Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L08
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.7  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 242 LHSQHGRQLHH 210
           LHS HG  +HH
Sbjct: 89  LHSHHGPPIHH 99


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 242 LHSQHGRQLHH 210
           LHS HG  +HH
Sbjct: 89  LHSHHGPPIHH 99



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 572 SDSHPEGVGMEPRAIHPGMKFSIT 643
           S +HP    M P  +H GM  S+T
Sbjct: 362 SHAHPMHHDMLPETMHMGMGPSLT 385


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 242 LHSQHGRQLHH 210
           LHS HG  +HH
Sbjct: 89  LHSHHGPPIHH 99



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 572 SDSHPEGVGMEPRAIHPGMKFSIT 643
           S +HP    M P  +H GM  S+T
Sbjct: 362 SHAHPMHHDMLPETMHMGMGPSLT 385


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 242 LHSQHGRQLHH 210
           LHS HG  +HH
Sbjct: 89  LHSHHGPPIHH 99


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 165 LMAPSFSYHSTLHSVLILTXFSIEPXS*SXWS 70
           L+ P F +HS + SVL     S  P   + W+
Sbjct: 93  LITPLFFFHSFMTSVLFSQVASRWPLFLNEWT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,409
Number of Sequences: 336
Number of extensions: 3884
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)