BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_L04
(778 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 25 3.5
DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein. 24 6.0
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.6 bits (51), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 229 NCDHRPGDCCHSSSCRCNLWGSNCRCQRMGLF 324
+CD G C SC+ N+ G +CR R+G F
Sbjct: 457 SCDPVTGVC----SCKENVEGRHCRECRLGYF 484
>DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein.
Length = 434
Score = 23.8 bits (49), Expect = 6.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 109 SYIDPGDDDLEVNLP--DYGEDPADLQLLQDVGKRACVRRG 225
S +D DD++EV+LP ++ D + +L +G R G
Sbjct: 314 SLVDFDDDEVEVHLPKFEFNSDYNLIPILNQMGIREAFDSG 354
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,012
Number of Sequences: 2352
Number of extensions: 12141
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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