Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_K13
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 327 1e-90
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 183 2e-47
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 182 6e-47
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 155 5e-39
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 30 0.39
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.39
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 29 0.51
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.90
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.1
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 2.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.1
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 3.6
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 26 4.8
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 8.4
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 25 8.4
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.4
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 25 8.4
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 25 8.4
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 327 bits (803), Expect = 1e-90
Identities = 148/223 (66%), Positives = 175/223 (78%)
Frame = +2
Query: 53 LGAKFWXLISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 232
+GA FW I+D HG+D G YHG S+ Q ER+NVY+NEA+GGKYVPRA+LVDLEPGTMD+
Sbjct: 16 VGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYVPRAVLVDLEPGTMDA 75
Query: 233 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQX 412
V+SG FG +FRPDN ++GQSGAGN WAKGHYTEGAEL D+VLDVVR+E+E+CD LQGFQ
Sbjct: 76 VKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQL 135
Query: 413 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 592
KIREEYPDR+M T+SV P+PK SDTVVEPYNATLS+HQLVEN
Sbjct: 136 THSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVEN 195
Query: 593 TDETYCIDNEALYDICFRTLKLSTPTYGDLNHLXSLTMSGVTT 721
+DET+CIDNEAL I TLK+ +P+Y DLNHL S M+GVTT
Sbjct: 196 SDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTT 238
Score = 33.5 bits (73), Expect = 0.032
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 7 MRXIVHLQAGQCGNQ 51
MR IVH+QAGQCGNQ
Sbjct: 1 MREIVHIQAGQCGNQ 15
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 183 bits (446), Expect = 2e-47
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Frame = +2
Query: 53 LGAKFWXLISDXHGIDPTG------AYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 214
+G W L HGI P G H ++ + +++E GK+VPR+I VDLE
Sbjct: 16 IGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLE 75
Query: 215 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 394
P +D VR+GP+ +F P+ V G+ A NN+A+GHYT G E++DSVL+ +R+ +++C
Sbjct: 76 PNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSG 135
Query: 395 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 574
LQGF ++ EY + +SV P+P+VS +VVEPYN+ L+
Sbjct: 136 LQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTT 195
Query: 575 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLXSLTMSGVTTCL 727
H ++N+D T+ +DNEA YDIC R L + PTY +LN L + +S +T L
Sbjct: 196 HATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLNRLIAQVVSSITASL 246
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 182 bits (442), Expect = 6e-47
Identities = 87/229 (37%), Positives = 130/229 (56%), Gaps = 2/229 (0%)
Frame = +2
Query: 47 TSLGAKFWXLISDXHGIDPTGAYHGDSDLQLER--INVYYNEASGGKYVPRAILVDLEPG 220
T +G W L HGI P G + ++ Q + +++E GKYVPR+I VDLEP
Sbjct: 14 TQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPN 73
Query: 221 TMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ 400
+D VR+GP+ +F P+ + G+ A NN+A+GHYT G ELVD V D +R+ +++C LQ
Sbjct: 74 VIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQ 133
Query: 401 GFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQ 580
GF ++ EY + +SV P+P+VS +VVEPYN+ L+ H
Sbjct: 134 GFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHA 193
Query: 581 LVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLXSLTMSGVTTCL 727
++ D T+ +DNE+ YDIC R L + P+Y +LN L + +S +T L
Sbjct: 194 TLDLADCTFMVDNESCYDICRRNLDIERPSYENLNRLIAQVVSSITASL 242
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 155 bits (377), Expect = 5e-39
Identities = 76/228 (33%), Positives = 125/228 (54%), Gaps = 3/228 (1%)
Frame = +2
Query: 53 LGAKFWXLISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDS 232
+G++FW + HGI P G + ++R +V++ ++ +Y+PRAIL+DLEP +++
Sbjct: 17 IGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIPRAILIDLEPRVVNN 76
Query: 233 VRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 406
+ S +G ++ P+N + ++ GAGNNWA G Y+ + + ++D++ +E++ D L+GF
Sbjct: 77 ILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGF 135
