Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L15
(466 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 189 3e-47
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 177 1e-43
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 154 8e-37
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 139 3e-32
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 138 4e-32
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 134 9e-31
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 133 2e-30
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 128 4e-29
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 128 4e-29
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 115 6e-25
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 109 3e-23
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 108 5e-23
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 108 5e-23
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 105 4e-22
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 105 5e-22
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 102 3e-21
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 101 6e-21
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 88 1e-16
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 83 4e-15
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 5e-15
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 82 7e-15
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 71 9e-12
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 57 2e-07
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 57 2e-07
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 39 0.062
UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family prote... 35 0.76
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 4.1
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 33 4.1
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 5.4
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 32 5.4
UniRef50_Q8MPM9 Cluster: C-myb like protein; n=1; Euplotes aedic... 32 5.4
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 7.1
UniRef50_A7AN85 Cluster: Membrane protein, putative; n=1; Babesi... 32 7.1
UniRef50_UPI00015BC654 Cluster: UPI00015BC654 related cluster; n... 31 9.4
UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis s... 31 9.4
UniRef50_Q28MV9 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza sa... 31 9.4
UniRef50_Q7XGB8 Cluster: Retrotransposon protein, putative, Ty3-... 31 9.4
UniRef50_Q4Y529 Cluster: Cholinephosphate cytidylyltransferase, ... 31 9.4
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 31 9.4
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 189 bits (460), Expect = 3e-47
Identities = 89/130 (68%), Positives = 105/130 (80%), Gaps = 2/130 (1%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VVLVL+GRY+GRKA++VK +GTSD+PY HA VAGIDRYPRKV MGK KI KRS
Sbjct: 7 PGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRS 66
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGK 356
KIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEERYK+GK
Sbjct: 67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGK 126
Query: 357 NKWFFQKLRF 386
NKWFFQKLRF
Sbjct: 127 NKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 177 bits (430), Expect = 1e-43
Identities = 81/130 (62%), Positives = 102/130 (78%), Gaps = 2/130 (1%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VVLVL G+YAGRKA+VVK EG SD+ Y HA +AGIDRYP KV K MGK KI KR+
Sbjct: 7 PGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRN 66
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGK 356
K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K + +FEERYK+GK
Sbjct: 67 KLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGK 126
Query: 357 NKWFFQKLRF 386
NKWFF KLRF
Sbjct: 127 NKWFFTKLRF 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 154 bits (374), Expect = 8e-37
Identities = 68/129 (52%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 185
G+V +V+ GRYAG+K ++VK + EG+ P+GHA VAGI+RYP KV K+ G K+ KR+K
Sbjct: 8 GKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTK 67
Query: 186 IKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 359
IKPF+KVVNYNHL+PTRYT+D K S + + P++R++ + + FEER+++GKN
Sbjct: 68 IKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKN 127
Query: 360 KWFFQKLRF 386
+WFF KLRF
Sbjct: 128 QWFFSKLRF 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 139 bits (336), Expect = 3e-32
Identities = 66/132 (50%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
