Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_L04
         (778 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0695 + 5730932-5731198                                           33   0.33 
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    29   4.1  
05_04_0286 + 19833114-19834053,19834149-19834165                       29   4.1  
04_04_1152 - 31289365-31289457,31289559-31289637,31289716-312897...    29   5.4  
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933...    28   7.2  
02_04_0381 - 22497519-22497769,22498157-22498247                       28   7.2  
04_03_1035 - 21887562-21890030                                         28   9.5  
03_02_0883 - 12142550-12142663,12142723-12142782,12142954-12143229     28   9.5  

>11_01_0695 + 5730932-5731198
          Length = 88

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 169 PADLQLLQDVGKRACVRRGGNCDHRPGDCCHSSSCRCNL---WGSNC 300
           P  + ++    K AC+  GG C  RP DCC +  C   +   +GS C
Sbjct: 40  PRLMDVVSAESKLACLPAGGFCMFRPMDCCGNCGCLYPVGVCYGSRC 86


>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +1

Query: 112  YIDP-GDDDLEVNLPDYGEDPADLQLLQD 195
            +++P  D+ +E   PDY EDP +++L +D
Sbjct: 1193 HVEPVADEKMEDEEPDYEEDPEEVELYED 1221


>05_04_0286 + 19833114-19834053,19834149-19834165
          Length = 318

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +1

Query: 208 ACVRRGGNCDHRPGDCCHSSSCRCNLWGSNCRC 306
           AC   GG C H  GD  H   C C  W S   C
Sbjct: 254 ACRATGGVCGH-DGDS-HGDLCLCGDWNSTSNC 284


>04_04_1152 -
           31289365-31289457,31289559-31289637,31289716-31289758,
           31289846-31290037,31290302-31290377,31290482-31290535,
           31291274-31291342,31291437-31291700
          Length = 289

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +3

Query: 381 SQPT*PPLHRKPQHSPTQNGPVAFLFSRSIPSHSP*LFKQFNLVKF---KLKNRDFLDFS 551
           S PT PP HR     P  +G   F  +R+  S+        N+ +F   K    D L  +
Sbjct: 206 SAPTSPPQHRSFAGRPRIDGKEFFRQARTRLSYEQFGAFLANIKEFNAQKQSREDTLSKA 265

Query: 552 FEIF-LEHL*IYKNFENEIRFN 614
            EIF  EH  +Y +F+N +  N
Sbjct: 266 EEIFGTEHKDLYISFQNMLNRN 287


>05_06_0051 -
           25190803-25191216,25191301-25191891,25193248-25193317,
           25193392-25193443,25195368-25195440,25195557-25195646
          Length = 429

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 378 SSQPT*PPLHRKPQHSP 428
           +S P  PPLHR P+H P
Sbjct: 167 ASPPVPPPLHRNPRHRP 183


>02_04_0381 - 22497519-22497769,22498157-22498247
          Length = 113

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
 Frame = +1

Query: 121 PGDDDLEVNLPDYGEDPADLQLLQDVGKRACVRRGGNCDHRPGDCCH------SSSCRCN 282
           P  +D   + PD+ ++P         GK    +  G CD   GDC H        SC C+
Sbjct: 46  PDHEDPSPSPPDHEDEPPPPS---SPGKEDVCKGKGCCDWSGGDCKHYCDGYDDKSC-CD 101

Query: 283 LWGSNC 300
            W  +C
Sbjct: 102 DWSGDC 107


>04_03_1035 - 21887562-21890030
          Length = 822

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PGDCCHSSSCRCNLW-GSNCRCQRMG 318
           PG C  S SC C +W GS   C   G
Sbjct: 327 PGPCAPSKSCSCGVWSGSAQLCAGSG 352


>03_02_0883 - 12142550-12142663,12142723-12142782,12142954-12143229
          Length = 149

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 431 CWRMLWLPVERRSSRLAGVGRRFRG 357
           C ++LW+   RR++RL G GRR  G
Sbjct: 55  CGQLLWVLGFRRAARLGGQGRRPAG 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,926,909
Number of Sequences: 37544
Number of extensions: 366054
Number of successful extensions: 1114
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)