Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L19
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.036
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    27   0.11 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    27   0.15 
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           27   0.19 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.34 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.8  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   3.1  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        23   3.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   4.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   7.2  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   7.2  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   7.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +3

Query: 276 ETDPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTPAAS 455
           E+  G   AS   A + T G +TTL  AS T    A+        +A A++TT  T   +
Sbjct: 205 ESKAGSTDAS-TPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIPT 263

Query: 456 ASLHAR 473
             L  R
Sbjct: 264 RRLRKR 269



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 39  GSCWYPPAVSTRSRGSKVATEVAASKITPM 128
           GS  YP + +T + G+K  TE  A   TP+
Sbjct: 322 GSREYPTSNATDTDGTKERTEEVALDRTPV 351


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 455 CIATC-PIGCQNGHCSGRECVCR-DGFKLXYGRKY 553
           C A C  +G   GHC    C+CR   FK  + +++
Sbjct: 60  CAANCLSLGKAGGHCEKGVCICRKTSFKDLWDKRF 94


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 455 CIATC-PIGCQNGHCSGRECVCR-DGFKLXYGRKY 553
           C A C  +G   GHC    C+CR   FK  + +++
Sbjct: 60  CAANCLSLGKAGGHCEKVGCICRKTSFKDLWDKRF 94


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 455 CIATC-PIGCQNGHCSGRECVCR 520
           C A C  +G   GHC    C+CR
Sbjct: 35  CAANCHSLGKAGGHCEKGVCICR 57


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 291 PISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTP 446
           P S+   L+A AT  TST+   AS TAA    + C       +  +  S+ P
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMELQVDIADSQQP 874


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 287 RPDLSVIRSCCNGYVRNIYNPNI-CEP 364
           R  + ++ +CC G VR  Y P   C+P
Sbjct: 399 RAFVRILCACCPGRVRRRYQPAFRCKP 425


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 224 IEVPTAQLVEDQRQIPKGNGSRPD 295
           I+V T Q++ED  Q  K    RP+
Sbjct: 615 IDVKTVQVIEDAAQKKKHRAIRPE 638


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 210 ISLMVLTVWFCDRKPWLVL 154
           ++LM +++WF    P+LV+
Sbjct: 279 VALMTISLWFMAWTPYLVI 297


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 210 ISLMVLTVWFCDRKPWLVL 154
           ++LM +++WF    P+LV+
Sbjct: 29  VALMTISLWFMAWTPYLVI 47


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 54  PPAVSTRSRGSKVATEVAASKITPMKTSPNFTGTTP 161
           P   S  S  S  A   AA        SP+ TG++P
Sbjct: 34  PATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSP 69


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
 Frame = +2

Query: 449 GFCIATC-PIGCQNGHCSGRECVCRDGFKLXYGRKYCV 559
           G C   C P    N       C C DG KL      CV
Sbjct: 41  GHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCV 78


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
 Frame = +2

Query: 449 GFCIATC-PIGCQNGHCSGRECVCRDGFKLXYGRKYCV 559
           G C   C P    N       C C DG KL      CV
Sbjct: 41  GHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCV 78


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 165 MVFYRKTIRLTP*AISEYVISKYLQ 239
           MVFY K++ L   ++    I +YLQ
Sbjct: 307 MVFYEKSLALAAFSLMLTSILRYLQ 331


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 15  NVDYICRSGSCWYP 56
           NV ++C +G  W P
Sbjct: 803 NVVFVCHNGMNWMP 816


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,774
Number of Sequences: 438
Number of extensions: 3985
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)