Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L20
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 171 3e-43
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 153 2e-37
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 149 1e-36
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 128 4e-30
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 64 1e-10
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 59 4e-09
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 41 8e-04
07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584 40 0.002
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 40 0.002
11_06_0506 - 24380469-24380632,24381737-24383893,24384488-243845... 38 0.009
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 37 0.013
06_01_0016 + 184804-185025,185121-185237,185324-185737,185827-18... 33 0.15
01_05_0162 + 18759647-18759663,18760128-18760131,18760270-187606... 31 0.62
11_06_0128 - 20389375-20389781,20389988-20392787 31 0.82
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 31 0.82
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 31 0.82
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 31 1.1
08_02_1417 - 26922775-26922986,26923102-26923291,26923816-269239... 30 1.9
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 30 1.9
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 30 1.9
06_01_0932 + 7197418-7198893 29 2.5
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135... 29 3.3
03_02_0726 + 10722759-10722857,10722969-10723058,10723141-107232... 29 3.3
11_03_0013 - 8957277-8957355,8957485-8957591,8957700-8957915,895... 28 5.8
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 171 bits (417), Expect = 3e-43
Identities = 91/200 (45%), Positives = 126/200 (63%), Gaps = 8/200 (4%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHP-KEKICKEAVW 267
+ LL H V ALR VGNIVTG D QTQ +++ AL +LLT K+ I KEA W
Sbjct: 290 VELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACW 349
Query: 268 FLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALI 447
+SNITAGNK Q+QAVI+AG++ +V L EF +KEAAWA+SN + G+ DQ+ L+
Sbjct: 350 TISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLV 409
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLK-------MAGDNAEQVANMIEECGGIDK 606
+ G I P C+LL C D +++ V L+GL N+LK +A + + MI+E G++K
Sbjct: 410 SEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEK 469
Query: 607 IEDLQTHXKMEIYKMAYDII 666
IE+LQ+H EIY+ A I+
Sbjct: 470 IENLQSHDNNEIYEKAVKIL 489
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Frame = +1
Query: 97 LLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLS 276
L+ + +V T A A+ + GT+++ Q V+ LL HP + A+ +
Sbjct: 250 LIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVG 309
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKG-EFQTQKEAAWAVSNLSISGTRDQVAALINC 453
NI G+ Q Q +ID LP +++ L++ + +KEA W +SN++ +G +DQ+ A+IN
Sbjct: 310 NIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNIT-AGNKDQIQAVINA 368
Query: 454 GVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDL 618
G+I P NLL + + +SN +G + +Q+ ++ E G I + DL
Sbjct: 369 GIIGPLVNLLQTAEFDIKKEAAWAISN--ATSGGSHDQIKYLVSE-GCIKPLCDL 420