Query: 407 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP-SPKVSDTVVEPYNATLSVHQL 583
++ + YP +I+ TYSV P S VSD VV+PYN+ L++ +L
Sbjct: 136 SLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRL 195
Query: 584 VENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLXSLTMSGVTTCL 727
N D +DN AL I L PT+ N L S MS TT L
Sbjct: 196 TLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTL 243
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 10 RXIVHLQAGQCGNQ 51
R I+ LQAGQCGNQ
Sbjct: 3 REIITLQAGQCGNQ 16
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 29.9 bits (64), Expect = 0.39
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +3
Query: 312 PRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPT 491
PR++T++ L S++ S S+ Q + +S L+ PS AP P + SSS T
Sbjct: 219 PRESTEKPLLSVSALSS-SSHLQPTSATSSSSRLY-PSRPAPTPPASSSSSPLLSSQTVK 276
Query: 492 ES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRL 626
+ ++ P P + S+++ +R S L QT T+ T +
Sbjct: 277 TTTSNASRQPSPLVSSKSTDNIIR-SHSPVLLTPQTLSTSETKHI 320
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.39
Identities = 30/96 (31%), Positives = 45/96 (46%)
Frame = +3
Query: 402 ASNLHIPSVAAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS 581
+S+L P + P + SS+ + T T S T T SP P T + T + +S
Sbjct: 184 SSSLSTP-ITPTVPPTSTSSTSIPIPPTSTSS-TDTNSSPLPTTSTSCTTSTSIPTGGSS 241
Query: 582 *LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 689
L T PT T +TS++++ P PPT T +T
Sbjct: 242 SLSTPITPTVPPT---STSSTSI---PIPPTSTSST 271
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 29.5 bits (63), Expect = 0.51
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 591 TQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 689
T T +T + TTS S ++CP P T+ + T
Sbjct: 166 TSTSCNPATVLIVTTSGSTSTSCPPPTTILIVT 198
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 0.90
Identities = 24/102 (23%), Positives = 53/102 (51%)
Frame = +3
Query: 339 SSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPTES*THTQ*S 518
SS T ++ S+ + + + + +S+ S ++ + SSS S S+ + S + + S
Sbjct: 147 SSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 206
Query: 519 PRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSAS 644
P + SS+H+ S +S + ++P++S++ + T S+S
Sbjct: 207 SVPITSSTSSSHSSSSSSSSS-SSSSSRPSSSSSFITTMSSS 247
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 2.1
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +3
Query: 336 LSSLTRSSM*SAKNQNLAIAYRASNLHIPSVA--APGPVWAPSSSQRSVKSTPTES*THT 509
L+S T SS+ S+ + + S+ S A + + SSS S S+P+ S + T
Sbjct: 170 LTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSST 229
Query: 510 Q*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTT 689
S ++ S + S +S + + TAS++ ++ S+ S+ PT T +T
Sbjct: 230 LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSST 289
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 311 AKGHYTEGAELVDSVLDVVRKESESCDCLQ 400
A+GH G ELV + D +RK+SE+ L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 135 SWSASMYTTMKPPAASTCPAPFSSTWSPAPWTLSA 239
S +AS PP A+ + SST SPAPW A
Sbjct: 396 SGAASPQAGHPPPWAAASTSVSSSTSSPAPWAKPA 430
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 GPFGQIFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 343
GP+G +F P F+F +G NW+ Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 384 LAIAYRASNLHIPSVAAPGPVWAPSSSQRSVK 479
LA+ Y + + +V APG +W+P+ +R K
Sbjct: 159 LAVRYGPLGIRV-NVCAPGTIWSPAWDERFKK 189
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 141 SASMYTTMKPPAASTCPAPFSSTWSPAP 224
S S T P +A+T P P S+T P P
Sbjct: 560 SGSATTIPSPGSATTKPTPGSATTKPTP 587
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2
Query: 263 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 394
RP +F G++ G + E D ++ + + ESCDC
Sbjct: 955 RPSRLIF-YDNCGDSSGAGLCNKAYEHTDELITMAIERIESCDC 997
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 8.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +3
Query: 423 SVAAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTK 602
S A P SSS S STP S + S SS+ + S ++ KT +
Sbjct: 145 STATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSADAKTVSA 204
Query: 603 PTASTTRLYTTSASALSN 656
+ ST ++TS ++ S+
Sbjct: 205 SSNSTISGFSTSTTSASS 222
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 300 PAPDCPKTKLSGRKICPKGPERTESMVPGSKS 205
P+ PK L R I P GPE + + GS S
Sbjct: 20 PSTPPPKEVLHTRVIVPNGPEEIKLRLVGSHS 51
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 525 PKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPH 665
PK T H +S T +K+ S+TRL + S S PH
Sbjct: 664 PKTNTEGLMHAQSVSPITQAMKSANVLEGSSTRLNSYEPSVSSAYPH 710
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,918,452
Number of Sequences: 5004
Number of extensions: 60030
Number of successful extensions: 238
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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