P +V LVL+GR+AG+K +V+K Y GTS++PY HAFV GIDRYPRKV MGK K +R+
Sbjct: 7 PDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKKKFERRT 66
Query: 183 KIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKS 350
++K F K +NYNHLM TRY+V F +K F K+ + RK+ + + ER+ +
Sbjct: 67 RVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVMRERFLA 126
Query: 351 GKNKWFFQKLRF 386
KN+WFF KLRF
Sbjct: 127 AKNRWFFTKLRF 138
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 138 bits (335), Expect = 4e-32
Identities = 62/129 (48%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 185
G+V ++ GRYAG+K ++V+ G+ P+ +A VAGI+RYP KV +RMGK + KRS+
Sbjct: 58 GRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMVEKRSR 117
Query: 186 IKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 359
IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+ + + E+RY SGKN
Sbjct: 118 IKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKN 177
Query: 360 KWFFQKLRF 386
+WFF LRF
Sbjct: 178 RWFFTPLRF 186
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 134 bits (324), Expect = 9e-31
Identities = 56/128 (43%), Positives = 89/128 (69%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VV+V SGRYAG+KA++V+ + ++PYGH+ +AG+ +YP+KV + M K I +RS
Sbjct: 6 PGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTIQRRS 65
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 362
++ F++VVN+ H +PTRY +D S E ++ D +K+ + + R F+ RY +G N+
Sbjct: 66 RVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNR 125
Query: 363 WFFQKLRF 386
WFFQ+LRF
Sbjct: 126 WFFQRLRF 133
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 133 bits (321), Expect = 2e-30
Identities = 65/137 (47%), Positives = 91/137 (66%), Gaps = 9/137 (6%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKNKIHK 176
PG++V++L+G+YAGRKA+V+K + + T+ K PYGH VAGID+YPR + + M + I K
Sbjct: 8 PGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILK 67
Query: 177 RSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDPAKRKKLRFNTRVRFE 335
R+ I+ FVKVVNYNH+MPTRY + E F+ + AKR R + FE
Sbjct: 68 RTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFE 127
Query: 336 ERYKSGKNKWFFQKLRF 386
++K+GK+KWFF KLRF
Sbjct: 128 AKHKAGKSKWFFSKLRF 144
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 128 bits (310), Expect = 4e-29
Identities = 58/128 (45%), Positives = 86/128 (67%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VV+V +GRYAG KA++V+ T ++PYG A +AGI +YP+KV + M K I +RS
Sbjct: 7 PGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQTIARRS 66
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 362
++ F++VVN+ H +PTRY VD S E ++ D +KR + + R F+ RY +G +
Sbjct: 67 QVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSM 126
Query: 363 WFFQKLRF 386
WFFQ+LRF
Sbjct: 127 WFFQRLRF 134
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 128 bits (310), Expect = 4e-29
Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Frame = +3
Query: 12 VVLVLSGRYAGRK-AIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 188
V LV Y+ R +V+K + +G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 189 KPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 362
KPFVKV++YNHLMPTRY ++ K + K+P++R+ + + FEE+Y SGKNK
Sbjct: 123 KPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNK 182
Query: 363 WFFQKLRF 386
WFF LRF
Sbjct: 183 WFFTPLRF 190
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 115 bits (276), Expect = 6e-25
Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 18/146 (12%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+++++L+GRYAG+KAI++K E T D + + V GI RYPRKV KRMG+ +I KR+
Sbjct: 906 PGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQKQIRKRT 965
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEE 338
+K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR N R E
Sbjct: 966 TLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKNLRKYLAE 1025
Query: 339 RY----------KSGKNKWFFQKLRF 386
+Y K ++++ F KLRF
Sbjct: 1026 KYRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 109 bits (262), Expect = 3e-23
Identities = 47/66 (71%), Positives = 58/66 (87%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 185
G+VVLVL GRYAGRKAI++K + +GTSDK +GHA VAGIDRYPR+V +RM K ++HKRSK
Sbjct: 8 GKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKTRLHKRSK 67
Query: 186 IKPFVK 203
IKPF+K
Sbjct: 68 IKPFIK 73
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 108 bits (260), Expect = 5e-23
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 185
G+VV++L GR+AG+KA++VK +GT D+ +GH VAG++R P+KV KRMG KI KR+
