Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L10
(615 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 5e-34
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 75 3e-14
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 33 0.24
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 29 3.0
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 28 6.9
SB_46808| Best HMM Match : Paramecium_SA (HMM E-Value=4.2) 28 6.9
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 27 9.1
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 27 9.1
SB_53084| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 27 9.1
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 27 9.1
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 141 bits (341), Expect = 5e-34
Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Frame = +1
Query: 1 TPMGSFRXXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVI 180
TP+GS A+ RA I ++ EV +G V +A GQ PARQA I
Sbjct: 18 TPVGSHNGDLSSLKAHELGSIVVKEALCRASISPCDVSEVILGQVLTAGQGQGPARQAAI 77
Query: 181 FAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYL-KRGET 357
AG+P VN +C SG+K++ L Q + G +I++AGG ESMS P R
Sbjct: 78 HAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAPHCCHMRPAL 137
Query: 358 SYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYEA 537
+G M L+D ++ DGL D +N +HMG AEN AK+ +++ ++QD +A+ S +R+ A +A
Sbjct: 138 KFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQQRTETAQKA 197
Query: 538 KAFVDELVPVPVPQKRG 588
F DE+V V + + G
Sbjct: 198 GYFSDEIVTVSIKTRAG 214
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/62 (53%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 433 GNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 609
G CAEN A K IT ++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 610 XE 615
E
Sbjct: 119 DE 120
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
Frame = +1
Query: 148 LGQAPARQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 294
+GQAPARQA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +1
Query: 367 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYEAKAF 546
G Q+ D + + GLTD+ MG AEN A+K IT ++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 547 VDELVPVPVPQKRGAPVIFAEXE 615
E+VPVPV K+G P FA E
Sbjct: 858 TAEIVPVPVKGKKG-PEQFAVDE 879
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 430 MGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYEAKAFVDEL 558
MG+ A+ A ++ Q+QDEYA+ S+ + A +A D L
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTDVL 55
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -1
Query: 375 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TLCCQ-HYRFHARGTYFVYSCTYGT 199
+HS+ R+ + RY H T + S+ TLC Q H R+ + T+ +YS T+
Sbjct: 102 MHSNTRTLCTKTHARYALKHTHTT-----MHSNTRTLCTQTHARYALKHTHTMYSNTHTL 156
Query: 198 FWQTCKYYSL 169
QT +Y+L
Sbjct: 157 CTQTHAHYAL 166
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = +1
Query: 382 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYE-------AK 540
DG+VFD ++ + M C+ N K + Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 541 AFVDELVPVPVPQKRGAPV 597
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 126 WQCLFCKFGPSTCKTSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 269
W+C K PS ++ + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 126 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCL 236
WQ + + GP KTSC +C KY++ N CL
Sbjct: 864 WQSNYTQCGPCASKTSCPVCNI--KYNL-NDLMIQCL 897
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 5.2
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +1
Query: 79 IERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 258
I + GI EEI +V A + + + G PKS +CT+VN+V G+ +
Sbjct: 72 IVKVGITTEEIDY----HVHKAIIEHGAYPSPLNYRGFPKS-VCTSVNEVAVHGIPNSRC 126
Query: 259 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 384
G + GG+ F + G G +LVD
Sbjct: 127 LQNGDLLSVDISLFYGGVHGDLCETFLV--GNVDESGRRLVD 166
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 410 SVSPSNTIPSTNCIPPYEVSP 348
+++PSNT+P TNC P E +P
Sbjct: 928 ALNPSNTVP-TNCCPSGETTP 947
>SB_46808| Best HMM Match : Paramecium_SA (HMM E-Value=4.2)
Length = 191
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 133 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 294
VCSA LG +PA+ V FA L T + SIM + +Q ++ +
Sbjct: 67 VCSAELGVSPAKLCVSFAELIIGDSLTVDQAKAQMAIWSIMASNNAIQVWSRPL 120
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +1
Query: 382 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYE-------AK 540
DG+ FD + + +M C+ N L Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 541 AFVDELVPVPVPQKRGAPVI 600
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 382 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYE-------AK 540
DG+ FD + D + M C+ N K + Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 541 AFVDELVPVPVPQKRGAPV 597
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_53084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 936
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 375 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TL-CCQHYRFHARGTYFVY 217
+H S+ +FT+L I R+ + L S L L Q Y FHAR F Y
Sbjct: 763 IHESVATFTALMIARHC-FSLEDVIYHVALPSLLAALPSVQLYGFHARSAIFRY 815
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 382 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYE-------AK 540
DG+ FD + + M C+ N K + Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 541 AFVDELVPVPVPQKRGAPV 597
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 382 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYE-------AK 540
DG+ FD + D + M C+ N K + Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 541 AFVDELVPVPVPQKRGAPV 597
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Frame = +1
Query: 382 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSAAAYE-------AK 540
DG+ FD + ++ M C+ N K + Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 541 AFVDELVPVPVPQKRGAPV 597
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,760,784
Number of Sequences: 59808
Number of extensions: 376792
Number of successful extensions: 1112
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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