Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L14
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 200 1e-51
SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10) 75 5e-14
SB_42397| Best HMM Match : rve (HMM E-Value=0.0007) 28 6.0
SB_33649| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 28 6.0
SB_59335| Best HMM Match : rve (HMM E-Value=0.0065) 28 7.9
SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05) 28 7.9
SB_30616| Best HMM Match : Pox_A32 (HMM E-Value=0.0095) 28 7.9
SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09) 28 7.9
SB_53423| Best HMM Match : Pox_A32 (HMM E-Value=0.0095) 28 7.9
SB_48456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_39424| Best HMM Match : Pox_A32 (HMM E-Value=0.033) 28 7.9
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.9
SB_23587| Best HMM Match : ERp29 (HMM E-Value=1.6e-06) 28 7.9
SB_13182| Best HMM Match : Pox_A32 (HMM E-Value=0.033) 28 7.9
SB_473| Best HMM Match : Ribosomal_60s (HMM E-Value=0.97) 28 7.9
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 200 bits (487), Expect = 1e-51
Identities = 97/136 (71%), Positives = 114/136 (83%)
Frame = +2
Query: 236 GSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYR 415
G SR+ SRTD EAV REEEAI D L+VAQMKELRD+A+ + FQ EVNRMMKLIINSLYR
Sbjct: 39 GKSRDASRTDDEAVQREEEAIKLDGLNVAQMKELRDKAEKHEFQAEVNRMMKLIINSLYR 98
Query: 416 NKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELSIRIKAEPDKRLLHIIDSGVGMT 595
NKEIFLRELISN SDALDKIRLMSLTD+ ++ ELSI+IKA+ + +LH+ D+G+GMT
Sbjct: 99 NKEIFLRELISNSSDALDKIRLMSLTDKTAFDSGDELSIKIKADKENNILHVTDTGIGMT 158
Query: 596 RADLINNLGTIAKSGT 643
+ +LI NLGTIAKSGT
Sbjct: 159 KEELIKNLGTIAKSGT 174
>SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)
Length = 739
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +2
Query: 371 EVNRMMKLIINSLYRN-KEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELSIRIKAE 547
+V ++L+++S ++F+RE+ISN SDAL+K+R LT + V E L I I+ +
Sbjct: 66 DVEEPLELLMSSQKTKLSQVFIREVISNASDALEKVRHFFLTGKDVSETETSLEIMIETD 125
Query: 548 PDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXMQD 670
+ I D+GVGMT +L+++LG IAKSG+ F+ +++
Sbjct: 126 QEAGTFTIQDNGVGMTEEELMDHLGVIAKSGSKVFMEKLKN 166
>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
Length = 729
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 239 SSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQ 352
+SR S+++ E A PDA +AQM +RD AQ
Sbjct: 418 TSRHPSQSNTEEKAPLCSASPPDAAEIAQMTAIRDTAQ 455
>SB_33649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS+ +G+A
Sbjct: 406 IALVERLLEEGAAGLPAVESLDCSTHPAGTA 436
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 239 SSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQ 352
+SR S+++ E A PDA +AQM +RD AQ
Sbjct: 420 TSRHPSQSNTEEKAPLCSASPPDAAEIAQMTAIRDTAQ 457
>SB_59335| Best HMM Match : rve (HMM E-Value=0.0065)
Length = 1020
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 382 IALVERLLEGGAAGLPAVESLGCSTQPAGAA 412
>SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05)
Length = 1081
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 418 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 448
>SB_30616| Best HMM Match : Pox_A32 (HMM E-Value=0.0095)
Length = 396
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL SA P ES+ CS++ +G+A
Sbjct: 195 IALVERLLEGSAAGPPAVESLGCSTQPAGTA 225
>SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09)
Length = 1069
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 576 SMMCSSRLSGSALMRMLSSGFASSTPRSVS 487
S+ C L + L M SGF SS PRS S
Sbjct: 535 SIRCEENLVYNPLTEMCESGFLSSPPRSSS 564
>SB_53423| Best HMM Match : Pox_A32 (HMM E-Value=0.0095)
Length = 1148
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL SA P ES+ CS++ +G+A
Sbjct: 462 IALVERLLEGSAAGPPAVESLGCSTQPAGTA 492
>SB_48456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 494 QSATSDGSCPTHLNRSRSTRGGRSLYF 414
QS S+GS PTH S ST R YF
Sbjct: 186 QSPFSNGSSPTHHGDSDSTDANRFTYF 212
>SB_39424| Best HMM Match : Pox_A32 (HMM E-Value=0.033)
Length = 1004
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 859 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 889
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 590 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 620
>SB_23587| Best HMM Match : ERp29 (HMM E-Value=1.6e-06)
Length = 83
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 284 EEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKE 424
+E+ S + V MK+++++ Y TE+ R+ KL+ + L NK+
Sbjct: 15 DEKGKSSGDMYVKIMKKIQEKGTGY-IDTEITRVKKLLKDKLTENKK 60
>SB_13182| Best HMM Match : Pox_A32 (HMM E-Value=0.033)
Length = 745
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 242 IALVERLLEGGAAGLPAVESLGCSTQPAGTA 272
>SB_473| Best HMM Match : Ribosomal_60s (HMM E-Value=0.97)
Length = 757
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 633 LAMVPRLLMRSARVMPTPESMMCSSRLSGSA 541
+A+V RLL A +P ES+ CS++ +G+A
Sbjct: 519 IALVERLLEGGAAGLPAVESLDCSTQPAGTA 549
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,271
Number of Sequences: 59808
Number of extensions: 276081
Number of successful extensions: 868
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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