Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L11
(515 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 125 5e-28
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 100 2e-20
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 99 5e-20
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 86 4e-16
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 80 3e-14
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 77 3e-13
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 70 4e-11
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 64 2e-09
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 61 2e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 58 9e-08
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 51 2e-05
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 50 3e-05
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 43 0.004
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 42 0.011
UniRef50_Q3HVN4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.14
UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;... 32 6.8
UniRef50_Q92QG2 Cluster: 50S ribosomal protein L29; n=16; Alphap... 32 6.8
UniRef50_Q5FTZ1 Cluster: 50S ribosomal protein L29; n=1; Glucono... 32 8.9
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 125 bits (302), Expect = 5e-28
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 100 bits (239), Expect = 2e-20
Identities = 56/123 (45%), Positives = 73/123 (59%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++C LR + + AL K+L+ K L LRV+KVTGG ASKLSK RVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q P+DLR KKTRA+R+ LT HE +++ K+ K R +A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 99.1 bits (236), Expect = 5e-20
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +3
Query: 6 LKVRFESHVP-VKMGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKX 182
+ VR ++ P + KV+ L K ++ L KQLE LK L+ LRV K+ G +SK +
Sbjct: 51 IPVRHDTKPPTMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRI 110
Query: 183 RVVRKAIARVYIVYHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKE 362
VRK+IARV V + PLDLR + TRA+R+ LTKHEA +KT K+
Sbjct: 111 HDVRKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQ 170
Query: 363 IRKKSLFPPRVYAVK 407
+K+ FP R YAVK
Sbjct: 171 RKKEIHFPQRKYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 86.2 bits (204), Expect = 4e-16
Identities = 50/121 (41%), Positives = 65/121 (53%)
Frame = +3
Query: 48 KVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYH 227
K++ LR K L K L+ LK L RV+KVT SKLSK +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 228 QKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 407
Q+ PL+LR K TRA RK LT + +KT KE ++ P R YA+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALL 141
Query: 408 A 410
A
Sbjct: 142 A 142
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 79.8 bits (188), Expect = 3e-14
Identities = 44/120 (36%), Positives = 66/120 (55%)
Frame = +3
Query: 48 KVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYH 227
K + LR + + L K LE LK L LR KV+ G A KL + +VRK IA+ V +
Sbjct: 5 KFKVKKLREQKPEDLVKDLEKLKGELIQLRTVKVSAGNAQKLGRIGLVRKRIAKFLTVIN 64
Query: 228 QKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 407
++ P+DLR KKTRA+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 65 EQRRNSVKNAAKSSTKLPVDLRGKKTRAIRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 76.6 bits (180), Expect = 3e-13
Identities = 46/124 (37%), Positives = 64/124 (51%)
Frame = +3
Query: 39 KMGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYI 218
K +Q L ++ L +++ LK L +LRV + TG +KLS+ VVRK IAR+
Sbjct: 3 KNSGLQIKQLISLSEEELTVKIDELKKELASLRVIQSTGTAPNKLSRINVVRKGIARILT 62
Query: 219 VYHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVY 398
+ Q+ PLDLR K TRA R+ALT +AK T K +K FP R +
Sbjct: 63 ILSQRNIKSLREKHAGSKFMPLDLRKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKF 122
Query: 399 AVKA 410
A+ A
Sbjct: 123 AIIA 126
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 76.6 bits (180), Expect = 3e-13
Identities = 43/103 (41%), Positives = 59/103 (57%)
Frame = +3
Query: 51 VQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYHQ 230
V+ L+ K + L KQLE LK L NLRV KV GG +SK+ + +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 231 KMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRK 359
K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 69.7 bits (163), Expect = 4e-11
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +3
Query: 66 LRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYHQKMXXX 245
LR K + L K L K L+ LRV + TGG ++L + R +RK+IAR+ V +Q
Sbjct: 10 LREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSN 69
