Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L09
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein comple... 242 1e-63
AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein. 242 1e-63
AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein. 242 1e-63
AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein. 242 1e-63
AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein comple... 240 4e-63
BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein comple... 211 2e-54
AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein. 211 2e-54
AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protei... 211 2e-54
CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein. 39 0.019
AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein... 39 0.019
AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin adaptor-r... 39 0.019
AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein. 31 5.2
AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein. 30 6.8
CR456785-1|CAG33066.1| 493|Homo sapiens ARIH2 protein. 30 9.0
BC000422-1|AAH00422.1| 493|Homo sapiens ariadne homolog 2 (Dros... 30 9.0
AK223550-1|BAD97270.1| 493|Homo sapiens ariadne homolog 2 varia... 30 9.0
AJ130978-1|CAA10276.1| 493|Homo sapiens Ariadne-2 protein (ARI2... 30 9.0
AF183427-1|AAG09696.1| 481|Homo sapiens HT005 protein protein. 30 9.0
AF099149-1|AAC82469.1| 493|Homo sapiens TRIAD1 type I protein. 30 9.0
>BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 protein.
Length = 177
Score = 242 bits (592), Expect = 1e-63
Identities = 111/177 (62%), Positives = 147/177 (83%)
Frame = +1
Query: 85 EGSLFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 264
E + EP+LY VK ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 265 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 444
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 445 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein.
Length = 177
Score = 242 bits (592), Expect = 1e-63
Identities = 111/177 (62%), Positives = 147/177 (83%)
Frame = +1
Query: 85 EGSLFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 264
E + EP+LY VK ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 265 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 444
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 445 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein.
Length = 177
Score = 242 bits (592), Expect = 1e-63
Identities = 111/177 (62%), Positives = 147/177 (83%)
Frame = +1
Query: 85 EGSLFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 264
E + EP+LY VK ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 265 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 444
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 445 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein.
Length = 177
Score = 242 bits (592), Expect = 1e-63
Identities = 111/177 (62%), Positives = 147/177 (83%)
Frame = +1
Query: 85 EGSLFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 264
E + EP+LY VK ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 265 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 444
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEG 120
Query: 445 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 variant protein.
Length = 177
Score = 240 bits (587), Expect = 4e-63
Identities = 110/177 (62%), Positives = 146/177 (82%)
Frame = +1
Query: 85 EGSLFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEII 264
E + EP+LY VK ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 2 EALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIA 60
Query: 265 MLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDA 444
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+ +LR+N+E+R L+EN++
Sbjct: 61 LLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLRQMLRKNVEKRALLENMEG 120
Query: 445 VMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
+ LA DEI DGGVIL++DP +V R ALR EDVPL EQTV+QVLQSA+EQ+KWSLL+
Sbjct: 121 LFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 177
>BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein complex,
subunit zeta 2 protein.
Length = 210
Score = 211 bits (516), Expect = 2e-54
Identities = 99/174 (56%), Positives = 131/174 (75%)
Frame = +1
Query: 94 LFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 273
L EP+LY +K ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 274 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 453
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 454 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
DEI DGGVIL++DP ++ + R +D L EQ+VAQVLQSA+EQ+KWSLLK
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein.
Length = 210
Score = 211 bits (516), Expect = 2e-54
Identities = 99/174 (56%), Positives = 131/174 (75%)
Frame = +1
Query: 94 LFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 273
L EP+LY +K ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 274 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 453
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 454 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
DEI DGGVIL++DP ++ + R +D L EQ+VAQVLQSA+EQ+KWSLLK
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protein
zeta-COP protein.
Length = 210
Score = 211 bits (516), Expect = 2e-54
Identities = 99/174 (56%), Positives = 131/174 (75%)
Frame = +1
Query: 94 LFEPTLYIVKGXCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 273
L EP+LY +K ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 274 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 453
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 454 AFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK 615
DEI DGGVIL++DP ++ + R +D L EQ+VAQVLQSA+EQ+KWSLLK
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein.
Length = 144
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 115 IVKGXCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 291
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 292 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 471
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 472 DGGVILDADPTSIVS 516
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein
complex AP-4 sigma4 subunit protein.
Length = 144
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 115 IVKGXCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 291
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 292 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 471
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 472 DGGVILDADPTSIVS 516
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin
adaptor-related complex sigma4 subunit protein.
Length = 144
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +1
Query: 115 IVKGXCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 291
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 292 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 471
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 472 DGGVILDADPTSIVS 516
G I++ + I++
Sbjct: 119 LNGCIVETNRARILA 133
>AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein.
Length = 154
Score = 30.7 bits (66), Expect = 5.2
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +1
Query: 145 EGNRILAKYYDKDVLPTTKEQKAFEKNL----FNKTHRANAEIIMLDGLTCVYKSNVDLF 312
+G L K+Y LP KE+K + + ++ HR ++ + + L VYK L+
Sbjct: 11 QGKLRLQKWYI--TLPD-KERKKITREIVQIILSRGHRTSSFVDWKE-LKLVYKRYASLY 66
Query: 313 FYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVILD 492
F + +NEL+ +++ E + E ++ N + DE GG I +
Sbjct: 67 FCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIF-NFEKAYFILDEFIIGGEIQE 125
Query: 493 ADPTSIVSRAALRTEDVPLGEQTVAQVL 576
V A+ D+ TV+Q +
Sbjct: 126 TSKKIAVK--AIEDSDMLQEVSTVSQTM 151
>AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein.
Length = 811
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 445 VMLAFDEICDGGVILDA--DPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQL 597
V + + + GG+ + A PT+ VS A+ + +PLG Q +AQV QS+ L
Sbjct: 406 VQMITEALAQGGMHIRARFPPTTAVS--AIPSSSIPLGRQPMAQVSQSSLPML 456
>CR456785-1|CAG33066.1| 493|Homo sapiens ARIH2 protein.
Length = 493
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 498 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 337
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 336 M*TSH 322
+ H
Sbjct: 154 LACQH 158
>BC000422-1|AAH00422.1| 493|Homo sapiens ariadne homolog 2
(Drosophila) protein.
Length = 493
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 498 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 337
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 336 M*TSH 322
+ H
Sbjct: 154 LACQH 158
>AK223550-1|BAD97270.1| 493|Homo sapiens ariadne homolog 2 variant
protein.
Length = 493
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 498 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 337
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 336 M*TSH 322
+ H
Sbjct: 154 LACQH 158
>AJ130978-1|CAA10276.1| 493|Homo sapiens Ariadne-2 protein (ARI2)
protein.
Length = 493
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 498 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 337
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 336 M*TSH 322
+ H
Sbjct: 154 LACQH 158
>AF183427-1|AAG09696.1| 481|Homo sapiens HT005 protein protein.
Length = 481
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 498 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 337
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 81 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 140
Query: 336 M*TSH 322
+ H
Sbjct: 141 LACQH 145
>AF099149-1|AAC82469.1| 493|Homo sapiens TRIAD1 type I protein.
Length = 493
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -3
Query: 498 ISIQYHTAVADLIEG-KHNSIQVLHE-----DPPLHVPS*QQTNRLVECIQY*LKDQLIF 337
I + +H V+++++ K NS Q+L E +P HVP+ + C+Q+ K+ L+
Sbjct: 94 ILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLS 153
Query: 336 M*TSH 322
+ H
Sbjct: 154 LACQH 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,879,054
Number of Sequences: 237096
Number of extensions: 2175710
Number of successful extensions: 5205
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5197
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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