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Frame = +1
Query: 118 KVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNK 297
++Q A A+ NI +GT E T+VV++ A+ F LL + + ++AVW L N+ AG+
Sbjct: 131 QLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNV-AGDS 189
Query: 298 QQVQAVI--DAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPF 471
+ + ++ + LLP++ + + A W +SN + Q + +P
Sbjct: 190 PKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRG--KPQPSFEQTRPALPAL 247
Query: 472 CNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDLQTH 627
L+ D +V+ LS + D + V E G ++ +L H
Sbjct: 248 ARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVI----EAGVCPRLVELLLH 295
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTLXSVVV 104
D WA+SYL+ G N++IQ VI +G+ L +++
Sbjct: 261 DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLL 294
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTLXSVV 101
+ W IS +T G +QIQ VI +GI+ L +++
Sbjct: 346 EACWTISNITAGNKDQIQAVINAGIIGPLVNLL 378
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 153 bits (370), Expect = 2e-37
Identities = 92/218 (42%), Positives = 126/218 (57%), Gaps = 26/218 (11%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHP-KEKICKEAVW 267
+ LL H V ALR VGNIVTG D QTQ V++ AL LLT+ K+ I KEA W
Sbjct: 296 VELLMHPSASVLIPALRTVGNIVTGDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACW 355
Query: 268 FLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAA-- 441
+SNITAGN++Q+QAVI+A ++ +V L EF +KEAAWA+SN + GT DQ+
Sbjct: 356 TISNITAGNREQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKIFH 415
Query: 442 ---------------LINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKM--------AG 552
L+ G I P C+LL C D +++ V L+GL N+LK+ AG
Sbjct: 416 CHYGLLTTYEMSTRYLVAQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAG 475
Query: 553 DNAEQVANMIEECGGIDKIEDLQTHXKMEIYKMAYDII 666
D A MI++ G++KIE+LQ+H EIY+ A ++
Sbjct: 476 D-VNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKML 512
Score = 76.2 bits (179), Expect = 2e-14
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Frame = +1
Query: 97 LLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLS 276
L+ ++ +V T A A+ + GT+++ Q V+ LL HP + A+ +
Sbjct: 256 LIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSASVLIPALRTVG 315
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKGEFQT-QKEAAWAVSNLSISGTRDQVAALINC 453
NI G+ Q Q VID LP ++ L+ ++ +KEA W +SN++ +G R+Q+ A+IN
Sbjct: 316 NIVTGDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNIT-AGNREQIQAVINA 374
Query: 454 GVIPPFCNLLSCKDTQVINVVLDGLSN 534
+I P +LL + + +SN
Sbjct: 375 NIIAPLVHLLQTAEFDIKKEAAWAISN 401
Score = 58.0 bits (134), Expect = 6e-09
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEF-QTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNL 480
++ VI+ G++P +A L + ++ Q Q EAAWA++N++ SGT D ++ G +P F L
Sbjct: 114 IEEVINTGVVPRFIAFLQREDYPQLQFEAAWALTNIA-SGTSDNTKVVVESGAVPIFVKL 172
Query: 481 LSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGI-DKIEDLQTHXKMEIYKMA 654
LS V + L N +AGD + + +++ GG+ ++ L H K+ + + A
Sbjct: 173 LSSPSEDVREQAVWALGN---VAGD-SPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNA 227
