Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L20
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 269 1e-72
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 269 1e-72
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 269 1e-72
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 130 1e-30
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 130 1e-30
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 130 1e-30
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 73 2e-13
Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z79759-6|CAB02135.3| 452|Caenorhabditis elegans Hypothetical pr... 33 0.24
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ... 31 0.56
U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical pr... 31 0.73
U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical ... 30 1.7
AF003137-8|AAB93645.3| 494|Caenorhabditis elegans Hypothetical ... 30 1.7
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.9
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 269 bits (660), Expect = 1e-72
Identities = 125/192 (65%), Positives = 157/192 (81%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+PLL H +VKVQTAALRAVGNIVTGTDEQTQ+VL+ L P LL H KEKI KEAVWF
Sbjct: 283 VPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWF 342
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALIN 450
+SNITAGN+QQVQ V DAG++PMI+ L +G+F TQKEAAWA+SN++ISG +QV ++
Sbjct: 343 VSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVK 402
Query: 451 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDLQTHX 630
GV+ PFC +LSC D+Q+I VVLDG++N+LKMAG+ AEQV + IEECGG+DKIE+LQ H
Sbjct: 403 LGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEECGGLDKIENLQNHE 462
Query: 631 KMEIYKMAYDII 666
+IYK+A++II
Sbjct: 463 NEDIYKLAFEII 474
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/163 (26%), Positives = 80/163 (49%)
Frame = +1
Query: 97 LLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLS 276
L+ H++ + + A+ + G +E Q+V+ ++H LL H K+ A+ +
Sbjct: 243 LIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVG 302
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCG 456
NI G +Q Q V+D+G+L + L+ + + KEA W VSN++ +G + QV + + G
Sbjct: 303 NIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT-AGNQQQVQDVFDAG 361
Query: 457 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
++P +LL D +SN+ N QV M++
Sbjct: 362 IMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPN--QVEQMVK 402
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ +I +G+LP++V LS + Q EAAWA++N++ SGT +Q A++N G +P F LL
Sbjct: 101 IDDLIGSGILPVLVQCLSSTDPNLQFEAAWALTNIA-SGTSEQTQAVVNAGAVPLFLQLL 159
Query: 484 SCKDTQVINVVLDGLSNML 540
SC + V + L N++
Sbjct: 160 SCGNLNVCEQSVWALGNII 178
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+ LS + +Q A A+ NI +GT EQTQ V+N A+ F LL+ +C+++VW
Sbjct: 114 VQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWA 173
Query: 271 LSNITAGNKQQVQAVIDAGLL-PMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALI 447
L NI ++ G+L P++ + + W + NL A++
Sbjct: 174 LGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVV 233
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
++P L+ +DT N+++D + + + E + +IE
Sbjct: 234 RT-ILPALSLLIHHQDT---NILIDTVWALSYLTDGGNEHIQMVIE 275
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTL 89
DTVWA+SYLT GGNE IQMVI + +VT L
Sbjct: 254 DTVWALSYLTDGGNEHIQMVIEAQVVTHL 282
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIV 80
+ VW +S +T G +Q+Q V +GI+
Sbjct: 338 EAVWFVSNITAGNQQQVQDVFDAGIM 363
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 269 bits (660), Expect = 1e-72
Identities = 125/192 (65%), Positives = 157/192 (81%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+PLL H +VKVQTAALRAVGNIVTGTDEQTQ+VL+ L P LL H KEKI KEAVWF
