Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L23
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...   142   1e-34
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...   142   1e-34
U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa ...    33   0.095
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score =  142 bits (344), Expect = 1e-34
 Identities = 66/104 (63%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
 Frame = +2

Query: 215 KVYVVGVGMTNFVKPST--GGDYPDFGKEAVLEALADARIKYDDIQQAVCGYVFGDSTCG 388
           KVY+VGVGMT F KP +  G DYPD  KEAV  AL D ++KY DIQQA  GY+FG + CG
Sbjct: 7   KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66

Query: 389 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVXL 520
           QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G  DV L
Sbjct: 67  QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESGNSDVVL 110


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score =  142 bits (344), Expect = 1e-34
 Identities = 66/104 (63%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
 Frame = +2

Query: 215 KVYVVGVGMTNFVKPST--GGDYPDFGKEAVLEALADARIKYDDIQQAVCGYVFGDSTCG 388
           KVY+VGVGMT F KP +  G DYPD  KEAV  AL D ++KY DIQQA  GY+FG + CG
Sbjct: 7   KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66

Query: 389 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVXL 520
           QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G  DV L
Sbjct: 67  QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESGNSDVVL 110


>U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa
           thiolase protein 1 protein.
          Length = 407

 Score = 33.5 bits (73), Expect = 0.095
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
 Frame = +2

Query: 182 GIVIIIITMPRKVYVVGVGMT---NFVKPSTGGDYPDFGKEAVLEALADARIKYDDIQQA 352
           GI        +  ++VG   T   +F    +    P+    A+  AL    +K   IQ+ 
Sbjct: 12  GITTSAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEV 71

Query: 353 VCGYVFGDSTCGQRVLYQVGM-----TGIPIYNVNNNCSTGSNALFLSKQLIEGGMCD 511
             G V   +  GQ    Q  +       + +  VN  CS+G  A+ L+ Q I+ G  D
Sbjct: 72  FLGQVC-QANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQD 128


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
           protein F32H2.5 protein.
          Length = 2586

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 377 STCGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVXL 520
           S    R+ Y   + G P ++V+  CS+   AL L+   I  G CD  +
Sbjct: 147 SMFSNRISYTFDLQG-PSFSVDTACSSSLLALQLAVDSIRQGQCDAAI 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,189,309
Number of Sequences: 27780
Number of extensions: 213477
Number of successful extensions: 416
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)