Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_K10
         (488 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018024-1|AAH18024.1|  139|Homo sapiens trafficking protein par...   104   1e-22
BC011369-1|AAH11369.1|  139|Homo sapiens trafficking protein par...   104   1e-22
BC105809-1|AAI05810.1|  140|Homo sapiens trafficking protein par...   101   1e-21
AF089106-1|AAF00568.1|  140|Homo sapiens unknown protein.             101   1e-21
AK126779-1|BAC86686.1|  177|Homo sapiens protein ( Homo sapiens ...    96   5e-20

>BC018024-1|AAH18024.1|  139|Homo sapiens trafficking protein
           particle complex 2-like protein.
          Length = 139

 Score =  104 bits (250), Expect = 1e-22
 Identities = 51/123 (41%), Positives = 78/123 (63%)
 Frame = +2

Query: 2   LSRQWLVHTALDALEEXLTTANPNNSGTNTTTARTDLRDLYLGLLFSTDTHKIYGYVTNT 181
           L   ++VHT+LD ++E ++             A  D R+LYLGLL+ T+ +K+YGYVTN+
Sbjct: 26  LKFHYMVHTSLDVVDEKISAMGK---------ALVDQRELYLGLLYPTEDYKVYGYVTNS 76

Query: 182 RIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYADAICNPFHLPGDQITSPKFDKQVKN 361
           ++K V+V  S   S + +RD E+R+  R+LH  Y D +CNPF+ PGD+I S  FD  V +
Sbjct: 77  KVKFVMVVDS---SNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDNMVTS 133

Query: 362 IML 370
           +M+
Sbjct: 134 MMI 136


>BC011369-1|AAH11369.1|  139|Homo sapiens trafficking protein
           particle complex 2-like protein.
          Length = 139

 Score =  104 bits (250), Expect = 1e-22
 Identities = 51/123 (41%), Positives = 78/123 (63%)
 Frame = +2

Query: 2   LSRQWLVHTALDALEEXLTTANPNNSGTNTTTARTDLRDLYLGLLFSTDTHKIYGYVTNT 181
           L   ++VHT+LD ++E ++             A  D R+LYLGLL+ T+ +K+YGYVTN+
Sbjct: 26  LKFHYMVHTSLDVVDEKISAMGK---------ALVDQRELYLGLLYPTEDYKVYGYVTNS 76

Query: 182 RIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYADAICNPFHLPGDQITSPKFDKQVKN 361
           ++K V+V  S   S + +RD E+R+  R+LH  Y D +CNPF+ PGD+I S  FD  V +
Sbjct: 77  KVKFVMVVDS---SNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDNMVTS 133

Query: 362 IML 370
           +M+
Sbjct: 134 MMI 136


>BC105809-1|AAI05810.1|  140|Homo sapiens trafficking protein
           particle complex 2-like protein.
          Length = 140

 Score =  101 bits (243), Expect = 1e-21
 Identities = 51/124 (41%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   LSRQWLVHTALDALEEXLTTANPNNSGTNTTTARTDLRDLYLGLLFSTDTHKIYGYVTNT 181
           L   ++VHT+LD ++E ++             A  D R+LYLGLL+ T+ +K+YGYVTN+
Sbjct: 26  LKFHYMVHTSLDVVDEKISAMGK---------ALVDQRELYLGLLYPTEDYKVYGYVTNS 76

Query: 182 RIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYADAICNPFHLPGDQITSPK-FDKQVK 358
           ++K V+V  S   S + +RD E+R+  R+LH  Y D +CNPF+ PGD+I S + FD  V 
Sbjct: 77  KVKFVMVVDS---SNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSSRAFDNMVT 133

Query: 359 NIML 370
           ++M+
Sbjct: 134 SMMI 137


>AF089106-1|AAF00568.1|  140|Homo sapiens unknown protein.
          Length = 140

 Score =  101 bits (243), Expect = 1e-21
 Identities = 51/124 (41%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   LSRQWLVHTALDALEEXLTTANPNNSGTNTTTARTDLRDLYLGLLFSTDTHKIYGYVTNT 181
           L   ++VHT+LD ++E ++             A  D R+LYLGLL+ T+ +K+YGYVTN+
Sbjct: 26  LKFHYMVHTSLDVVDEKISAMGK---------ALVDQRELYLGLLYPTEDYKVYGYVTNS 76

Query: 182 RIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYADAICNPFHLPGDQITSPK-FDKQVK 358
           ++K V+V  S   S + +RD E+R+  R+LH  Y D +CNPF+ PGD+I S + FD  V 
Sbjct: 77  KVKFVMVVDS---SNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSSRAFDNMVT 133

Query: 359 NIML 370
           ++M+
Sbjct: 134 SMMI 137


>AK126779-1|BAC86686.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44827 fis, clone BRACE3046837. ).
          Length = 177

 Score = 96.3 bits (229), Expect = 5e-20
 Identities = 47/111 (42%), Positives = 71/111 (63%)
 Frame = +2

Query: 2   LSRQWLVHTALDALEEXLTTANPNNSGTNTTTARTDLRDLYLGLLFSTDTHKIYGYVTNT 181
           L   ++VHT+LD ++E ++             A  D R+LYLGLL+ T+ +K+YGYVTN+
Sbjct: 26  LKFHYMVHTSLDVVDEKISAMGK---------ALVDQRELYLGLLYPTEDYKVYGYVTNS 76

Query: 182 RIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYADAICNPFHLPGDQITS 334
           ++K V+V  S   S + +RD E+R+  R+LH  Y D +CNPF+ PGD+I S
Sbjct: 77  KVKFVMVVDS---SNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQS 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,243,551
Number of Sequences: 237096
Number of extensions: 1277714
Number of successful extensions: 6032
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6027
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)