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +1
Query: 118 KVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNK 297
++Q A A+ NI +GT + T+VV+ A+ F LL+ P E + ++AVW L N+ AG+
Sbjct: 137 QLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNV-AGDS 195
Query: 298 QQVQAVI--DAGLLPMIVANLSKGEFQTQKEAAWAVSN 405
+ + ++ GL P++ + + A W +SN
Sbjct: 196 PKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSN 233
Score = 52.8 bits (121), Expect = 2e-07
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLT-HPKEKICKEAVW 267
+ LLS V+ A+ A+GN+ + + +VL L L H K + + A W
Sbjct: 170 VKLLSSPSEDVREQAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATW 229
Query: 268 FLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALI 447
LSN G Q + L + S+ E + +A WA+S LS GT D++ A+I
Sbjct: 230 TLSNFCRGKPQPNFEQVKPALSALQRLIHSQDE-EVLTDACWALSYLS-DGTNDKIQAVI 287
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAE 564
GV P LL V+ L + N+ + GD+ +
Sbjct: 288 ESGVFPRLVELLMHPSASVLIPALRTVGNI--VTGDDMQ 324
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/95 (29%), Positives = 47/95 (49%)
Frame = +1
Query: 202 ALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQK 381
ALS L+ E++ +A W LS ++ G ++QAVI++G+ P +V L
Sbjct: 249 ALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSASVLI 308
Query: 382 EAAWAVSNLSISGTRDQVAALINCGVIPPFCNLLS 486
A V N+ ++G Q +I+ +P NLL+
Sbjct: 309 PALRTVGNI-VTGDDMQTQCVIDHQALPCLLNLLT 342
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTLXSVVV 104
D WA+SYL+ G N++IQ VI SG+ L +++
Sbjct: 267 DACWALSYLSDGTNDKIQAVIESGVFPRLVELLM 300
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTLXSVVVAQGSESTDGRPKSSW 149
+ W IS +T G EQIQ VI + I+ L V + Q +E D + +++W
Sbjct: 352 EACWTISNITAGNREQIQAVINANIIAPL--VHLLQTAE-FDIKKEAAW 397
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 149 bits (362), Expect = 1e-36
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 9/201 (4%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVL-NCDALSH-FPALLTHPKEKICKEAV 264
+ LLSH V ALR VGNIVTG D QTQ ++ + AL F L T K+ + +EA
Sbjct: 289 VELLSHPSPVVLIPALRTVGNIVTGDDAQTQCIVGHPQALPCLFNLLTTTQKKSVKREAC 348
Query: 265 WFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAAL 444
W +SNITAG K+Q+QAVID+ ++ ++ L EF +KEA WA+SN + GT +Q+ L
Sbjct: 349 WTISNITAGTKEQIQAVIDSNIIAPLLHLLQHAEFDVKKEAVWAISNATSGGTFNQIEYL 408
Query: 445 INCGVIPPFCNLLSCKDTQVINVVLDGLSNMLK-------MAGDNAEQVANMIEECGGID 603
++ G I P C+LL +D++ + L+ L N+L+ + N M++E G+D
Sbjct: 409 VSQGCIKPLCDLLVHQDSKTVLTCLEALDNILRVGEAKKNLGACNMNIFVPMVDEADGLD 468
Query: 604 KIEDLQTHXKMEIYKMAYDII 666
KIEDLQ H +EIY A ++
Sbjct: 469 KIEDLQNHDNVEIYNKAVYVL 489
Score = 45.6 bits (103), Expect = 4e-05
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Frame = +1
Query: 91 IPLLSHKEV-KVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVW 267
+ L+ +E ++Q A A+ NI +GT T V+ A+ F LL+ P+E +AVW
Sbjct: 124 VEFLTREEYPQLQFEAAWALTNIASGTAANTMAVIEHGAVPIFVKLLSSPRE----DAVW 179
Query: 268 FLSNITAGNKQQVQAVIDAG-LLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAAL 444
L N+ + + V+ G +LP++ + + +AW +SN + +
Sbjct: 180 ALGNVAGDSTKCRNLVLMHGAMLPLLQQLNEHAKLSMLRNSAWTLSNFCRGKPQPDFKHV 239
