Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L19
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0245 + 10890555-10890962 31 0.73
02_04_0470 - 23183925-23184743,23184929-23185153 31 0.73
08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200... 31 0.96
05_03_0244 + 10857139-10857516 31 0.96
04_03_0281 - 13872289-13872891 30 1.3
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 30 1.7
04_01_0377 - 4970034-4970687 30 1.7
07_03_1089 - 23879483-23881909 29 2.2
03_05_0849 + 28204180-28204539 29 2.2
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 29 2.9
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 29 3.9
06_01_1000 - 7778907-7780721 29 3.9
05_03_0608 + 16153992-16154960,16158959-16159168,16159252-161595... 29 3.9
02_04_0413 + 22681957-22682035,22682253-22682788 29 3.9
11_06_0134 + 20454405-20455121 28 5.1
04_04_0148 - 23114000-23114113,23114215-23114350,23114813-231149... 28 5.1
03_04_0112 - 17375871-17376099,17377021-17377054,17377237-173774... 28 5.1
12_02_1130 + 26353501-26354218,26354878-26354967,26355080-26355555 28 6.8
06_01_0808 + 6097751-6097913,6098298-6098731 28 6.8
02_04_0542 - 23762549-23762961,23763051-23763453 28 6.8
10_08_0862 - 21143540-21143968 27 8.9
05_03_0637 - 16465433-16466242 27 8.9
04_04_1271 - 32282865-32283167,32283429-32283561,32283683-322839... 27 8.9
03_06_0278 - 32817707-32819167 27 8.9
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230... 27 8.9
02_01_0271 - 1799939-1800676 27 8.9
>05_03_0245 + 10890555-10890962
Length = 135
Score = 31.1 bits (67), Expect = 0.73
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +2
Query: 368 CSKGCVNALCTAPEI--CTCFPDHVKNAGGFCIATCPIGCQNGHCSGRECVCRDGFKLXY 541
CSK A+C A TC GG C+ T G HC G C+ G
Sbjct: 53 CSKKSAAAVCLAAGSPGATC-------CGGRCVDT---GASGEHCGGCNKACKHGRSCCG 102
Query: 542 GRKYCVPLC--XNNCAGVGNCTSPNRC 616
GR CV L +NC N S N+C
Sbjct: 103 GR--CVDLLSDRDNCGSCSNQCS-NKC 126
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 31.1 bits (67), Expect = 0.73
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 366 TAAKDASTHCARRPKSARASLTTSRTPAASASLHA-RLDVKMATAP 500
T+ K +T RR A S S TPA S+S+HA LD + AT P
Sbjct: 34 TSTKAFNTRPLRRRHIASQSSLRSSTPARSSSIHAIGLDEERATRP 79
>08_02_0665 +
19818500-19819013,19819169-19819260,19819435-19820056,
19820575-19820775,19821327-19821395,19821428-19821522,
19821608-19822153
Length = 712
Score = 30.7 bits (66), Expect = 0.96
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 381 ASTHCARRPKSARASLTTSRTPAASASLHARLDVKMATAPVESASAGMALNXTTDVNTVC 560
+S HC P AS TT+ AAS A L + ++ + ASAG+ L+ V T
Sbjct: 250 SSLHCHTPPSCLPASATTTTMAAASPPPLALLTLTLSLT-LSLASAGLVLDDGYTVTTAA 308
Query: 561 HFAXTTAPVS 590
AP +
Sbjct: 309 DLNHPGAPAA 318
>05_03_0244 + 10857139-10857516
Length = 125
Score = 30.7 bits (66), Expect = 0.96
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +2
Query: 368 CSKGCVNALCTAPEI--CTCFPDHVKNAGGFCIATCPIGCQNGHCSGRECVCRDGFKLXY 541
CSK A+C A TC GG C+ T G HC G C+ G
Sbjct: 44 CSKKSAAAVCLAVGSPGATC-------CGGRCVDT---GASGEHCGGCNKACKHGRSCCG 93
Query: 542 GRKYCVPLC--XNNCAGVGNCTSPNRC 616
GR CV L +NC N S N+C
Sbjct: 94 GR--CVDLLSDRDNCGSCSNQCS-NKC 117
>04_03_0281 - 13872289-13872891
Length = 200
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 321 MAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTPAASASLH---ARLDVKMA 491
MAT T+TT T S + A + RAS +T R PA S SL A ++A
Sbjct: 1 MATTPTTTTTTTPSAARLLAPAAAAAAAAAATRASFSTLRPPAISLSLSRSAAGCRGRLA 60
Query: 492 TAPVESASAG 521
A +S AG
Sbjct: 61 RAASKSKGAG 70
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 119 NTNENIAKFYGNNTSHGFLSQNHTVNTM 202