Sbjct: 283 VPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWF 342
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALIN 450
+SNITAGN+QQVQ V DAG++PMI+ L +G+F TQKEAAWA+SN++ISG +QV ++
Sbjct: 343 VSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVK 402
Query: 451 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDLQTHX 630
GV+ PFC +LSC D+Q+I VVLDG++N+LKMAG+ AEQV + IEECGG+DKIE+LQ H
Sbjct: 403 LGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEECGGLDKIENLQNHE 462
Query: 631 KMEIYKMAYDII 666
+IYK+A++II
Sbjct: 463 NEDIYKLAFEII 474
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/163 (26%), Positives = 80/163 (49%)
Frame = +1
Query: 97 LLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLS 276
L+ H++ + + A+ + G +E Q+V+ ++H LL H K+ A+ +
Sbjct: 243 LIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVG 302
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCG 456
NI G +Q Q V+D+G+L + L+ + + KEA W VSN++ +G + QV + + G
Sbjct: 303 NIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT-AGNQQQVQDVFDAG 361
Query: 457 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
++P +LL D +SN+ N QV M++
Sbjct: 362 IMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPN--QVEQMVK 402
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ +I +G+LP++V LS + Q EAAWA++N++ SGT +Q A++N G +P F LL
Sbjct: 101 IDDLIGSGILPVLVQCLSSTDPNLQFEAAWALTNIA-SGTSEQTQAVVNAGAVPLFLQLL 159
Query: 484 SCKDTQVINVVLDGLSNML 540
SC + V + L N++
Sbjct: 160 SCGNLNVCEQSVWALGNII 178
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+ LS + +Q A A+ NI +GT EQTQ V+N A+ F LL+ +C+++VW
Sbjct: 114 VQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWA 173
Query: 271 LSNITAGNKQQVQAVIDAGLL-PMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALI 447
L NI ++ G+L P++ + + W + NL A++
Sbjct: 174 LGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVV 233
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
++P L+ +DT N+++D + + + E + +IE
Sbjct: 234 RT-ILPALSLLIHHQDT---NILIDTVWALSYLTDGGNEHIQMVIE 275
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTL 89
DTVWA+SYLT GGNE IQMVI + +VT L
Sbjct: 254 DTVWALSYLTDGGNEHIQMVIEAQVVTHL 282
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIV 80
+ VW +S +T G +Q+Q V +GI+
Sbjct: 338 EAVWFVSNITAGNQQQVQDVFDAGIM 363
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 269 bits (660), Expect = 1e-72
Identities = 125/192 (65%), Positives = 157/192 (81%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+PLL H +VKVQTAALRAVGNIVTGTDEQTQ+VL+ L P LL H KEKI KEAVWF
Sbjct: 192 VPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWF 251
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALIN 450
+SNITAGN+QQVQ V DAG++PMI+ L +G+F TQKEAAWA+SN++ISG +QV ++
Sbjct: 252 VSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVK 311
Query: 451 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDLQTHX 630
GV+ PFC +LSC D+Q+I VVLDG++N+LKMAG+ AEQV + IEECGG+DKIE+LQ H
Sbjct: 312 LGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEECGGLDKIENLQNHE 371
Query: 631 KMEIYKMAYDII 666
+IYK+A++II
Sbjct: 372 NEDIYKLAFEII 383
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/163 (26%), Positives = 80/163 (49%)
Frame = +1
Query: 97 LLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLS 276
L+ H++ + + A+ + G +E Q+V+ ++H LL H K+ A+ +
Sbjct: 152 LIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVG 211
Query: 277 NITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCG 456
NI G +Q Q V+D+G+L + L+ + + KEA W VSN++ +G + QV + + G
Sbjct: 212 NIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT-AGNQQQVQDVFDAG 270
Query: 457 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
++P +LL D +SN+ N QV M++
