Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L14
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   124   9e-31
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  124 bits (298), Expect = 9e-31
 Identities = 61/108 (56%), Positives = 79/108 (73%)
 Frame = +2

Query: 350 QNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELS 529
           + + FQ E+ ++M LIIN+ Y NKEIFLRELISN SDALDKIR  SLT+   L++  EL 
Sbjct: 11  ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTNPSRLDSGKELY 70

Query: 530 IRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXMQDG 673
           I+I    +   L IID+G+GMT+ADL++NLGTIAKSGT  F+  +Q G
Sbjct: 71  IKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEALQAG 118


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 497 GQSATSDGSCPTHLNRSRSTRGGRSLYFCRAS 402
           GQ  T +G   +HLN +        LY C AS
Sbjct: 463 GQYVTVNGDVVSHLNITAIHTNDGGLYRCVAS 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,364
Number of Sequences: 336
Number of extensions: 2076
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)