Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L11
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   2.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 254 PLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQD 352
           P   +  +AF+ K   DP   +GSY  R  D++
Sbjct: 348 PQNAKTQKAFQVKRVPDPSKRKGSYIFRLPDEN 380


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 371 LSDLFPRLDLCFVFSKSLAH 312
           ++DL P  D C     +LAH
Sbjct: 56  ITDLDPSADYCLFLEMTLAH 75


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 224 SPEDEGQSXKPLQKQEI 274
           SP  +G   KP+ K+EI
Sbjct: 464 SPNVDGPDWKPISKEEI 480


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 224 SPEDEGQSXKPLQKQEI 274
           SP  +G   KP+ K+EI
Sbjct: 464 SPNVDGPDWKPISKEEI 480


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 224 SPEDEGQSXKPLQKQEI 274
           SP  +G   KP+ K+EI
Sbjct: 466 SPNVDGPDWKPISKEEI 482


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 297 WLLNLKACISCFCSG 253
           WL+N+ A   C+  G
Sbjct: 135 WLINISATYICYAFG 149


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 297 WLLNLKACISCFCSG 253
           WL+N+ A   C+  G
Sbjct: 368 WLINISATYICYAFG 382


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 297 WLLNLKACISCFCSG 253
           WL+N+ A   C+  G
Sbjct: 368 WLINISATYICYAFG 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,104
Number of Sequences: 336
Number of extensions: 1122
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)