Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_K02
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.42 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.42 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.1  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 120 YGYAAPELHAAPVSYSAPIAKVAVEEYDAHPQYSFAYDVQDG 245
           + +  P+ +     Y AP+ ++   +YD +  Y   Y +Q G
Sbjct: 238 FDFYTPKRNPKEADYPAPLYELIDRKYDENVDYQVRYWLQKG 279


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 271  TRPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTEN 396
            T+P+T       +PW T   +     T P  T+ +T   T N
Sbjct: 1037 TKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTN 1078


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 470 CGISNWGSNLGDWCS 426
           CG + W ++  +WCS
Sbjct: 476 CGFAGWVTDGNNWCS 490


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 354 RCIQRCV*CHRGQPRSRILEQHRR 283
           R + +C  CH+    + +L+QH R
Sbjct: 192 RVLHQCPVCHKKFTNALVLQQHIR 215


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 366 CGDRRCIQRCV*CH 325
           CGD  CI+R + C+
Sbjct: 124 CGDGNCIERGLFCN 137


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 VHSAPVAYSSPIAKY 542
           ++SAP+   +PI KY
Sbjct: 70  LNSAPIRMKNPIVKY 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,951
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)