Sbjct: 271 IMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPN--QVEQMVK 311
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ +I +G+LP++V LS + Q EAAWA++N++ SGT +Q A++N G +P F LL
Sbjct: 10 IDDLIGSGILPVLVQCLSSTDPNLQFEAAWALTNIA-SGTSEQTQAVVNAGAVPLFLQLL 68
Query: 484 SCKDTQVINVVLDGLSNML 540
SC + V + L N++
Sbjct: 69 SCGNLNVCEQSVWALGNII 87
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+ LS + +Q A A+ NI +GT EQTQ V+N A+ F LL+ +C+++VW
Sbjct: 23 VQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWA 82
Query: 271 LSNITAGNKQQVQAVIDAGLL-PMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALI 447
L NI ++ G+L P++ + + W + NL A++
Sbjct: 83 LGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVV 142
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
++P L+ +DT N+++D + + + E + +IE
Sbjct: 143 RT-ILPALSLLIHHQDT---NILIDTVWALSYLTDGGNEHIQMVIE 184
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIVTTL 89
DTVWA+SYLT GGNE IQMVI + +VT L
Sbjct: 163 DTVWALSYLTDGGNEHIQMVIEAQVVTHL 191
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIV 80
+ VW +S +T G +Q+Q V +GI+
Sbjct: 247 EAVWFVSNITAGNQQQVQDVFDAGIM 272
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 130 bits (313), Expect = 1e-30
Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Frame = +1
Query: 133 ALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEK-ICKEAVWFLSNITAGNKQQVQ 309
ALR +GN+ TG D TQ V++ +L L+ + I KE W +SNI AG ++Q+Q
Sbjct: 322 ALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQ 381
Query: 310 AVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSC 489
AV+DA LLP+++ L G+ + Q EA+WA+SNL+ GT QV A++ V+P C L
Sbjct: 382 AVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQ 441
Query: 490 KDTQVINVVLDGLSNMLKMAGD----NAEQVANMIEECGGIDKIEDLQTHXKMEIYKMAY 657
+T ++N L+ L ++ + + + + +EE GG+D +E LQ +IY AY
Sbjct: 442 TNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAY 501
Query: 658 DII 666
II
Sbjct: 502 RII 504
Score = 74.1 bits (174), Expect = 8e-14
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+ L+ H + +V+ A AV + G DEQ ++ L H A E + A+
Sbjct: 267 VKLVQHTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFKEA-ENLVAPALRT 325
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQT-QKEAAWAVSNLSISGTRDQVAALI 447
L N+ GN QAVID G L I+ + K + KE W VSN+ I+GT+ Q+ A++
Sbjct: 326 LGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNI-IAGTQKQIQAVL 384
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEE 588
+ ++P N+L D + LSN+ + G QV M+E+
Sbjct: 385 DANLLPVLINVLKSGDHKCQFEASWALSNLAQ--GGTNRQVVAMLED 429
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/105 (31%), Positives = 58/105 (55%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ VI GLL +V LS + Q EAAWA++N+ +SG+ +Q A + GV P +L
Sbjct: 125 IDEVIHCGLLQALVQALSVENERVQYEAAWALTNI-VSGSTEQTIAAVEAGVTIPLIHLS 183
Query: 484 SCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDL 618
+ Q+ L ++N +AGD++ Q+ + + +C G++ + L
Sbjct: 184 VHQSAQISEQALWAVAN---IAGDSS-QLRDYVIKCHGVEALMHL 224
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 187 VLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGL-LPMIVANLSKG 363
V++C L L+ E++ EA W L+NI +G+ +Q A ++AG+ +P+I ++ +
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 364 EFQTQKEAAWAVSNLSISGTRDQVA-ALINCGVIPPFCNLLSCKD 495
Q ++A WAV+N I+G Q+ +I C + +L+ D
Sbjct: 188 A-QISEQALWAVAN--IAGDSSQLRDYVIKCHGVEALMHLMEKVD 229
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 82 QPXIPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEA 261
Q + LS + +VQ A A+ NIV+G+ EQT + L H +I ++A
Sbjct: 135 QALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQA 194
Query: 262 VWFLSNITAGNKQQVQAVIDAGLLPMIVANLSK----GEFQTQKEAAWAVSNL 408
+W ++NI + Q VI + ++ + K G+ + AWA SN+