N+N NI++F GN T H ++ H V+ M
Sbjct: 319 NSNSNISQFGGNGTDHSSGNRYHVVDEM 346
>04_01_0377 - 4970034-4970687
Length = 217
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Frame = +2
Query: 365 HCSKGCVNALCTAPEIC-------TCFPDHVKNAGGFC---IATCPIGCQNGHCSGRECV 514
+C GC + C + + C TC + + G+C C GCQNG C +
Sbjct: 48 YCGTGCQSGACCSSQRCGSQGGGATCSNNQCCSQYGYCGFGSEYCGSGCQNGPCRA-DIK 106
Query: 515 CRDGFKLXYGRKYCVPLCXNN--CAGVGNC 598
C GR LC NN C+ G C
Sbjct: 107 C--------GRNANGELCPNNMCCSQWGYC 128
>07_03_1089 - 23879483-23881909
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 267 YLKETDPGPISASFVLAAMAT*G---TSTTLTFASRTAAKDASTHCARRPKSARASLTTS 437
+ + DPGP++A+ ++AA A G + A A +D H A ARASL
Sbjct: 86 FRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLA-- 143
Query: 438 RTPAASASLHARL 476
PA S HA L
Sbjct: 144 -APAVSV-FHALL 154
>03_05_0849 + 28204180-28204539
Length = 119
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 282 DPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCAR 401
DP P S++ ++ M T TT+T ASR A + R
Sbjct: 60 DPPPPSSAMMMTIMTTRARMTTMTMASRARADPSGAELGR 99
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +2
Query: 116 DNTNENIAKFYGNNTSHG----FLSQNHTVNTMS--DIGVCYIEVP 235
DNT +++ F GN + HG L+ +N++S DI V Y VP
Sbjct: 379 DNTTQSLLSFVGNKSVHGLYDFLLNYKSFLNSLSATDIPVLYSPVP 424
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 314 CCNGYVRNIYNPNICEPHCSKGC 382
C NGY I P C P+ S C
Sbjct: 147 CMNGYATGIMAPGRCSPYASASC 169
>06_01_1000 - 7778907-7780721
Length = 604
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 366 TAAKDASTHCARRPKSARASLTTSRTPAASASLHARLDVKMATAPVESASAGMALNXTTD 545
+AA+ + RR + + S +++ +PAA+A A L ++ + P SASA L T
Sbjct: 2 SAARRLAPALRRRRRRSLCSSSSAGSPAAAAPTAASLLAELLSDPAPSASALALLRDTPS 61
Query: 546 VN 551
++
Sbjct: 62 LS 63
>05_03_0608 +
16153992-16154960,16158959-16159168,16159252-16159512,
16160153-16160197,16160324-16160410,16160679-16160774
Length = 555
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +3
Query: 291 PISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTPAASASLHA 470
P S + AA S++ +F + D + + P+SA AS S +P ++AS +A
Sbjct: 48 PPSPTIAAAAAFPLSPSSSSSFVDPPSYADVAASSSSSPRSASAS--ASASPRSAASDYA 105
Query: 471 RLDVKMATAPVESASAGM 524
+ V T E A+ +
Sbjct: 106 LIAVSDPTPEAEPAATSL 123
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 28.7 bits (61), Expect = 3.9
Identities = 31/114 (27%), Positives = 40/114 (35%), Gaps = 2/114 (1%)
Frame = +2
Query: 272 KGNGSRPDLSVIRSCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCF-PDHVKNAG 448
K +G RP CC G C C++ C P C P ++A
Sbjct: 62 KASGHRPQAKFGGGCCCGAG--------CSEQCAE-CPRPPHPPPSPSPCVHPPCCESAA 112
Query: 449 GFCIATCPIGCQNGHCSGRECVCRDGFKLXYGRKYCVP-LCXNNCAGVGNCTSP 607
G C C GC G C G +C + + C P C C+G G C P
Sbjct: 113 GCC---CN-GCSGGGCGGGQCPPSPSCENHH--PPCKPGCCCCGCSG-GECPPP 159
>11_06_0134 + 20454405-20455121
Length = 238
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 428 DHVKNAGGFCIATCPIGCQNGHCSG 502
D + AGG +A P+ C+ GH SG
Sbjct: 64 DAAEVAGGSTVAATPLFCRRGHVSG 88
>04_04_0148 -
23114000-23114113,23114215-23114350,23114813-23114912,
23115003-23115113,23115197-23115234,23115359-23115429,
23116998-23117176,23117272-23117389
Length = 288
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 411 SARASLTTSRTPAASASLHARLDVKMATAPVESASAGMALNXTTDVNTVCHFAXTTAPVS 590
+A AS +R+PAAS++ A +++ P AS G+A+ V V A A +
Sbjct: 10 AAAASPAAARSPAASSAATASAFARLSATP-RVASGGLAVRGQRGVAAVVAAAAGAAAAT 68
Query: 591 VIA 599
+A
Sbjct: 69 PVA 71
>03_04_0112 -
17375871-17376099,17377021-17377054,17377237-17377470,
17377636-17377705
Length = 188
