Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L11
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 125 8e-29
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 125 8e-29
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 125 8e-29
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 125 8e-29
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 125 8e-29
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 125 8e-29
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 124 2e-28
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 71 3e-12
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 51 3e-06
BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein. 30 4.2
AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein. 30 4.2
AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal... 30 4.2
AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal... 30 4.2
AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal... 30 4.2
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 125 bits (302), Expect = 8e-29
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 125 bits (302), Expect = 8e-29
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 125 bits (302), Expect = 8e-29
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 125 bits (302), Expect = 8e-29
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 125 bits (302), Expect = 8e-29
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 125 bits (302), Expect = 8e-29
Identities = 67/123 (54%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
VKA
Sbjct: 121 VKA 123
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 124 bits (299), Expect = 2e-28
Identities = 66/123 (53%), Positives = 81/123 (65%)
Frame = +3
Query: 42 MGKVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIV 221
M K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMXXXXXXXXXXXXXXPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 401
+Q PLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 402 VKA 410
V+A
Sbjct: 121 VRA 123
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 70.5 bits (165), Expect = 3e-12
Identities = 37/61 (60%), Positives = 45/61 (73%)
Frame = +3
Query: 48 KVQCSXLRPKXQKALFKQLEXLKPXLTNLRVAKVTGGVASKLSKXRVVRKAIARVYIVYH 227
K++ LR K ++ L KQL+ LK L+ LRVAKVTGG ASKLSK RVVRK+IARV V +
Sbjct: 2 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 61
Query: 228 Q 230
Q
Sbjct: 62 Q 62
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 50.8 bits (116), Expect = 3e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 132 LRVAKVTGGVASKLSKXRVVRKAIARVYIVYHQ 230
LRVAKVTGG ASKLSK RVVRK+IARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein.
Length = 128
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 162 ASKLSKXRVVRKAIARVYIVYHQKMXXXXXXXXXXX----XXXPLDLRAKKTRAMRKALT 329
+S+ S RV R+A AR+Y V K P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 330 KHEAKIKTRKEIRKK 374
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein.
Length = 164
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 162 ASKLSKXRVVRKAIARVYIVYHQKMXXXXXXXXXXX----XXXPLDLRAKKTRAMRKALT 329
+S+ S RV R+A AR+Y V K P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 130
Query: 330 KHEAKIKTRKEIRKK 374
K EA++++RKE ++
Sbjct: 131 KREAQLQSRKEYEQE 145
>AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 164
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 162 ASKLSKXRVVRKAIARVYIVYHQKMXXXXXXXXXXX----XXXPLDLRAKKTRAMRKALT 329
+S+ S RV R+A AR+Y V K P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 130
Query: 330 KHEAKIKTRKEIRKK 374
K EA++++RKE ++
Sbjct: 131 KREAQLQSRKEYEQE 145
>AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 125
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 162 ASKLSKXRVVRKAIARVYIVYHQKMXXXXXXXXXXX----XXXPLDLRAKKTRAMRKALT 329
+S+ S RV R+A AR+Y V K P+DL R L
Sbjct: 32 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 91
Query: 330 KHEAKIKTRKEIRKK 374
K EA++++RKE ++
Sbjct: 92 KREAQLQSRKEYEQE 106
>AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 128
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 162 ASKLSKXRVVRKAIARVYIVYHQKMXXXXXXXXXXX----XXXPLDLRAKKTRAMRKALT 329
+S+ S RV R+A AR+Y V K P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 330 KHEAKIKTRKEIRKK 374
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,813,234
Number of Sequences: 237096
Number of extensions: 684203
Number of successful extensions: 1570
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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