Query: 445 INCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDLQT 624
+P L+ +D +++ LS + + DN + V E G D + +L +
Sbjct: 240 E--PALPVLRELILSQDEEILTDSCWALSYLSDGSNDNIQAVI----ETGVCDWLVELLS 293
Query: 625 H 627
H
Sbjct: 294 H 294
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 187 VLNCDALSHFPALLTHPK-EKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKG 363
V+ L F LT + ++ EA W L+NI +G AVI+ G +P+ V LS
Sbjct: 114 VIRSGVLPRFVEFLTREEYPQLQFEAAWALTNIASGTAANTMAVIEHGAVPIFVKLLS-- 171
Query: 364 EFQTQKEAAWAVSNLSISGTRDQVAALINCGVIP 465
+++A WA+ N++ T+ + L++ ++P
Sbjct: 172 --SPREDAVWALGNVAGDSTKCRNLVLMHGAMLP 203
Score = 37.9 bits (84), Expect = 0.007
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Frame = +1
Query: 202 ALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQK 381
AL L+ E+I ++ W LS ++ G+ +QAVI+ G+ +V LS
Sbjct: 242 ALPVLRELILSQDEEILTDSCWALSYLSDGSNDNIQAVIETGVCDWLVELLSHPSPVVLI 301
Query: 382 EAAWAVSNLSISGTRDQVAALI-NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDN 558
A V N+ ++G Q ++ + +P NLL+ TQ +V + + +
Sbjct: 302 PALRTVGNI-VTGDDAQTQCIVGHPQALPCLFNLLT--TTQKKSVKREACWTISNITAGT 358
Query: 559 AEQVANMIEECGGIDKIEDLQTHXKMEIYKMA 654
EQ+ +I+ I + L H + ++ K A
Sbjct: 359 KEQIQAVIDS-NIIAPLLHLLQHAEFDVKKEA 389
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTLXSVV 101
D+ WA+SYL+ G N+ IQ VI +G+ L ++
Sbjct: 260 DSCWALSYLSDGSNDNIQAVIETGVCDWLVELL 292
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTL 89
+ W IS +T G EQIQ VI S I+ L
Sbjct: 346 EACWTISNITAGTKEQIQAVIDSNIIAPL 374
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 DTVWAISYLTXGGN-EQIQMVIXSGIVTTLXSVVVAQGSES 122
+ VWAIS T GG QI+ ++ G + L ++V Q S++
Sbjct: 388 EAVWAISNATSGGTFNQIEYLVSQGCIKPLCDLLVHQDSKT 428
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 128 bits (309), Expect = 4e-30
Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 9/201 (4%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLT--HPKEKICKEAV 264
+ LL H + + + I +G D Q QV++ D L++ LL +PK I K+A
Sbjct: 326 VNLLMHASANILLPVITVLARISSGDDAQVQVLVENDILNYLAPLLARNYPKS-IKKQAC 384
Query: 265 WFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAAL 444
+SNI+ G+K +QAVIDA ++ ++ L E ++EAAWA+SN + G+ DQ+ L
Sbjct: 385 LIVSNISTGSKDNIQAVIDADVISPLIFLLKTSEKDIKEEAAWAISNAASGGSNDQIQYL 444
Query: 445 INCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMA-------GDNAEQVANMIEECGGID 603
++ G + P CN+L+ +D ++ L+GL N+L+ G A I ECGG+D
Sbjct: 445 VSRGCLEPLCNVLTYQDADLVYACLEGLQNILQAGAVGKQGQGSTVNPYAQFILECGGLD 504
Query: 604 KIEDLQTHXKMEIYKMAYDII 666
K+EDLQ IYK+ ++
Sbjct: 505 KLEDLQEVDNDAIYKLVMKLL 525
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +1
Query: 97 LLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLS 276
L H+ ++Q A + NI + T +V C A+ LL I +A+W L
Sbjct: 163 LSRHEHPQLQMEAAWVLTNIAAS--DYTLLVAECGAVPRLVELLESANANIRHQAIWALG 220
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKG-EFQTQKEAAWAVSNL 408
NI A + V+D G + ++A +G + + A WA+SNL
Sbjct: 221 NIAADVPTCREIVLDHGAVTPLLAQFREGMKVPVLRTATWALSNL 265
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 313 VIDAGLLPMIVANLSKGEF-QTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSC 489
