Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L05
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   5.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   6.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   8.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 76  RPPTSKQHLSTH 111
           RP T K HL TH
Sbjct: 5   RPSTLKTHLRTH 16


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 76  RPPTSKQHLSTH 111
           RP T K HL TH
Sbjct: 261 RPSTLKTHLRTH 272


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 297 TGEGAFGALVVPLVDPLIGAERP 229
           TG G   A ++P++  L+  + P
Sbjct: 204 TGSGKTAAFMLPIIHNLLSDKNP 226


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 316 VPDALIYFDLF 348
           VP  L+YFD+F
Sbjct: 223 VPRVLMYFDIF 233


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 200 NHATISRECTGLSAPMSGSTSGTTSA 277
           ++ T  +  TGL+AP+ G++    S+
Sbjct: 203 DYHTADQPQTGLNAPLYGNSMSVDSS 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,385
Number of Sequences: 336
Number of extensions: 2044
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)