Sbjct: 23 GRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSKKIQKRTS 82
Query: 186 IKPFVKVVNYNHLMPTR 236
+KPF+K VN NH+MPTR
Sbjct: 83 VKPFIKYVNLNHIMPTR 99
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 108 bits (260), Expect = 5e-23
Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 11/138 (7%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 185
G+VV++L+GRYAG+KA+VV + GT D+P+ VAG+++ P KVHKR+ K K+ K+S
Sbjct: 25 GRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSKEKLKKKST 84
Query: 186 IKPFVKVVNYNHLMPTRYTV-DFSFEK-FSAKDLKDPAKRKK------LRFNTR-VRFE- 335
IKPF+K +N NH+MPTRY V DF + D+++ +K+ L FN + + +
Sbjct: 85 IKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQALRALHLAFNDKLINIQS 144
Query: 336 ERYKSGKNKWFFQK-LRF 386
E+ K+ K+ F +K LRF
Sbjct: 145 EKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 105 bits (253), Expect = 4e-22
Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M R+
Sbjct: 7 PGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAKVQEMRT 66
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV--RFEER 341
+K F KV+N NH+MPT+YTV + E+F+ K +K + K + + +F E
Sbjct: 67 SVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAISSQFAEE 124
Query: 342 YKSGKNKWFFQKLRF 386
Y+ GK W F KLRF
Sbjct: 125 YRKGKESWLFTKLRF 139
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 105 bits (252), Expect = 5e-22
Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSK 185
G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M + K+++
Sbjct: 7 GRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLVKKTQ 66
Query: 186 IKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRFEERY 344
+K FVK VN+NH+M TR+ V DF F+K S + LKD +K L ++Y
Sbjct: 67 VKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVLRQKY 125
Query: 345 KSGKNKWFFQKLRF 386
+ K WFF+ L+F
Sbjct: 126 LNNKMAWFFKPLQF 139
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 102 bits (245), Expect = 3e-21
Identities = 43/79 (54%), Positives = 61/79 (77%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VV++L+GR AG+KAI++ Y T ++PY + VAGI+++P KV K+M K KI KRS
Sbjct: 99 PGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIKRS 158
Query: 183 KIKPFVKVVNYNHLMPTRY 239
K+K FVK +N NH++PTRY
Sbjct: 159 KVKAFVKYINVNHILPTRY 177
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 101 bits (243), Expect = 6e-21
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VV++LSGR AG KA+VV+ + +PY + VAG+++ P KV K+M KI KR
Sbjct: 7 PGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSKKIEKRL 66
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKSG 353
K+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + + EE + +
Sbjct: 67 KLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLEECFSNP 126
Query: 354 KN 359
+N
Sbjct: 127 EN 128
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 87.8 bits (208), Expect = 1e-16
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 18/127 (14%)
Frame = +3
Query: 60 VKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 239
+K E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 240 TVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNKW 365
++ S E+ +LK+ KRK LR N R E+Y K ++++
Sbjct: 196 RLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRF 255
Query: 366 FFQKLRF 386
F KLRF
Sbjct: 256 LFSKLRF 262
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 82.6 bits (195), Expect = 4e-15
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG V +VL GR+AG+KA++V+ +A VAGI PR++ M + R
Sbjct: 8 PGLVCIVLQGRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAVCRG 64
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 359
+++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R ++
Sbjct: 65 RVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEHRD 124
Query: 360 KWFFQKL 380
WFF KL
Sbjct: 125 TWFFTKL 131
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 82.2 bits (194), Expect = 5e-15
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 138 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 314
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 315 NTRVRFEERYKSGKNKWFFQKLRF 386
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 72.1 bits (169), Expect = 5e-12
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
PG+VV+VL+GRYAG+KA++VK +G S PYGHA V G+ PRKV +N +H+ +
Sbjct: 25 PGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRCA 79
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKFSAK-DLKDPAKRKKLR 311
+ PF ++ R +V F + + K D K AKR K +