+I A +LP LS+ E Q Q EAAW ++N++ S D + CG +P LL
Sbjct: 150 IIRADVLPRFSDFLSRHEHPQLQMEAAWVLTNIAAS---DYTLLVAECGAVPRLVELLES 206
Query: 490 KDTQVINVVLDGLSNM 537
+ + + + L N+
Sbjct: 207 ANANIRHQAIWALGNI 222
Score = 35.5 bits (78), Expect = 0.038
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Frame = +1
Query: 112 EVKVQTAALRAVGNIVTGT-DEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLSNITA 288
+V V A A+ N+ G + QV D +S L+ EKI +A W L I
Sbjct: 251 KVPVLRTATWALSNLCFGKLPAEVQVKPILDIISQ---LIHSVDEKILGDACWALCYICD 307
Query: 289 GNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPP 468
G +Q V+DAG P +V L ++ +S SG QV L+ ++
Sbjct: 308 GVSDGIQHVLDAGACPQLVNLLMHASANILLPVITVLARIS-SGDDAQVQVLVENDILNY 366
Query: 469 FCNLLS 486
LL+
Sbjct: 367 LAPLLA 372
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 DTVWAISYLTXGG-NEQIQMVIXSGIVTTLXSVVVAQGSE 119
+ WAIS GG N+QIQ ++ G + L +V+ Q ++
Sbjct: 424 EAAWAISNAASGGSNDQIQYLVSRGCLEPLCNVLTYQDAD 463
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 64.1 bits (149), Expect = 1e-10
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Frame = +1
Query: 121 VQTAALRAVGNIVTGTDEQTQVVLNC------DALSHFPALLTHPKEKICKEAVWFLSNI 282
+ LR +GN++ D VL ALS L + KE+ W LSNI
Sbjct: 298 ISLIVLRGLGNLIAADDYMVDSVLTVGHNIIDQALSGLIKCLKSDNRVLRKESSWALSNI 357
Query: 283 TAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTR---------DQV 435
AG+ + + + + P+++ ++ +F ++EAA+ + NL + T + +
Sbjct: 358 AAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAAYTLGNLCVVPTGNCELPKIIVEHL 417
Query: 436 AALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIED 615
A+++ G +P F +L+ D + L L L M G +Q ++E GI+ +E
Sbjct: 418 VAIVDGGALPGFIHLVRSADVDTAGLGLQFLE--LVMRGYPNKQGPKLVEMEDGIEAMER 475
Query: 616 LQTHXKMEIYKMAYDII 666
Q H ++ MA ++
Sbjct: 476 FQFHENEQMRNMANGLV 492
Score = 44.8 bits (101), Expect = 6e-05
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Frame = +1
Query: 85 PXIPLL-SHKEVKVQTAALR----AVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKI 249
P +PLL +H K T A+GN+ E +L AL L+ K
Sbjct: 176 PALPLLIAHLGEKSSTLVAEQCAWAIGNVAGEGAELRSTLLAQGALRPLTRLMFSSKGST 235
Query: 250 CKEAVWFLSNITAG--NKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGT 423
+ A W +SN+ G K + + G+L I+A+L K + + E AW V + +S
Sbjct: 236 ARTAAWAMSNLIKGPDPKAANELITIDGVLNAIIASLEKEDEELATEVAWVV--VYLSAL 293
Query: 424 RDQVAALINCGVIPPFCNLLSCKDTQVINVVLDG 525
D+ +LI V+ NL++ D V +V+ G
Sbjct: 294 SDRGISLI---VLRGLGNLIAADDYMVDSVLTVG 324
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 151 NIVTGTDEQTQVVLNCDALSHFPALLTHPKEK----ICKEAVWFLSNITAGNKQQVQAVI 318
NI G E+T+ +L P L+ H EK + ++ W + N+ + ++
Sbjct: 162 NIAAGEPEETKSLLPA-----LPLLIAHLGEKSSTLVAEQCAWAIGNVAGEGAELRSTLL 216
Query: 319 DAGLLPMIVANLSKGEFQTQKEAAWAVSNL 408
G L + + + T + AAWA+SNL
Sbjct: 217 AQGALRPLTRLMFSSKGSTARTAAWAMSNL 246
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/140 (26%), Positives = 66/140 (47%)
Frame = +1
Query: 85 PXIPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAV 264
P + LL +++KVQ AA A+ + DE +++C+AL +L I EAV
Sbjct: 240 PLVELLESQDLKVQRAAAGALRTLAFKNDENKSQIVDCNALPTLILMLRSEDAAIHYEAV 299
Query: 265 WFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAAL 444