Query: 246 XXXXXXXXX---XXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 407
P LR K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 70 LKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 63.7 bits (148), Expect = 2e-09
Identities = 42/121 (34%), Positives = 58/121 (47%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M V+ LR +K L +L+ LK L+ LR++K G A K SK VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
Y+QK P +LR K T+ R L+ + T ++ +K FP R Y
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 402 V 404
V
Sbjct: 120 V 120
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 60.9 bits (141), Expect = 2e-08
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +3
Query: 81 QKALFKQLEXLKPXLTNLRVAKVTGG-VASKLSKXRVVRKAIARVYIVYHQKMXXXXXXX 257
Q+ L ++L LK L +LR K T G V ++++ RV +K +ARV V +QK
Sbjct: 42 QEDLQRKLADLKRELLSLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAA 101
Query: 258 XXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 407
P R + T AMR LT+ + ++ K +++K FP YAVK
Sbjct: 102 FEGAEHIPKTFRPRLTHAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 58.4 bits (135), Expect = 9e-08
Identities = 40/106 (37%), Positives = 57/106 (53%)
Frame = +3
Query: 30 VPVKMGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIAR 209
V V M +++ LR + + L QL+ LK L+ LRVA+VTGG +KLS +V R A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIKV-RTALRE 162
Query: 210 VYIVYHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKI 347
Y + + PLDLR KKT A+R+ LTKH+ +
Sbjct: 163 AYKKKKKSLL-------------PLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 50.8 bits (116), Expect = 2e-05
Identities = 42/109 (38%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = -2
Query: 409 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 230
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 229 W*YTM*TRAIAFLTTRXLDSLEATPPVTLATRRFVNXGFSXS-SCLKSA 86
W T+ AIA T L SL PPVTLATR + F S C KSA
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATRSAASSDFKPSKDCFKSA 502
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 50.0 bits (114), Expect = 3e-05
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 48 KVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYH 227
K++ S LR K + ++ +K L LR K +G V + + + +K +AR V
Sbjct: 2 KIEASALRQLGIKQIEERAAEIKADLAALRQKKNSGDVGA--NDIKTAKKNLARALTVRR 59
Query: 228 QKMXXXXXXXXXXX--XXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+K+ P +LR K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 60 EKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 282 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 410
L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 58 LHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 41.5 bits (93), Expect = 0.011
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 279 PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 395
PLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 2 PLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q3HVN4 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 93
Score = 37.9 bits (84), Expect = 0.14
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAI 203
M +++ LR K + L QL+ LK L LRV KVT G +KLSK +V K +
Sbjct: 1 MARIKVHELRNKAKPDLLTQLKDLKAELGLLRVVKVT-GAPNKLSKIKVHGKVV 53
>UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 744
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 224 SPEDEGQSXKPLQKQEIQAFRFKSQEDP 307
SP+D+ QS KPL+ QEIQ +F + P
Sbjct: 480 SPKDDYQSSKPLESQEIQPQQFLKSKAP 507
>UniRef50_Q92QG2 Cluster: 50S ribosomal protein L29; n=16;
Alphaproteobacteria|Rep: 50S ribosomal protein L29 -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 66
Score = 32.3 bits (70), Expect = 6.8
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 51 VQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYHQ 230
++ + +R L ++L LK NLR K TG + K S+ VRK IAR+ + Q
Sbjct: 1 MKAADVRALSADQLKEELAKLKKEQFNLRFQKATGQL-EKSSRINEVRKDIARIKTIARQ 59
Query: 231 K 233
K
Sbjct: 60 K 60
>UniRef50_Q5FTZ1 Cluster: 50S ribosomal protein L29; n=1;
Gluconobacter oxydans|Rep: 50S ribosomal protein L29 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 77
Score = 31.9 bits (69), Expect = 8.9
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 66 LRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYHQ 230
LR K + L L LK N R + TG + S+ +VVR+A+AR+ + HQ
Sbjct: 10 LRAKSEDELNALLLDLKREQINHRFSAATGQ-SENTSRVKVVRRAVARIKTLAHQ 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,900,649
Number of Sequences: 1657284
Number of extensions: 4227418
Number of successful extensions: 12521
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12499
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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