Sbjct: 195 LWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHV-RTIAWAFSNM 246
Score = 34.3 bits (75), Expect = 0.079
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIV 80
D WA+SYLT G +EQI++ SG++
Sbjct: 280 DACWAVSYLTDGPDEQIELARESGVL 305
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 130 bits (313), Expect = 1e-30
Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Frame = +1
Query: 133 ALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEK-ICKEAVWFLSNITAGNKQQVQ 309
ALR +GN+ TG D TQ V++ +L L+ + I KE W +SNI AG ++Q+Q
Sbjct: 322 ALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQ 381
Query: 310 AVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSC 489
AV+DA LLP+++ L G+ + Q EA+WA+SNL+ GT QV A++ V+P C L
Sbjct: 382 AVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQ 441
Query: 490 KDTQVINVVLDGLSNMLKMAGD----NAEQVANMIEECGGIDKIEDLQTHXKMEIYKMAY 657
+T ++N L+ L ++ + + + + +EE GG+D +E LQ +IY AY
Sbjct: 442 TNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAY 501
Query: 658 DII 666
II
Sbjct: 502 RII 504
Score = 74.1 bits (174), Expect = 8e-14
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+ L+ H + +V+ A AV + G DEQ ++ L H A E + A+
Sbjct: 267 VKLVQHTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFKEA-ENLVAPALRT 325
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQT-QKEAAWAVSNLSISGTRDQVAALI 447
L N+ GN QAVID G L I+ + K + KE W VSN+ I+GT+ Q+ A++
Sbjct: 326 LGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNI-IAGTQKQIQAVL 384
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEE 588
+ ++P N+L D + LSN+ + G QV M+E+
Sbjct: 385 DANLLPVLINVLKSGDHKCQFEASWALSNLAQ--GGTNRQVVAMLED 429
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/105 (31%), Positives = 58/105 (55%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ VI GLL +V LS + Q EAAWA++N+ +SG+ +Q A + GV P +L
Sbjct: 125 IDEVIHCGLLQALVQALSVENERVQYEAAWALTNI-VSGSTEQTIAAVEAGVTIPLIHLS 183
Query: 484 SCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDL 618
+ Q+ L ++N +AGD++ Q+ + + +C G++ + L
Sbjct: 184 VHQSAQISEQALWAVAN---IAGDSS-QLRDYVIKCHGVEALMHL 224
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 187 VLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGL-LPMIVANLSKG 363
V++C L L+ E++ EA W L+NI +G+ +Q A ++AG+ +P+I ++ +
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 364 EFQTQKEAAWAVSNLSISGTRDQVA-ALINCGVIPPFCNLLSCKD 495
Q ++A WAV+N I+G Q+ +I C + +L+ D
Sbjct: 188 A-QISEQALWAVAN--IAGDSSQLRDYVIKCHGVEALMHLMEKVD 229
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 82 QPXIPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEA 261
Q + LS + +VQ A A+ NIV+G+ EQT + L H +I ++A
Sbjct: 135 QALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQA 194
Query: 262 VWFLSNITAGNKQQVQAVIDAGLLPMIVANLSK----GEFQTQKEAAWAVSNL 408
+W ++NI + Q VI + ++ + K G+ + AWA SN+
Sbjct: 195 LWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHV-RTIAWAFSNM 246
Score = 34.3 bits (75), Expect = 0.079
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIV 80
D WA+SYLT G +EQI++ SG++
Sbjct: 280 DACWAVSYLTDGPDEQIELARESGVL 305
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 130 bits (313), Expect = 1e-30
Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Frame = +1
Query: 133 ALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEK-ICKEAVWFLSNITAGNKQQVQ 309
ALR +GN+ TG D TQ V++ +L L+ + I KE W +SNI AG ++Q+Q
Sbjct: 322 ALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQ 381
Query: 310 AVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSC 489
AV+DA LLP+++ L G+ + Q EA+WA+SNL+ GT QV A++ V+P C L
Sbjct: 382 AVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQ 441
Query: 490 KDTQVINVVLDGLSNMLKMAGD----NAEQVANMIEECGGIDKIEDLQTHXKMEIYKMAY 657
