAIVINAHVDRSKRDITNSTRDGKQLLL 322
+F D V++ H D+ + + DGK L+L
Sbjct: 128 SFVADFVKVLSWHTDQGEEFVPGDDYDGKYLVL 160
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKEPKI 81
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKEPKI 81
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKEPKI 81
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKEPKI 81
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKEPKI 81
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKEPKI 81
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 48 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R ++ SR R ++ + P+I
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKI 81
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R ++ SR R ++ + P+I
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKI 81
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R ++ SR R ++ + P+I
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKI 81
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R ++ SR R ++ + P+I
Sbjct: 48 KSYKNENSYRKYRETWKERSRDRTERERSREPKI 81
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
R YK + RK R + SR R ++ + P+I
Sbjct: 281 RSYKNENSYRKYRETSKERSRDRIERERSREPKI 314
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 314
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ K P+I
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRKERERSKEPKI 314
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 50 YKNKREYRKYRETSKERSRNRTERERSKEPKI 81
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 283 YKNKREYRKYRETSKERSRNRTERERSKEPKI 314
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 233 YKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
YK + RK R + SR R ++ K P+I
Sbjct: 283 YKNKREYRKYRETSKERSRNRTERERSKEPKI 314
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK R+ R R SR R ++ K P+I
Sbjct: 48 KSYKNEREYREYRETSRERSRDRKERERSKEPKI 81
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK R+ R R SR R ++ K P+I
Sbjct: 48 KSYKNEREYREYRETSRERSRDRKERERSKEPKI 81
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK R+ R R SR R ++ K P+I
Sbjct: 48 KSYKNEREYREYRETSRERSRDRKERERSKEPKI 81
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK R+ R R SR R ++ K P+I
Sbjct: 48 KSYKNEREYREYRETSRERSRDRKERERSKEPKI 81
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ + P+I
Sbjct: 48 KSYKNENSYRKYRETSKERSRDRTERERSREPKI 81
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ + P+I
Sbjct: 270 KSYKNENSYRKYRETSKERSRDRTERERSREPKI 303
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ + P+I
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRTERERSREPKI 314
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ + P+I
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRTERERSREPKI 314
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ + P+I
Sbjct: 270 KSYKNENSYRKYRETSKERSRDRTERERSREPKI 303
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 239 RQYKTRHLLRKIRNLFRAHSRYR*RIDQPKAPQI 138
+ YK + RK R + SR R ++ + P+I
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRTERERSREPKI 314
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,136
Number of Sequences: 438
Number of extensions: 4595
Number of successful extensions: 61
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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