+ N+ + + V++AG L ++ LS ++Q+EAA + + S D +
Sbjct: 300 GVIGNLVHSSPNIKKEVLNAGALQPVIGLLSSCCTESQREAALLLGQFA-SADSDCKVHI 358
Query: 445 INCGVIPPFCNLLSCKDTQV 504
+ G + P +L D Q+
Sbjct: 359 VQRGAVRPLIEMLQSADVQL 378
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
I +L ++ + A+ +GN+V + + VLN AL LL+ + +EA
Sbjct: 284 ILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLNAGALQPVIGLLSSCCTESQREAALL 343
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLS------ISGTRDQ 432
L + + ++ G + ++ L + Q ++ +A+A+ L+ T +Q
Sbjct: 344 LGQFASADSDCKVHIVQRGAVRPLIEMLQSADVQLREMSAFALGRLAQRSSFVSQDTHNQ 403
Query: 433 VAALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIE 612
N G++ P LL K+ + + L + DN + V++ I + GG+ K++
Sbjct: 404 AGIAYNGGLV-PLLKLLDSKNGSLQHNAAFALYGV----ADNEDYVSDFI-KVGGVQKLQ 457
Query: 613 D 615
D
Sbjct: 458 D 458
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +1
Query: 235 PKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQ--------KEAA 390
P E ++ F + A + Q ++DAG LP++V L + + T + AA
Sbjct: 156 PFEHEVEKGAAFALGLLAVKPEHQQLIVDAGALPLLVNLLKRHKNATNLRAVNSVIRRAA 215
Query: 391 WAVSNLSISGTRDQVAALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQV 570
A++NL+ + + I G IPP LL +D +V L + +N Q+
Sbjct: 216 DAITNLAHENSNIKTCVRIE-GGIPPLVELLESQDLKVQRAAAGALRTLAFKNDENKSQI 274
Query: 571 AN 576
+
Sbjct: 275 VD 276
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/97 (28%), Positives = 49/97 (50%)
Frame = +1
Query: 193 NCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQ 372
N DAL + L P + + A L + N + +AG +P++++ LS + +
Sbjct: 400 NIDALL---SKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLR 456
Query: 373 TQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
TQ+ A A+ NLSI D A++I+ G +P ++L
Sbjct: 457 TQEHAVTALLNLSIH--EDNKASIISSGAVPSIVHVL 491
>07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584
Length = 496
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +1
Query: 217 PAL--LTHPKEKICKE-AVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEA 387
PAL L + + +E AV L N++ + + A+ AG + +V L G ++ A
Sbjct: 215 PALVPLLRSTDPVAQESAVTALLNLSLEERNR-SAITAAGAIKPLVYALRTGTASAKQNA 273
Query: 388 AWAVSNLSISGTRDQVAALINCGVIPPFCNLLSCKDTQ 501
A A+ LS+SG + A + CG IPP LLS T+
Sbjct: 274 ACAL--LSLSGIEENRATIGACGAIPPLVALLSAGSTR 309
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/103 (23%), Positives = 46/103 (44%)
Frame = +1
Query: 157 VTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLP 336
++G +E + C A+ ALL+ + K+A+ L + + + + +AV ++P
Sbjct: 280 LSGIEENRATIGACGAIPPLVALLSAGSTRGKKDALTTLYRLCSARRNKERAVSAGAVVP 339
Query: 337 MIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIP 465
+I +G ++K S I RD A++ G IP
Sbjct: 340 LIHLVGERGSGTSEKAMVVLASLAGIVEGRD---AVVEAGGIP 379
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 82 QPXIPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEA 261
Q +P L+ K + ++ AAL + N+ ++ + L+ F +++ P K A
Sbjct: 346 QLLLPFLTEKNIDIKIAALNFISNLSKDASQELAEQIRDTHLNIFVKIISSPTSGNEKAA 405
Query: 262 -VWFLSNITAGNKQQVQAVIDAGLLPMIVANL 354
+ LSN+ +K+ + + +A LLP++++ L
Sbjct: 406 AIGILSNLPVTDKKITELLTEANLLPLLISLL 437
>11_06_0506 -
