Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L19
         (616 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    34   0.014
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    33   0.043
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S...    32   0.076
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    29   0.40 
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    29   0.71 
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom...    27   2.2  
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe...    26   5.0  
SPCC1281.05 |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces ...    25   6.6  
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro...    25   6.6  
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos...    25   8.7  
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S...    25   8.7  

>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 647

 Score = 34.3 bits (75), Expect = 0.014
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +3

Query: 336 TSTTLTFASRTAAKDASTH-CARRPKSARASLTTSRTPAASA--SLHARLDVKMATAPVE 506
           T+T     S+     A  H  AR+P S     TT  TPA SA  S HAR   K A+AP  
Sbjct: 464 TTTASKRVSKHDKASAEKHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQASAPSS 523

Query: 507 SASAGMAL 530
             +   A+
Sbjct: 524 PGTTSAAV 531


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 32.7 bits (71), Expect = 0.043
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 336 TSTTLTFASRTAAKDASTHCARRP-KSARASLTTSRTPAASASLHARLDVKMATAPVESA 512
           TS++L  +S T++  AS+        S+  + TTS TP +SA+  +      + +   S+
Sbjct: 135 TSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSS 194

Query: 513 SAGMALNXTTDVNTVCHFAXTTA 581
            A  +LN TT          +TA
Sbjct: 195 LASSSLNSTTSATATSSSLSSTA 217


>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
           Mde10|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 512

 Score = 31.9 bits (69), Expect = 0.076
 Identities = 26/90 (28%), Positives = 35/90 (38%)
 Frame = +2

Query: 344 NPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGCQNGHCSGRECVCRD 523
           NP  C+    K    +LC   +   C+  H KNAG  C  +     +   C+G    C  
Sbjct: 338 NP-CCDGKTCKLTKGSLCDDQQDACCYQCHFKNAGTLCRQSTNPCDKPEFCTGISSKCPV 396

Query: 524 GFKLXYGRKYCVPLCXNNCAGVGNCTSPNR 613
                 GR     L   +CA  G CTS +R
Sbjct: 397 DENWDDGRICQDSLGMGSCAS-GVCTSASR 425


>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 29.5 bits (63), Expect = 0.40
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +3

Query: 336 TSTTLTFASRTAAKDASTHCARRPKSARASLTT--SRTPAASASLHARLDVKMATAPVES 509
           TS+T +  S +++  +S+  + RP S+ + +TT  S T  ++ ++         ++ V S
Sbjct: 211 TSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSEVPS 270

Query: 510 ASAGMALNXTTDVN 551
           ++A +ALN +   N
Sbjct: 271 STAALALNASKASN 284


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1016

 Score = 28.7 bits (61), Expect = 0.71
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +3

Query: 18   VDYICRSGSCWYPPAVSTRSRGSKVATEVAASKITPMKTSPNFTGTTP 161
            VDY+  +G+C Y P+    S GS     V  +K T   T    T TTP
Sbjct: 905  VDYLSCNGAC-YNPSQYVCSDGSLSPNTVTTTKATTTFTPTPTTTTTP 951


>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 177

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +2

Query: 323 GYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGF 454
           G   NI+  N   P  ++  + +L TA     CFP   KN G F
Sbjct: 85  GMAGNIFARNRIAP--ARWLITSLSTAATFMFCFPKTSKNIGAF 126


>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 349

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
 Frame = +3

Query: 213 EYVISKYLQLNLSRIRGRYLKETDPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTH 392
           E + ++  Q N+  + G     +     S+S V +  ++  ++T  T +S +++  +S+ 
Sbjct: 99  EQIYAQSQQFNI--VEGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSS 156

Query: 393 CARRPKSARA---SLTTSRTPAASASLHARLDVKMATAP--------VESASAGMALNXT 539
            + +  S+ +   S ++SRT +   + H     +    P        + +A+ G   N T
Sbjct: 157 SSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYRPTVFPYTTISHYNITNATNGTYCNGT 216

Query: 540 TDVNTVCHFAXTTAPVSVIALHQTD 614
              N  C    + A  S   L+ T+
Sbjct: 217 NGTNFTCIVNASNATNSTFWLNGTN 241


>SPCC1281.05 |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 390

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 456 QKPPAFLTWSGKHVQISGAVHNALTHPLLQ 367
           ++PP   TW  +H + + A +N +T  L+Q
Sbjct: 268 KEPPKDATWLFQHAKATAAYNNDITKYLVQ 297


>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 240

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 399 RRPKSARASLTTSRTPAASASLHARLD 479
           ++PK+A +S T +RTP  S     R D
Sbjct: 148 KQPKNANSSSTCTRTPPTSGRFSIRHD 174


>SPAC926.09c |fas1||fatty acid synthase beta subunit
            Fas1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2073

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 213  EYVISKYL--QLNLSRIRGRYLKETDPGPISAS 305
            EY++ K    Q+N++++RG+Y+      P   S
Sbjct: 2012 EYLVKKIFPHQINVAKLRGKYIPNLTAKPFEIS 2044


>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 272

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 402 RPKSARASLTT-SRTPAASASLHARLDVKMATAPVESASAGMALN 533
           + +   +S+T   R+ + S+   AR   +MAT P+E AS+  A N
Sbjct: 214 KSEKKESSMTLRKRSVSPSSQNTARSPKRMATEPIEPASSPAASN 258


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,467,503
Number of Sequences: 5004
Number of extensions: 50993
Number of successful extensions: 175
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)