Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L11
         (515 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0340 + 17946133-17946136,17946207-17946342,17946428-179465...    91   5e-19
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086...    58   3e-09
02_03_0406 + 18663986-18664059,18665082-18665405,18665499-186655...    28   5.1  
06_03_0730 - 23948801-23949079,23949528-23949588,23949828-239499...    27   6.8  

>02_03_0340 +
           17946133-17946136,17946207-17946342,17946428-17946584,
           17947330-17947458
          Length = 141

 Score = 91.1 bits (216), Expect = 5e-19
 Identities = 58/141 (41%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
 Frame = +3

Query: 42  MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
           M +++   LR K +  L  QL+ LK  L+ LRVAKVTGG  +KLSK +VVR +IARV  V
Sbjct: 1   MARIKVDELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60

Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKH------------------EAKI 347
             QK               PLDLR KKTRA+R+ LTKH                  +  +
Sbjct: 61  ISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLCYTCIRLLTFSMVAISQLSL 120

Query: 348 KTRKEIRKKSLFPPRVYAVKA 410
           KT +E +++  FP R YA+KA
Sbjct: 121 KTEREKKREKYFPMRKYAIKA 141


>06_03_1515 -
           30707600-30707613,30708093-30708167,30708596-30708647,
           30708751-30708831,30709145-30709219,30709870-30709977,
           30710026-30710032,30710133-30710268,30710361-30710685
          Length = 290

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 40/106 (37%), Positives = 57/106 (53%)
 Frame = +3

Query: 30  VPVKMGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIAR 209
           V V M +++   LR + +  L  QL+ LK  L+ LRVA+VTGG  +KLS  + VR A+  
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162

Query: 210 VYIVYHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKI 347
            Y    + +              PLDLR KKT A+R+ LTKH+  +
Sbjct: 163 AYKKKKKSL-------------LPLDLRPKKTCAIRRRLTKHQGML 195


>02_03_0406 +
           18663986-18664059,18665082-18665405,18665499-18665559,
           18666136-18666282,18666368-18666492,18666619-18666648,
           18666689-18666893,18667532-18667741,18667886-18667888,
           18670034-18670942,18671239-18672069
          Length = 972

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 242 DLHLLVIHNVNTCDSFSYNTXLGQFRSNSTSNFS-NPKIC 126
           +LH L   N++  D       +GQF +  TS+F+ NPK+C
Sbjct: 879 NLHFLSNFNISYNDLEGPVPTIGQFSTFPTSSFAGNPKLC 918


>06_03_0730 -
           23948801-23949079,23949528-23949588,23949828-23949954,
           23950449-23950485,23950987-23951061,23951489-23951598,
           23952700-23952754,23952833-23952949,23953201-23953355,
           23953577-23953634,23954239-23954460
          Length = 431

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 54  QCSXLRPKXQKALFKQLEXLKPXL 125
           +C+ L+ K QKAL+  LE LK  L
Sbjct: 72  ECTFLKHKDQKALYSALERLKEEL 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,346,359
Number of Sequences: 37544
Number of extensions: 117104
Number of successful extensions: 323
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)