Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_K02
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 33 0.20
06_03_0905 + 25843547-25844314 31 0.62
03_02_0213 + 6480521-6480644,6482347-6482499,6482582-6482980,648... 31 1.1
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 31 1.1
05_03_0458 + 14280953-14281866,14281964-14282912 30 1.4
05_07_0219 - 28474661-28475146,28475979-28476644 29 2.5
04_04_1125 + 31085106-31085714 29 2.5
03_06_0716 - 35695158-35696795,35697075-35697288,35697290-356973... 29 2.5
03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662... 29 2.5
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 29 3.3
02_01_0016 + 110796-110979,111252-111768,111847-112213 29 3.3
04_03_0904 + 20717005-20718087 29 4.4
09_02_0082 - 4060018-4061604 28 5.8
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 28 5.8
10_02_0195 + 6578384-6578629,6578710-6579300,6586302-6587512,658... 28 7.7
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421... 28 7.7
03_06_0348 - 33299824-33300234 28 7.7
03_02_0342 - 7645323-7645909,7646323-7646491 28 7.7
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 28 7.7
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 28 7.7
01_06_0323 - 28476459-28476915,28477075-28477525,28477623-284779... 28 7.7
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963... 28 7.7
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 280 ATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPT 408
AT LF+ P+ M+S +P TPP P T + + P PT
Sbjct: 148 ATGRLFRTPSQGSLAMSSPSPSPTPPSPLTPAPATTAPAPTPT 190
>06_03_0905 + 25843547-25844314
Length = 255
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 459 TYAASPVVHSAPIVHSAPVAYSSPIAKYPA-PFTYSAP 569
TY PV + P+V PV Y +P YP P TY P
Sbjct: 120 TYPTPPVT-TPPVVVGPPVTYPTPPVTYPTPPVTYPTP 156
>03_02_0213 +
6480521-6480644,6482347-6482499,6482582-6482980,
6483158-6483234,6483990-6485312
Length = 691
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 222 FAYDVQDGVTGDSKSQHETRDGDVVQGSYSVVDPDGI--KRTVEYTADPHNGF-NAVVH 389
+A DG G KSQ + RD D G DP K V ++ + H F NAV H
Sbjct: 163 YASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNH 221
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 265 VNTRPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTPL 414
V T PA A + P P + A+++P TP PT ST T +P PL
Sbjct: 87 VATEPAAAAT-EPPPPSIRTAAASSP-TTPTEPTAASTEHATASPAQPPL 134
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 340 PLNTPPIPTTVSTLSCTENPLPTPLK*HMLHQSPRLLPQLLMPHPRS 480
PL P P +TLSC+ +P P P S LP +P PRS
Sbjct: 70 PLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPP--VPTPRS 114
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +1
Query: 238 KMASLVTQRVNT--RPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTP 411
++A L R+ T R P P P+++ P PP P T S+ + T TP
Sbjct: 50 ELAQLEKTRMTTWARSVVESFDTAPPPSPPPLSATTPHPPPPSPATSSSRTATATATATP 109
Query: 412 LK*HMLHQSPRLLPQLLMPHPR 477
P LL P PR
Sbjct: 110 TS--PTPTPPPTSATLLWPRPR 129
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 304 PTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTP 411
PTPW TP P PP P T +T + P P P
Sbjct: 75 PTPW-TP----TPATPPPTPATPATPTTPPTPAPAP 105
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 277 PATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLP-TP 411
P A PTPW P A+ TPP PT + T P P TP
Sbjct: 51 PTPATPTTPPTPWTPPPATP----TPPTPTPWTPTPATPPPTPATP 92
>03_06_0716 -
35695158-35696795,35697075-35697288,35697290-35697372,
35697695-35697865
Length = 701
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 117 QYGYAAPELHAAPVSYSAPIAKVAVEEYDAH 209
+Y PELH P+ Y++P+AK + Y +
Sbjct: 275 EYWANHPELHKIPIYYASPLAKKCMAVYQTY 305
>03_05_0705 -
26965352-26965542,26965732-26965763,26966141-26966235,
26966737-26966810,26966894-26967029,26967137-26967200,
26967285-26967350,26967445-26967587,26969314-26969407,
26969779-26969902,26970016-26970193,26970273-26970395,
26970884-26970955,26971032-26971139,26972511-26972627,
26972757-26972889,26973209-26973299,26974642-26974722,
26975342-26975421,26975500-26975705,26977417-26977893