24380469-24380632,24381737-24383893,24384488-24384541,
24384543-24384597,24384914-24384916,24385192-24385231,
24385576-24385632,24388124-24388412,24389764-24389771,
24390633-24390688,24391207-24391488,24391651-24391811,
24391887-24392121,24392860-24392943,24393022-24393117,
24393333-24394055,24396523-24396987
Length = 1642
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 121 VQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKI 249
VQ AA AVG+ G D+ + VL A++H LL HP EK+
Sbjct: 116 VQAAA--AVGSFACGVDDGVRAVLAAGAVAHLTRLLAHPDEKV 156
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +1
Query: 100 LSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDA-LSHFPALLTHPKEKICKEAVWFLS 276
L H V ++ AA + NI + + L+CD ++ LL + A+ +
Sbjct: 405 LKHASVDIRVAACSCLKNISRSSKVLSAGKLSCDTFIAPLVQLLYDSSMSVQVAALGAIC 464
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQK-EAAWAVSNL 408
NI + ++ +G + +V +LSK T + +A WA+ N+
Sbjct: 465 NIAVNLTPRKSILLQSGAVSQLV-HLSKSMDPTLRLKAVWALRNI 508
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +1
Query: 253 KEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQ 432
+EA L + + + + DAG +P++V+ LS + TQ+ A+ NLSI +
Sbjct: 411 REAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSITDVSTQEHVVTALLNLSI--YEEN 468
Query: 433 VAALINCGVIPPFCNLL 483
A +I G +P ++L
Sbjct: 469 KARIITSGAVPGVVHVL 485
>06_01_0016 +
184804-185025,185121-185237,185324-185737,185827-186888
Length = 604
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 313 VIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ +AG +P++V LS + +TQ+ A A+ NLSI + A++++ IP +L
Sbjct: 361 IAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIH--ENNKASIVDSHAIPKIVEVL 415
>01_05_0162 +
18759647-18759663,18760128-18760131,18760270-18760617,
18760801-18761016,18763367-18763435,18763560-18764209,
18764993-18765089,18765170-18765223,18765305-18765435,
18766818-18767008,18767937-18768574
Length = 804
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 313 VIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIP 465
++ +G+L +V L + + ++ AA +SNL++S + AL+ GVIP
Sbjct: 145 ILSSGMLTRMVRFLDDEDIKVKEAAAGIISNLALSHSNH--GALVEAGVIP 193
>11_06_0128 - 20389375-20389781,20389988-20392787
Length = 1068
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 223 LLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSK 360
LL+ PK KI + N+T + ++QA +G +P VANL+K
Sbjct: 462 LLSVPKNKISGSVPLAIGNLTKLSSLELQANAFSGEIPSTVANLTK 507
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 31.1 bits (67), Expect = 0.82
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 335 P*LWPTLAKESFKPRRKLLGPFPTSASVARGTKL--LHLSIVELYRHSVIYSVA 490
P + P LA E RK P PT + R TKL L +I++L+ S+I VA
Sbjct: 364 PGVRPALADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVA 417
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 339 DCGQP*QRRVSNP-EGSCLGRFQPQHQWHEGPSCCTYQLW 455
DC P +R VS+ E Q WH G CC Y LW
Sbjct: 507 DCTSPARRIVSSSLEELASNTSQSGSLWHGGTPCCWYFLW 546
>06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 340 IVANLSKGEFQTQKE-AAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSCKDTQVINVV 516
+++NL + + Q + AA A+++L +G+R + A+ N G +LL C + + +++
