Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L09
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    27   0.11 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    27   0.11 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    27   0.11 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    27   0.11 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    27   0.11 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    27   0.11 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           27   0.11 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    27   0.11 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    27   0.11 
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    25   0.44 
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    25   0.44 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   1.8  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.6  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 54  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 108


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 596 SCSLADCNTWATVCSPRGTSSVRSAARLT--IDVGSASNITPPSQISSKASITAS 438
           SC  AD  +   V SP+  S+  +  R T  +   S SN T  S ++S  S++ S
Sbjct: 98  SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 74  TQRWKVLCSNPHCTLSRGCAFWTMKETEFWPN-ITIKTSYPQLRSRRHL 217
           T+RW+ L  +    L +    WT +    W N +T +   P++ S R L
Sbjct: 18  TERWQRLSFDDEDNLPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFL 66


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 74  TQRWKVLCSNPHCTLSRGCAFWTMKETEFWPN-ITIKTSYPQLRSRRHL 217
           T+RW+ L  +    L +    WT +    W N +T +   P++ S R L
Sbjct: 18  TERWQRLSFDDEDNLPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFL 66


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 690 IFIFNGILNK*TFFYMYIVLKCFYSF 613
           IF  + +L    F+Y +I+L C Y F
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYF 116


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 579 LQYLGHCLLSQGHVLGAQRC 520
           +QY+ H L  Q +V+G + C
Sbjct: 79  MQYIQHPLPGQDYVIGQENC 98


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 579 LQYLGHCLLSQGHVLGAQRC 520
           +QY+ H L  Q +V+G + C
Sbjct: 79  MQYIQHPLPGQDYVIGQENC 98


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 579 LQYLGHCLLSQGHVLGAQRC 520
           +QY+ H L  Q +V+G + C
Sbjct: 79  MQYIQHPLPGQDYVIGQENC 98


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 579 LQYLGHCLLSQGHVLGAQRC 520
           +QY+ H L  Q +V+G + C
Sbjct: 79  MQYIQHPLPGQDYVIGQENC 98


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 579 LQYLGHCLLSQGHVLGAQRC 520
           +QY+ H L  Q +V+G + C
Sbjct: 79  MQYIQHPLPGQDYVIGQENC 98


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 564 HCLLSQGHVLGAQRCPAYDRRGISIQYHTAVADLI 460
           +C  + GH+LG+   P        I+Y   ++ LI
Sbjct: 24  NCHYTSGHLLGSSSLPLRSFYRSRIRYQGRISSLI 58


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 579 ISKGAT*MVLIEMNKNI*ARYTYKKM 656
           +SKG T  +  ++ KN+   Y  KK+
Sbjct: 78  VSKGTTLFMTSQIKKNVTRAYCNKKI 103


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 579 ISKGAT*MVLIEMNKNI*ARYTYKKM 656
           +SKG T  +  ++ KN+   Y  KK+
Sbjct: 78  VSKGTTLFMTSQIKKNVTRAYCNKKI 103


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 592 APLLIAIPGPLFALPGARPRCAALPG 515
           AP +    G    LPG   RC   PG
Sbjct: 34  APSICGEHGHCVNLPGVGHRCQCQPG 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,346
Number of Sequences: 336
Number of extensions: 3673
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)