Length = 894
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 191 NSDFSNGGGVRHWCCVQFGCCV 126
N NGG + +W C+ F CV
Sbjct: 454 NKRMLNGGSINYWACLTFASCV 475
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 465 AASPVVHSAPIVHSAPVAYSSPIA 536
A SPVV APIV PVA SP++
Sbjct: 213 APSPVVIPAPIVDPPPVAVHSPVS 236
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 304 PTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTPLK*HMLHQSPRLLPQLLMPHPRS 480
P+P +P L PIPT + +P P PL + + PR LP + P P S
Sbjct: 153 PSPLTSPSPPALALAPSPIPTPIIAPPPVSSPAP-PLP-PLWRRRPRRLPPIWRPTPPS 209
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +1
Query: 301 DPTPWLTPMASNAPLNTPPIPT-TVSTLSCTENPLPTPLK*HMLHQSPRLLPQLLMPHPR 477
+P P P P TPP PT T T + T P P P +P+ P P P
Sbjct: 58 EPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPP-------YTPKPTPPAHTPTPP 110
Query: 478 SY 483
+Y
Sbjct: 111 TY 112
>09_02_0082 - 4060018-4061604
Length = 528
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 316 LTPMASNAPLNTPPIPTT-VSTLSCTENPLPTPL 414
LTP A P+ TPP P T V T T P PL
Sbjct: 335 LTPPAPAPPVATPPTPATPVPTPPMTAPPADVPL 368
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 471 SPVVHSAPIVHSAPVAYSSPIAKYPA 548
S SAP V+SAPVA ++P A PA
Sbjct: 428 SAATESAPAVNSAPVAEAAPEAAPPA 453
>10_02_0195 +
6578384-6578629,6578710-6579300,6586302-6587512,
6587593-6587844,6587932-6588042,6588133-6588214,
6588299-6588382,6588464-6588658
Length = 923
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 322 PMASNAPLNTPPIPTTVSTLSCTENPLPTPLK*HMLHQSPRLLPQLLMPHPRSY 483
P + P+ T P + + +S P P P + + SP LP+ P P+SY
Sbjct: 457 PAPPSPPICTTPPGSPLPQISPVRGPSPPPQQ--VAPNSPTTLPRQPSPAPQSY 508
>06_01_0587 -
4211917-4212021,4212250-4212478,4213426-4213759,
4215116-4215186,4215374-4215493,4216353-4216771,
4216885-4217336,4217434-4217812
Length = 702
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 320 PRWHQTHR*IHRRSPQRFQRCRAQRTPCPRR 412
P H T++ + RSP +F R+ P PRR
Sbjct: 485 PETHLTNQILRPRSPYKFSGSRSLLVPSPRR 515
>03_06_0348 - 33299824-33300234
Length = 136
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 413 SGVGKGFSVHDSVETVVGIGGVFN-GAFDAIGVNHGVGSLNN 291
+ G G V D VG+GG+ + F A+G +G G NN
Sbjct: 45 AAAGTGAGVEDKKNLFVGVGGMGDLPGFPAVGGGYGGGFGNN 86
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 295 FKDPTPWLTPMASNAPLNTPPIP 363
+K PTP LTP+ + P PP P
Sbjct: 186 YKPPTPTLTPIPTPEPSYGPPAP 208
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 316 LTPMASNAPLNTPPIPTTVSTLSCTE 393
+TP+ L+T P+PT STLS E
Sbjct: 732 VTPVTPTTILSTEPVPTVASTLSKDE 757
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 219 SFAYDVQDGVTGDSKSQ--HETRDGDVVQGSYSVVDPDGIKRTVEYTADPHNGFNA 380
S +D Q+ G S + D DV G +++DP K T E T + H GF++
Sbjct: 558 STIWDSQNDKAGPDSSAVVFDQYDSDV--GEENLLDPFSSKHTEEPTVEDHKGFSS 611
>01_06_0323 -
28476459-28476915,28477075-28477525,28477623-28477904,
28478089-28478118,28480560-28481433
Length = 697
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 346 NTPPIPTTVSTLSCTENPLPTPLK*HMLHQSP 441
N PP P ++ L+C EN P + +L SP
Sbjct: 160 NAPPKPPSIHPLTCGENSEDAPTQSFLLPASP 191
>01_01_1197 -
9630506-9630681,9630774-9630805,9630894-9630988,
9631569-9631642,9631732-9631843,9631967-9632030,
9632210-9632275,9632396-9632526,9632884-9633021,
9633115-9633227,9633306-9633471,9633588-9633701,
9633791-9633853,9633953-9634060,9634143-9634259,
9634343-9634505,9634646-9634743,9634852-9634949,
9635054-9635190,9635309-9635530,9635625-9635830,
9636758-9636845,9638085-9638668
Length = 1054
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 262 RVNTRPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTPLK*HMLHQSP 441
++ T P+ ++ K PT L S+ IP+ + +S E PL + + + QSP
Sbjct: 768 QIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLVSKYRASVRSQSP 827
Query: 442 RL 447
+L
Sbjct: 828 KL 829
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,629,820
Number of Sequences: 37544
Number of extensions: 394761
Number of successful extensions: 1435
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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