Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_K06
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.46 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.46 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.8  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -2

Query: 397 LSQTDVPSTPIKGRSISNNFALTLFF-KSKTSFSGVNLITIC*SVFFFRTQGSLMHSCNW 221
           LS   V  T I G +     +L ++F  ++ +FSGV   TI   V  FRT GS       
Sbjct: 28  LSPLKVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSPTIMKFVLSFRT-GSFTF-LMV 85

Query: 220 TALLNSGTDF 191
            A+L+SGT F
Sbjct: 86  VAVLSSGTTF 95


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -2

Query: 397 LSQTDVPSTPIKGRSISNNFALTLFF-KSKTSFSGVNLITIC*SVFFFRTQGSLMHSCNW 221
           LS   V  T I G +     +L ++F  ++ +FSGV   TI   V  FRT GS       
Sbjct: 28  LSPLKVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSPTIMKFVLSFRT-GSFTF-LMV 85

Query: 220 TALLNSGTDF 191
            A+L+SGT F
Sbjct: 86  VAVLSSGTTF 95


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 158 RLSHKRETMSRKISPR 205
           R+ HK+E M++  +PR
Sbjct: 140 RMKHKKEQMNKVSTPR 155


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 158 RLSHKRETMSRKISPR 205
           R+ HK+E M++  +PR
Sbjct: 131 RMKHKKEQMNKVSTPR 146


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 174 VRQCPGKSVPELSKAVQLHECIKLPCV 254
           VR+   + +P+L   + +  C+K  CV
Sbjct: 42  VRELGSQWIPDLGVPIGVLYCMKCECV 68


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 456 IYKDTFPILSIYPSIQAEVTWALKAEDKD 542
           IYK+T+ I+        E TW      KD
Sbjct: 73  IYKNTYLIILFADFAYLETTWICTLLKKD 101


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 456 IYKDTFPILSIYPSIQAEVTWALKAEDKD 542
           IYK+T+ I+        E TW      KD
Sbjct: 91  IYKNTYLIILFADFAYLETTWICTLLKKD 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,328
Number of Sequences: 336
Number of extensions: 3030
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)