Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L23
         (526 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004...    36   0.020
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628...    29   1.7  
03_01_0318 - 2495617-2497788                                           29   3.0  
12_01_0590 - 4813764-4814401,4814785-4814872,4815176-4815376,481...    27   9.2  
09_04_0616 + 18977421-18977907,18977984-18978245,18978903-18979149     27   9.2  

>02_05_1230 -
           35099942-35100018,35100138-35100221,35100367-35100475,
           35100564-35100687,35101157-35101253,35101375-35101507,
           35101654-35101731,35101821-35101928,35102011-35102078,
           35102181-35102279,35102379-35102505,35102623-35102707,
           35103297-35103373,35103482-35103562
          Length = 448

 Score = 35.9 bits (79), Expect = 0.020
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
 Frame = +2

Query: 218 VYVVGVGMTNFVKPSTGG---DYPDFGKEAVLEALAD-ARIKYDDIQQAVCGYVFGDST- 382
           V VV    T   K   GG    YP+     VL+A+ D  +I   +I   V G V G  + 
Sbjct: 49  VVVVAAYRTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQ 108

Query: 383 ----CGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVXL 520
               C     Y      +P+  VN  CS+G  A+      I+ G  D+ +
Sbjct: 109 RAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGI 158


>10_08_0258 +
           16261454-16261540,16261636-16261712,16262734-16262818,
           16262931-16263057,16263147-16263245,16263343-16263410,
           16263514-16263621,16263727-16263804,16263921-16264053,
           16264138-16264234,16264465-16264588,16264668-16264776,
           16264899-16264982,16265071-16265180
          Length = 461

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
 Frame = +2

Query: 218 VYVVGVGMTNFVKPSTGGDYPDFGKEAVL----EALAD-ARIKYDDIQQAVCGYVFGDST 382
           V +V    T   K   GG + D   E +L    +AL D  ++   ++   V G V    +
Sbjct: 51  VVIVAAYRTAICKSKRGG-FKDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTVLAPGS 109

Query: 383 -----CGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVXLA 523
                C     Y      +P+  VN  CS+G  A+      I+ G+ D+ +A
Sbjct: 110 QRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIA 161


>03_01_0318 - 2495617-2497788
          Length = 723

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 62  IYYYLEILSLSCRISNSRSRLYHQRINSDSEFR 160
           ++Y++++LS S  ++ S  RL HQR    ++ R
Sbjct: 136 VFYWMQLLSASACVALSLVRLVHQRYGGSADAR 168


>12_01_0590 -
           4813764-4814401,4814785-4814872,4815176-4815376,
           4816803-4816830,4817136-4817339,4817352-4819136,
           4820358-4821139
          Length = 1241

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 52  ILRYLLLSRDIKFILPYQ 105
           +LRYL +S D+K +LP Q
Sbjct: 588 LLRYLKISHDVKLVLPSQ 605


>09_04_0616 + 18977421-18977907,18977984-18978245,18978903-18979149
          Length = 331

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 264 PEVTIPTSARKRC*RPWLTLVL 329
           PE    +SA  RC +PWL L+L
Sbjct: 300 PETMTASSASTRCTQPWLLLLL 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,280,189
Number of Sequences: 37544
Number of extensions: 257916
Number of successful extensions: 503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)