Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L05
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 53 1e-07
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 30 0.63
AC024777-4|AAF60561.3| 627|Caenorhabditis elegans Hypothetical ... 30 0.63
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 30 0.83
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 30 0.83
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 30 0.83
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 30 0.83
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 29 1.5
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 1.5
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 29 1.5
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 28 2.5
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 28 2.5
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 27 4.4
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 52.8 bits (121), Expect = 1e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 172 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGR 300
C ++ G+ Y+PC +F+ VY+ CP W ++WD +EG F +
Sbjct: 76 CNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFPAK 118
Score = 40.7 bits (91), Expect = 4e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 87 LKTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRKIRTMLLFQ 218
L AP+D RFP + R C+ YVDFHR E + + FQ
Sbjct: 48 LWAAPYDARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQ 91
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 30.3 bits (65), Expect = 0.63
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 53 NMP-EXDQIARRPQNSTFRPTVP*PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECT 229
NMP D ++ +N T +P P++ LP LPP +KN+ +T+ R+
Sbjct: 414 NMPIRVDSSTKKMRNDTV--CIPPPETATVALPN--SLPPITVSARSKNSRKSTLKRKKK 469
Query: 230 GLSAPMSGSTSGTTSAPKAPSPVG 301
S S +T+ T + P G
Sbjct: 470 KTSKDSSMTTTTTNTNESEPPADG 493
>AC024777-4|AAF60561.3| 627|Caenorhabditis elegans Hypothetical
protein Y42H9AR.4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 0.63
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = +2
Query: 101 FRPTVP*PKSDEALLP---------KLRGLPPXARKFAAKNTNHATISRECTGLSAPMSG 253
F+ V P SDEAL + R PP +R+ + + + S++ + + +S
Sbjct: 195 FKEIVLDPYSDEALQKYFVNEPWKYRKRAPPPASRRKSLNTSLNGKNSKKVSISNEVISP 254
Query: 254 STSGTTSAPKAPSPVGFR 307
+T+GT SAP+ S G+R
Sbjct: 255 TTNGTRSAPRKASLAGYR 272
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.9 bits (64), Expect = 0.83
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 113 VP*PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPS 292
+P P DE KLR P RK ++ + T SR+ + SG+T + SA A S
Sbjct: 305 LPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.9 bits (64), Expect = 0.83
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 113 VP*PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPS 292
+P P DE KLR P RK ++ + T SR+ + SG+T + SA A S
Sbjct: 305 LPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.9 bits (64), Expect = 0.83
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 113 VP*PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPS 292
+P P DE KLR P RK ++ + T SR+ + SG+T + SA A S
Sbjct: 305 LPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.9 bits (64), Expect = 0.83
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 113 VP*PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPS 292
+P P DE KLR P RK ++ + T SR+ + SG+T + SA A S
Sbjct: 305 LPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 122 PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 301
P+ A PK P A+K A A S+ + +SAP + + + T+SAP A +P
Sbjct: 381 PRGAPAKAPKAE---PIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-ATAPEA 436
Query: 302 FR 307
R
Sbjct: 437 SR 438
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 29.1 bits (62), Expect = 1.5
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 80 RRPQNSTFRPTVP*PKSDEALLPKLRG-LPPXARKFAAKNTNHATISRECTGLSAPMSGS 256
RRP N+T P+ + A + K+ PP AR + A + LSA S +
Sbjct: 605 RRPLNNTEVPSPVTYRKISAPVQKVTSPAPPAARSVSTDQPPPANRRSQVGILSATSSKA 664
Query: 257 TSGTTSAPKAPSPVG 301
T TSA P P G
Sbjct: 665 TVTVTSATSPPYPKG 679
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 167 PXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 328
P +K + +H+ + ++ + ++ AP APSP F FP L
Sbjct: 691 PLPQKPKIETNHHSAVEKDAEKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 744
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 167 PXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 328
P +K + +H+ + ++ + ++ AP APSP F FP L
Sbjct: 593 PLPQKPKIETNHHSAVEKDAEKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 646
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 388 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 239
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 388 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 239
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 388 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 239
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 388 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 239
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 122 PKSDEALLPKLRGLPPXARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 301
PK+ + LP LP +K +A T ISR L + S S T A ++ VG
Sbjct: 547 PKNPDPSLPNSEALPTRRQKISAAWTADDDISRLLMSLPNWHAASISPMTPAVESELDVG 606
Query: 302 FRS 310
R+
Sbjct: 607 ERN 609
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,920,788
Number of Sequences: 27780
Number of extensions: 180440
Number of successful extensions: 625
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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