Sbjct: 1089 VLSNLLRSDEQAYRYFAAQALASLVCNGSRGTLLAVANSGAATGLISLLGCAEVDIADLL 1148
>08_02_1417 -
26922775-26922986,26923102-26923291,26923816-26923928,
26924032-26924112,26925329-26926661
Length = 642
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 348 GHNHGQETSINNSLNLLFITCRDV*QKPYRLF 253
GH G+E S+ NSL ++ C DV K Y++F
Sbjct: 237 GHGLGKELSVKNSLIDMYSKCGDV-NKAYQIF 267
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 118 KVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFP 219
K+ ++ V ++T T EQ + LNC A H P
Sbjct: 705 KLNAESVATVNGLITTTVEQIKAALNCSAHGHHP 738
>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Frame = +1
Query: 130 AALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQ 309
+A + + +I EQ Q+ ++ + LL PK +I + ++ I N ++
Sbjct: 600 SACQKLVSIFNQRPEQKQIYVSQNGFLPLMELLELPKNRIITSVLQLINQIVKDNTTFLE 659
Query: 310 AVIDAGLLPMIVANLSKGE--FQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
GL+P +V N + + + + +A+ + L + T + I C IP + L
Sbjct: 660 NACLVGLIP-VVMNFAVPDRAKEVRVQASRFLQQLCQASTL-TLQMFIACQGIPVLVSFL 717
Query: 484 S---CKDTQVINVVLDGLSNMLKM 546
K +++++ +DG+ + K+
Sbjct: 718 EPDYAKYREMVHLAIDGIWQVFKL 741
>06_01_0932 + 7197418-7198893
Length = 491
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +1
Query: 124 QTAALRAVGNIVTGTDEQTQVVLNCDAL-SHFPALLTHPKEKICKEAVWFLSNITAGNKQ 300
Q AL A+ + G + + L L L+ E + A + N++
Sbjct: 155 QEGALEALKQTLRGGENGVRRALCTPRLLDGLRRLMGSGHEGVRVSAAACVVNLSLEPAN 214
Query: 301 QVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNL 480
+VQ ++ A L+P++V L+ + + AA AV +LSI R+++ + G +PP L
Sbjct: 215 RVQ-LVRAELVPVLVGLLAAASPELRDHAAGAVYSLSIE-ERNRIPIGV-LGAVPPLLRL 271
Query: 481 LS 486
L+
Sbjct: 272 LA 273
>03_02_0750 + 10909130-10909616,10912257-10912916,10913139-10913544,
10914376-10914757,10914918-10915679,10916106-10916165,
10916695-10917105
Length = 1055
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 340 IVANLSKGEFQTQKE---AAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSCKDTQVIN 510
+++NL + + Q + AA A+++L +G+R + A+ N G +LL C + + +
Sbjct: 954 VLSNLFRSDEQAYRYRYFAAQALASLVCNGSRGTLLAVANSGAATGLISLLGCAEVDIAD 1013
Query: 511 VV 516
++
Sbjct: 1014 LL 1015
>03_02_0726 + 10722759-10722857,10722969-10723058,10723141-10723245,
10723597-10723698,10724721-10724805,10725281-10725365,
10725473-10725517,10725685-10728672,10728839-10729055,
10729193-10729765
Length = 1462
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 165 NRRTNSSCPELRCSLTLPGFTDSSEREDMQRGGMVSVKHHGR 290
+R N + +LRCS + E+E+MQ G +S K +GR
Sbjct: 1060 DRSENLNNSKLRCSKRNKSLSLDHEKENMQDNGTLSSKSNGR 1101
>11_03_0013 -
8957277-8957355,8957485-8957591,8957700-8957915,
8958191-8958907,8959483-8959656,8960292-8960546
Length = 515
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Frame = -2
Query: 551 PAIFSMLLRPSSTT-----LITWVSLQLSRLQNGGITPQLISAATW-SLVP 417
P + L+RP++T L+ W+ L RLQNG I +++ + + SL P
Sbjct: 317 PCVPKSLIRPTNTDMPQDGLLLWLEEHLRRLQNGMIKIRMLKTSRYISLFP 367
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,652,380
Number of Sequences: 37544
Number of extensions: 395112
Number of successful extensions: 1102
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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