Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_K10
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53181-6|AAA93486.1| 224|Caenorhabditis elegans Hypothetical pr... 35 0.036
U97552-2|AAB52862.1| 141|Caenorhabditis elegans Human sedl (spo... 29 2.4
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 27 7.3
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 7.3
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 7.3
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 27 7.3
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 27 7.3
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 27 7.3
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 7.3
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 27 7.3
>U53181-6|AAA93486.1| 224|Caenorhabditis elegans Hypothetical
protein F36D4.2 protein.
Length = 224
Score = 34.7 bits (76), Expect = 0.036
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 134 LFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYAD-AICNPFH 310
+ T K++ + T +K V++TS+ S ++ + L +++ LY D A+ NPF+
Sbjct: 141 VLETTQFKLFCLQSRTGVKFVVITSAASNIAAD-------SLLSKMYELYTDFALKNPFY 193
Query: 311 LPGDQITSPKFDKQVKNIM 367
I + KFD+ +K ++
Sbjct: 194 SIDMPIRAQKFDEAIKTLL 212
>U97552-2|AAB52862.1| 141|Caenorhabditis elegans Human sedl
(spondyloepiphysealdysplasia tarda) related protein 1
protein.
Length = 141
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = +2
Query: 119 LYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALYADAIC 298
+YL ++ + + +VT +RI+ +++ + + G ++ + ++ Y
Sbjct: 61 MYLKMVDKFNEWYVSAFVTASRIRFIMLHTHRADEG-------IKQFFQEMYETYIKHAM 113
Query: 299 NPFHLPGDQITSPKFDKQ 352
NPF+ D I SP F+++
Sbjct: 114 NPFYEIDDVIESPAFEQK 131
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 110 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 280
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 281 YADAICNPFHLPGDQITSPKFDKQVK 358
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 110 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 280
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 281 YADAICNPFHLPGDQITSPKFDKQVK 358
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 110 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 280
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 281 YADAICNPFHLPGDQITSPKFDKQVK 358
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 284 ADAICNPFHLPGDQITSPKFDKQ 352
AD CN FH G Q T+ +FD +
Sbjct: 1397 ADGTCNRFHYGGCQGTNNRFDNE 1419
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 284 ADAICNPFHLPGDQITSPKFDKQ 352
AD CN FH G Q T+ +FD +
Sbjct: 1468 ADGTCNRFHYGGCQGTNNRFDNE 1490
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 284 ADAICNPFHLPGDQITSPKFDKQ 352
AD CN FH G Q T+ +FD +
Sbjct: 1468 ADGTCNRFHYGGCQGTNNRFDNE 1490
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 110 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 280
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 281 YADAICNPFHLPGDQITSPKFDKQVK 358
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 110 LRDLYLGLL-FSTDTHKIYGYVTNTRIKLVLVTS--STSPSGSNIRDAEVRTALRRLHAL 280
+RDL G+L + Y T + + V V S STS G N + +V + LR +++
Sbjct: 1506 IRDLTAGMLPLGLGVSEAYSVGTLSTARSVSVRSGASTSSGGENRQSQDVESLLRHRYSV 1565
Query: 281 YADAICNPFHLPGDQITSPKFDKQVK 358
++ C+ I + FD QV+
Sbjct: 1566 HS---CDSEQSSEVWIVTADFDGQVE 1588
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 276 LCTLTPYAIHSIYPVIKLLHRNSTSK 353
L T+T IHSI +I+LL RN T K
Sbjct: 597 LLTITTLPIHSILNMIELLLRNPTWK 622
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,054,863
Number of Sequences: 27780
Number of extensions: 199230
Number of successful extensions: 485
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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