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/57 (40%), Positives = 26/57 (45%)
Frame = +2
Query: 203 SDIGVCYIEVPTAQLVEDQRQIPKGNGSRPDLSVIRSCCNGYVRNIYNPNICEPHCS 373
SD VC E PTA L Q+ I G D + I S +G YNPN HCS
Sbjct: 23 SDFCVCRSEQPTALL---QKAIDYSCGQGADCTSILS--SG---GCYNPNTVAAHCS 71
>12_02_1130 + 26353501-26354218,26354878-26354967,26355080-26355555
Length = 427
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 297 SASFVLAAMAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTPAASASLHARL 476
+ S +A AT GT+ + + + + A ++S+ CA + + + A SA++
Sbjct: 147 TTSDTTSASAT-GTAASASVGAGSVAHESSSRCATFAEQRAPTTNKPTSRAPSAAVRDDG 205
Query: 477 DVKMATAPVESA-SAGMALNXTTDVNTVCHFAXTTAPVSV 593
ATAPV + AG A V T + A A S+
Sbjct: 206 YATPATAPVGAVHDAGDATPAAAPVGTAMNTAQRGANTSL 245
>06_01_0808 + 6097751-6097913,6098298-6098731
Length = 198
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 75 SRGSKVATEVAASKITPMKTSPNFTGTTPA 164
S G K+ +VAA+ P +P+ T TTP+
Sbjct: 111 SNGMKLVVDVAAASPAPAPKAPSTTPTTPS 140
>02_04_0542 - 23762549-23762961,23763051-23763453
Length = 271
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +2
Query: 383 VNALCTAPEICTCFPDHVKNAGGFC---IATCPIGCQNGHC 496
V+A A + C C D + GFC C GCQ G C
Sbjct: 18 VSASTAAAQSCGCASDQCCSKWGFCGTGSDYCGTGCQAGPC 58
>10_08_0862 - 21143540-21143968
Length = 142
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/70 (27%), Positives = 24/70 (34%)
Frame = +2
Query: 356 CEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGCQNGHCSGRECVCRDGFKL 535
C P+C G + T P + P H + GG CPI G K+
Sbjct: 24 CAPYCPGGAPPVIPTPPVVVPTPPAH-HHHGGHGHGRCPIDALKLRVCANVLNGLVGVKI 82
Query: 536 XYGRKYCVPL 565
G C PL
Sbjct: 83 GAGPDDCCPL 92
>05_03_0637 - 16465433-16466242
Length = 269
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 348 LTFASRTAAKDASTHCARRPKSARASLTTSRTPAASASLHARLDVKMATAPVESASAGMA 527
L +A+ + +T P A+ + AA+ S A +ATAP ++ASA A
Sbjct: 173 LYYAATASTSTVTTTTTAPPPQLAAAAPAAVLVAAAVSSTAETQAVVATAPEDAASAAAA 232
>04_04_1271 -
32282865-32283167,32283429-32283561,32283683-32283908,
32284058-32284274,32284398-32284558,32285309-32285449,
32285621-32286944
Length = 834
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 399 RRPKSARASLTTSRTPAASASLHARLDVKMATAPVESASAGMALNXTTDVNTV 557
RR + R S + PAA+A++HAR + +A + +S A ++ N +
Sbjct: 480 RRRQRPRVSDDDAGVPAATAAVHARPNPALAAPSINLSSVKEATGNFSESNII 532
>03_06_0278 - 32817707-32819167
Length = 486
Score = 27.5 bits (58), Expect = 8.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 24 YICRSGSCWYPPAVSTRSRGSK 89
++CRSGSCW + ++ G +
Sbjct: 47 WLCRSGSCWIDASTRSKREGEE 68
>03_02_0752 -
10922456-10922644,10922719-10922796,10922888-10923016,
10923105-10923152,10923243-10923333,10923517-10923648,
10923869-10924086,10925121-10925271,10925360-10926009,
10926715-10926786,10926938-10926985,10927105-10927242,
10927750-10927756,10928064-10928212
Length = 699
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = +2
Query: 341 YNPNICEPHCSKGCV---NALCTAPEICTCFPDHVKNAGGFCIATCPIGCQNGHCSGREC 511
YNP C+ C K C N C + C C KN C C C R+C
Sbjct: 451 YNPCGCQQMCGKDCACVENGTC-CEKYCGC-SKSCKNRFRGC------HCAKSQCRSRQC 502
Query: 512 VC 517
C
Sbjct: 503 PC 504
>02_01_0271 - 1799939-1800676
Length = 245
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 366 TAAKDASTHCARRPKSARASLTTSRTPAASAS 461
TAA A T+CA P+SA S R P ++++
Sbjct: 89 TAAPSADTYCAWTPRSAPGSPGRDRFPKSAST 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,329,072
Number of Sequences: 37544
Number of extensions: 384377
Number of successful extensions: 1353
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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