+T ++N L+ L ++ + + + + +EE GG+D +E LQ +IY AY
Sbjct: 442 TNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAY 501
Query: 658 DII 666
II
Sbjct: 502 RII 504
Score = 74.1 bits (174), Expect = 8e-14
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Frame = +1
Query: 91 IPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWF 270
+ L+ H + +V+ A AV + G DEQ ++ L H A E + A+
Sbjct: 267 VKLVQHTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFKEA-ENLVAPALRT 325
Query: 271 LSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQT-QKEAAWAVSNLSISGTRDQVAALI 447
L N+ GN QAVID G L I+ + K + KE W VSN+ I+GT+ Q+ A++
Sbjct: 326 LGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNI-IAGTQKQIQAVL 384
Query: 448 NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEE 588
+ ++P N+L D + LSN+ + G QV M+E+
Sbjct: 385 DANLLPVLINVLKSGDHKCQFEASWALSNLAQ--GGTNRQVVAMLED 429
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/105 (31%), Positives = 58/105 (55%)
Frame = +1
Query: 304 VQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
+ VI GLL +V LS + Q EAAWA++N+ +SG+ +Q A + GV P +L
Sbjct: 125 IDEVIHCGLLQALVQALSVENERVQYEAAWALTNI-VSGSTEQTIAAVEAGVTIPLIHLS 183
Query: 484 SCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDL 618
+ Q+ L ++N +AGD++ Q+ + + +C G++ + L
Sbjct: 184 VHQSAQISEQALWAVAN---IAGDSS-QLRDYVIKCHGVEALMHL 224
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 187 VLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQAVIDAGL-LPMIVANLSKG 363
V++C L L+ E++ EA W L+NI +G+ +Q A ++AG+ +P+I ++ +
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 364 EFQTQKEAAWAVSNLSISGTRDQVA-ALINCGVIPPFCNLLSCKD 495
Q ++A WAV+N I+G Q+ +I C + +L+ D
Sbjct: 188 A-QISEQALWAVAN--IAGDSSQLRDYVIKCHGVEALMHLMEKVD 229
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 82 QPXIPLLSHKEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEA 261
Q + LS + +VQ A A+ NIV+G+ EQT + L H +I ++A
Sbjct: 135 QALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQA 194
Query: 262 VWFLSNITAGNKQQVQAVIDAGLLPMIVANLSK----GEFQTQKEAAWAVSNL 408
+W ++NI + Q VI + ++ + K G+ + AWA SN+
Sbjct: 195 LWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHV-RTIAWAFSNM 246
Score = 34.3 bits (75), Expect = 0.079
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 3 DTVWAISYLTXGGNEQIQMVIXSGIV 80
D WA+SYLT G +EQI++ SG++
Sbjct: 280 DACWAVSYLTDGPDEQIELARESGVL 305
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/143 (25%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Frame = +1
Query: 253 KEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQ 432
+E + +SNI +Q + +I +G+L + + E+++++EAA+ + + S +
Sbjct: 339 QEVCFIISNICVEGEQTIDKLISSGVLREVARVMEASEYRSRREAAFVICHCCASANQKH 398
Query: 433 VAALINCGVIPPFCNLLSCKDTQVINVVLDGLSNML-----KMAGDNAEQVANMIEECGG 597
+ ++ G++ F +LL+C D +++ +LD + +L ++ DN+ VA +EE G
Sbjct: 399 LEYVVELGMLSAFTDLLTCMDVSLVSYILDAIYLLLQFGEMRLLPDNSNPVAIKLEEIGC 458
Query: 598 IDKIEDLQTHXKMEIYKMAYDII 666
+K+E L ++I+ AY II
Sbjct: 459 REKLEFLCESQSVDIHARAYTII 481
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/143 (25%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Frame = +1
Query: 253 KEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQ 432
+E + +SNI +Q + +I +G+L + + E+++++EAA+ + + S +
Sbjct: 339 QEVCFIISNICVEGEQTIDKLISSGVLREVARVMEASEYRSRREAAFVICHCCASANQKH 398
Query: 433 VAALINCGVIPPFCNLLSCKDTQVINVVLDGLSNML-----KMAGDNAEQVANMIEECGG 597
+ ++ G++ F +LL+C D +++ +LD + +L ++ DN+ VA +EE G
Sbjct: 399 LEYVVELGMLSAFTDLLTCMDVSLVSYILDAIYLLLQFGEMRLLPDNSNPVAIKLEEIGC 458
Query: 598 IDKIEDLQTHXKMEIYKMAYDII 666
+K+E L ++I+ AY II
Sbjct: 459 REKLEFLCESQSVDIHARAYTII 481
>Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical
protein F53B2.5 protein.