Sbjct: 80 RTAPF----GCTEILTAR-SVAFENAQVTKKMDEKKQAKRSKCK 118
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 81.8 bits (193), Expect = 7e-15
Identities = 42/74 (56%), Positives = 49/74 (66%)
Frame = +3
Query: 42 GRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 221
G +I+ +GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 222 LMPTRYTVDFSFEK 263
L RY+VD +K
Sbjct: 64 LKSIRYSVDIPLDK 77
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 71.3 bits (167), Expect = 9e-12
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVK-XYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
G+VV+VLSG+YAG+KA V+K E +K + GI + +K+ M K KI
Sbjct: 8 GRVVIVLSGKYAGKKAFVLKNSNIESLCEKKI---IILGIKKEMKKIKYNMSKRKIISNL 64
Query: 183 KIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLKDPAKRKKLRF-NTRV 326
+ K F+K +N H+ PTRY ++ + K K + ++ K+ +
Sbjct: 65 RFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAKVNLVSINN 124
Query: 327 RFEERYKSGKNKWFFQKLRF 386
++R GKN WFF+K++F
Sbjct: 125 YLQDRLLRGKNLWFFKKMKF 144
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 156 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 335
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 336 ERYKSGKNKWFFQKLRF 386
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 56.8 bits (131), Expect = 2e-07
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 182
P +V+V SG+ AG+KA+V+K E + A + R P++ K + +
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDER-------YVLTACVVRIPKEPEDHQPKWIKRRNA 57
Query: 183 KIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGKN 359
K +K N HL+ TRY D ++D A+ KK+ N T+ + +K K
Sbjct: 58 KFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENKA 117
Query: 360 KWFFQKLRF 386
K+ F L F
Sbjct: 118 KFLFSSLSF 126
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 38.7 bits (86), Expect = 0.062
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 6 GQVVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGI--DRYPRKVHKRM--GKNKIH 173
G+++ L+G+YAG+ +VK Y + + K + H V + ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 174 KRSKIKPFVKVVNYNHLMPTRYTVDFSF 257
K K K +K++N NH++ ++ +++ ++
Sbjct: 68 KIFKYKIKLKILNANHIIVSKKSINVNW 95
>UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family protein;
n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
Repeat family protein - Tetrahymena thermophila SB210
Length = 4758
Score = 35.1 bits (77), Expect = 0.76
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = -3
Query: 302 LTFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHFPGVPV 123
L F F VF F + +C + VI+ NLD+ LYL ++ + L +
Sbjct: 107 LLFDSCFYVFDTNFQQIFNDCSQLFDDVIVQANLDKSLYLLSVIASFQNIQLSQVVDISF 166
Query: 122 DTSDEGMPVWLVGG 81
TSD +++VGG
Sbjct: 167 VTSDPNDNIYVVGG 180
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 33.5 bits (73), Expect = 2.3
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Frame = +3
Query: 12 VVLVLSGRYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDR-YPRKVHKRMGKNKIHKRS-- 182
V +V++ RY G+ + E D+P GHAF AG+D R+V K G+ R+
Sbjct: 225 VPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGKFTGRMTYGARTTT 284
Query: 183 ---------KIKPFVKVVNYNH 221
K+ P + +VNY +
Sbjct: 285 VQESFADALKLAPDIPIVNYEY 306
>UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 189
Score = 33.1 bits (72), Expect = 3.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 108 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKD 287
F+ I ++ +K KR ++ HKR + + N+N L T VD+ EK + +
Sbjct: 3 FLPEIQQFQQKQAKRKSQSSNHKRF----LIIIYNFNRLYLTEIEVDYKNEKITCSIFDE 58
Query: 288 PAKRKK 305
A RK+
Sbjct: 59 MASRKQ 64
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 4.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 228 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 314
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.7 bits (71), Expect = 4.1
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 219 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 365
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 153 MGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 332
+GK K K+ K K + + HL+ ++ T + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 333 EER 341
EER
Sbjct: 61 EER 63
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -1
Query: 328 RTRVLKRSFLRLAGSFRSFALNFSKL 251
RT L RSFL LAG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q8MPM9 Cluster: C-myb like protein; n=1; Euplotes
aediculatus|Rep: C-myb like protein - Euplotes
aediculatus
Length = 369
Score = 32.3 bits (70), Expect = 5.4