Length = 447
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +1
Query: 130 AALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNKQQVQ 309
+ LR +GNI G D QT ++++ + E EA W +SN+ AG + V
Sbjct: 239 SCLRLIGNIAVGNDVQTDLLVDNPKFRVVMNIAMSSPEHH-SEAAWIISNVVAGAPRHVD 297
Query: 310 AVIDA--GLLPMIVANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLL 483
++D ++A + G+ + +KE W + NL + Q L++ G++ F LL
Sbjct: 298 YIMDDPDAFYEWVMAGIHTGDKRLRKECLWIIGNLLATADEHQTYLLVSLGIVQHFPALL 357
Query: 484 SCKDTQV 504
D ++
Sbjct: 358 DFDDVRL 364
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 118 KVQTAALRAVGNIVTGTDE-QTQVVLNCDALSHFPALLTHPKEKICKEA 261
+++ L +GN++ DE QT ++++ + HFPALL ++ ++A
Sbjct: 320 RLRKECLWIIGNLLATADEHQTYLLVSLGIVQHFPALLDFDDVRLNEKA 368
>Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical
protein Y53C12A.4 protein.
Length = 338
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 298 QQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNL 408
Q Q V +A +LPM++ +L K EF+ +K+ A +NL
Sbjct: 72 QLAQEVYNANVLPMLIKHLHKFEFECKKDVASVFNNL 108
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 33.5 bits (73), Expect = 0.14
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Frame = +1
Query: 334 PMIVANLSKG---EFQTQKEAAWAVSNLSISGTRDQ--VAALINCGVIPPFCNLLSCKDT 498
P I N K + +TQ+EA AV NLS + DQ V+ L+N + P + D
Sbjct: 208 PEIAGNSQKAVRIQSETQEEAPVAVKNLSANKMNDQIEVSQLMN-EITPESVPAVESLDN 266
Query: 499 QV-INVVLDGLSNMLKMAGDNAEQ-----VANMIEECGGIDKIED 615
Q NVV D L+ + K+A D ++ A++ + G + K E+
Sbjct: 267 QKNANVVGDLLAKVQKVADDTIDKSKTTVAADVAKMSGALQKAEE 311
>Z79759-6|CAB02135.3| 452|Caenorhabditis elegans Hypothetical
protein ZK858.7 protein.
Length = 452
Score = 32.7 bits (71), Expect = 0.24
Identities = 33/117 (28%), Positives = 52/117 (44%)
Frame = +1
Query: 235 PKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNLSI 414
PK+KI E + F+++ G + V + LPM V L + E Q Q EA+ A S++
Sbjct: 36 PKQKILIEKLKFVADSAFGKPHGLFEVSNNQCLPMSVDRLIE-ELQLQ-EASVATSSIDP 93
Query: 415 SGTRDQVAALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIE 585
T +L VI P L + + + +D + M K E VA ++E
Sbjct: 94 EVTEPSEPSLDPRVVIAPSALKLEPEQKRQ-KLEMDAVLEMKKQGVSGQEMVAKLVE 149
>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
protein Y69A2AR.19 protein.
Length = 1256
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = -1
Query: 636 HLXMGLQIFNLVNTTTLLNHVSN-LFGIVTSHLQHVTETI*YNINNLGILATE*ITEWRY 460
+L GLQ +L TT L+ +++ L IV+S +Q +N + +L+++
Sbjct: 381 NLADGLQ--SLFKTTDQLSRMNDKLKPIVSSSVQQTIAVFQVLVNEISLLSSDSAEMSSV 438
Query: 459 NSTIDKCSNLVPRATDAEVGNGPSSFLLGLKLSFAK 352
+ +DKCS +P VG + LKLS ++
Sbjct: 439 MAELDKCSRTLPMDDQRVVGVELMKHINSLKLSLSQ 474
>U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical
protein R02E12.2b protein.
Length = 377
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 298 QQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNL 408
Q Q V +A +LPM++ L K EF+ +K+ +NL
Sbjct: 82 QLAQEVYNANILPMLIKMLPKFEFECKKDVGQIFNNL 118
>U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical
protein R02E12.2a protein.
Length = 636
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 298 QQVQAVIDAGLLPMIVANLSKGEFQTQKEAAWAVSNL 408
Q Q V +A +LPM++ L K EF+ +K+ +NL
Sbjct: 341 QLAQEVYNANILPMLIKMLPKFEFECKKDVGQIFNNL 377
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +1
Query: 343 VANLSKGEFQTQKEAAWAVSNLSISGTRDQVAALINCGVIPPFCNLLSCKDTQVINVVLD 522
+A SK + Q + ++ +SNL + G+ A+IN PP C +L+ T+ V +D
Sbjct: 223 LARESKLKPQQFQGGSFTISNLGMFGSVTNFTAIIN----PPQCAILTIGGTRSEVVSVD 278
Query: 523 GLSNMLKMAGDN 558
G K+ G N
Sbjct: 279 GQLETQKLMGVN 290
>AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical
protein R02F11.4 protein.
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 280 ITAGNKQQVQAVIDA-GLLPMIVANLSKGEFQTQKEAAWA-VSNLSISGTRDQVAALINC 453
+T+G Q +A ++ G L + ANLS + A ++ V +L ISG Q I
Sbjct: 40 VTSGRIQNEKADVEVDGTLDL--ANLSLTNLEKSFAAEYSEVKHLKISGNCFQKFTYIK- 96
Query: 454 GVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGDNAEQVANMIEECGGIDKIEDLQ 621
+ P C ++ +D Q+ + D N+L++ N ++E + + E+L+
Sbjct: 97 --LFPKCQIIDARDCQINKFIADFNYNLLEL-----HLARNQLKETNQLGRFENLK 145
>AF003137-8|AAB93645.3| 494|Caenorhabditis elegans Hypothetical
protein C27A12.8 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Frame = +3
Query: 324 WSPAHDCGQP*QRRVSNPEG-----SCLGRF--QPQHQWHEGPSCCTYQLW 455
W P DCG+ RVS+ E SC RF H WHE +C +LW
Sbjct: 213 WCPGIDCGKA--VRVSHWEPRLVVCSCGSRFCFSCGHDWHEPVNCRLLKLW 261
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 300 TSSGCY*CWSPAHDCGQP*QRRVSNPEGSCLGRFQPQHQWHE 425
T S C+ C P H +R S+ +G C +H HE
Sbjct: 227 TGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHE 268
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 482 SRLQNGGITPQLISAATWSLVPLMLRLET 396
S L+ + P I A +LVPL LRLET
Sbjct: 7 SHLRQADLPPHFIGANETNLVPLTLRLET 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,489,833
Number of Sequences: 27780
Number of extensions: 326482
Number of successful extensions: 900
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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