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +3
Query: 33 RYAGRKAIVVKXYXEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVN 212
R G K + G +D + F A + R+ RK++K + K + I+P K V
Sbjct: 101 RRFGNKWAEITTMLPGRTDNTVKNYFYATVRRHLRKLNKCLRAPKFCEAFNIEP--KQVK 158
Query: 213 YNHLMPTRYTVDFSFEKFSA---KDLKDPAKRKKLRFNTRVRFEER 341
N L+ + +F + SA K+L +K+K +N ++ EE+
Sbjct: 159 VNFLIDALELGNLNFFEISAIENKELIVLSKKKTGNYNKKMTSEEK 204
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 249 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 350
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 7.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 159 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 308
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_A7AN85 Cluster: Membrane protein, putative; n=1; Babesia
bovis|Rep: Membrane protein, putative - Babesia bovis
Length = 543
Score = 31.9 bits (69), Expect = 7.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 167 FILSHPLVHFPGVPVDTSDEGMPVWLV 87
F L H LV +P + DT DE M W V
Sbjct: 285 FALEHNLVQYPTINADTQDEAMAQWSV 311
>UniRef50_UPI00015BC654 Cluster: UPI00015BC654 related cluster; n=1;
unknown|Rep: UPI00015BC654 UniRef100 entry - unknown
Length = 394
Score = 31.5 bits (68), Expect = 9.4
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -3
Query: 308 QLLTFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHFPGV 129
+LLT +R+ E K + + + +++ + Y G +V +++ PLVHFP +
Sbjct: 145 KLLTLNRL--ELTEEAIKKDRKILFYLGAIGLLFGIGVEFYTGYIVGILVAFPLVHFPAL 202
Query: 128 PV 123
P+
Sbjct: 203 PL 204
>UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis
serovar tenebrionis|Rep: Helicase - Bacillus
thuringiensis subsp. tenebrionis
Length = 767
Score = 31.5 bits (68), Expect = 9.4
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 338 LFKTYSRVETQLLTFSRVFQV-FCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFI 162
LF+ Y + + LT + F ++FF+ E N I C + +I ++ R L L+ +
Sbjct: 445 LFREYDLQDYKSLTIHKTCASNFNSKFFRNEYNIIDCAYLIIDEVSMIPREILSKLLQAV 504
Query: 161 LSHPLVHFPG 132
SH + F G
Sbjct: 505 PSHVKIIFAG 514
>UniRef50_Q28MV9 Cluster: Putative uncharacterized protein; n=1;
Jannaschia sp. CCS1|Rep: Putative uncharacterized
protein - Jannaschia sp. (strain CCS1)
Length = 478
Score = 31.5 bits (68), Expect = 9.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 224 QVIIVYNLDERLYLGPLVDFILSHPLVHFPGVPVDTSDEGMPVWLVG 84
+ +++ LD + LVD + + P H P + D DE +W G
Sbjct: 125 EALVLSRLDATVPFQALVDGLSALPFAHLPQIDPDPEDEAAALWWTG 171
>UniRef50_Q7XM47 Cluster: OSJNBb0018J12.12 protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0018J12.12
protein - Oryza sativa subsp. japonica (Rice)
Length = 902
Score = 31.5 bits (68), Expect = 9.4
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1
Query: 310 RSFLRLAGSFRSFALNFSKL 251
RSFLRLAG +R F NFSK+
Sbjct: 568 RSFLRLAGYYRRFIENFSKI 587
>UniRef50_Q7XGB8 Cluster: Retrotransposon protein, putative,
Ty3-gypsy subclass; n=2; Oryza sativa|Rep:
Retrotransposon protein, putative, Ty3-gypsy subclass -
Oryza sativa subsp. japonica (Rice)
Length = 1264
Score = 31.5 bits (68), Expect = 9.4
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1
Query: 310 RSFLRLAGSFRSFALNFSKL 251
RSFLRLAG +R F NFSK+
Sbjct: 373 RSFLRLAGYYRRFIENFSKI 392
>UniRef50_Q4Y529 Cluster: Cholinephosphate cytidylyltransferase,
putative; n=2; Plasmodium chabaudi|Rep: Cholinephosphate
cytidylyltransferase, putative - Plasmodium chabaudi
Length = 853
Score = 31.5 bits (68), Expect = 9.4
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Frame = +3
Query: 84 SDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVK-------VVNYNHLMPTRYT 242
+DKP G F GID K H+ + H + +K F K ++ + + T
Sbjct: 259 TDKPLGTDFDQGIDIIRDKAHELFKLWRHHSKKLLKDFAKSFDPMITIIRKKNKKDSAST 318
Query: 243 VDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 365
+ S + + + K KK NT +E Y S W
Sbjct: 319 MYLSDSNVFLRTMSEHVKIKKSLSNTINNIDEYYYSVDEDW 359
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 31.5 bits (68), Expect = 9.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 3 PGQVVLVLSGRYAGRKAIVVKXYXEG 80
PGQV+++LSGR+ G++ + +K G
Sbjct: 60 PGQVLILLSGRFQGKRVVFLKQLKSG 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,720,429
Number of Sequences: 1657284
Number of extensions: 6864343
Number of successful extensions: 21506
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 20969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21484
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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