Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_K02
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 30 1.7
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 29 2.2
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 29 2.2
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 29 2.2
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 29 2.2
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 28 6.8
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 28 6.8
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 28 6.8
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 28 6.8
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 9.1
AF016654-3|AAB66030.1| 348|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 250 LVTQRVNTRPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCT 390
L+T+ P T + P P TP S AP +T P P +T++ T
Sbjct: 122 LITETTTQPPTTTTTLETPAPESTP--SMAPSHTDPTPAPETTVAPT 166
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 274 RPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTPL 414
+P++A + P P P + P PP+ V T S + +PLP+P+
Sbjct: 493 QPSSAPVHTPPAPPAIPSPAKLPTAPPPVEKPV-TPSPSASPLPSPV 538
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 304 PTPWLTPMASNAPLNTPPIPTTVSTLSCTENP-LPTPL 414
P+ T S+A L+TPP PTT + S + P P+PL
Sbjct: 268 PSASTTSFTSSARLSTPPRPTTTAAQSLSLAPQTPSPL 305
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 295 FKDP--TPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPT 408
F+DP P + P SN +N P + T + SC E P PT
Sbjct: 224 FEDPIVAPSVLPATSNVLINVP-VDTCPVSPSCQEEPTPT 262
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 295 FKDP--TPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPT 408
F+DP P + P SN +N P + T + SC E P PT
Sbjct: 224 FEDPIVAPSVLPATSNVLINVP-VDTCPVSPSCQEEPTPT 262
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 295 FKDP--TPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPT 408
F+DP P + P SN +N P + T + SC E P PT
Sbjct: 224 FEDPIVAPSVLPATSNVLINVP-VDTCPVSPSCQEEPTPT 262
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 295 FKDP--TPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPT 408
F+DP P + P SN +N P + T + SC E P PT
Sbjct: 224 FEDPIVAPSVLPATSNVLINVP-VDTCPVSPSCQEEPTPT 262
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 289 MLFKDPTPWLTPMASNAPLNTP-PIPTTVSTLSCTENPLPTPLK*HMLHQSPRLLPQLLM 465
MLF P P+ PM + P + P P P P P ML P +P+ M
Sbjct: 81 MLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPIPK-PM 139
Query: 466 PHPR 477
P P+
Sbjct: 140 PFPK 143
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1
Query: 289 MLFKDPTPWLTPMASNAPLNTP-PIPTTVSTLSCTENPLPTPLK*HMLHQSPRLLPQ-LL 462
MLF P P+ PM + P + P P P P P P+ H P+ P+ +L
Sbjct: 145 MLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKH----KPKPFPKPML 200
Query: 463 MPHP 474
P P
Sbjct: 201 FPKP 204
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 276 TRDGDVVQGSYSVVDPDGIKRTVEY 350
TR GD V G ++ DP ++R VE+
Sbjct: 215 TRRGDFVWGDFAASDPTFVRRAVEF 239
>Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical
protein T03D8.4 protein.
Length = 440
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 331 SNAPLNTPP-----IPTTVSTLSCTENPLPTPLK*HMLHQSPRLLPQLL 462
S +P+N P +P V++ T NP P++ H+L P PQ++
Sbjct: 259 SASPVNQPSHASNTVPVAVASYLVTANPSSQPIQLHILPPIPSPQPQII 307
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 256 SPVTPSCTSYAKLY*GCASYSSTATLA 176
SP +P C S + GC+S+S+ A++A
Sbjct: 1356 SPTSPRCRSRSPASSGCSSFSTIASIA 1382
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 256 SPVTPSCTSYAKLY*GCASYSSTATLA 176
SP +P C S + GC+S+S+ A++A
Sbjct: 1356 SPTSPRCRSRSPASSGCSSFSTIASIA 1382
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 256 SPVTPSCTSYAKLY*GCASYSSTATLA 176
SP +P C S + GC+S+S+ A++A
Sbjct: 1233 SPTSPRCRSRSPASSGCSSFSTIASIA 1259
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 256 SPVTPSCTSYAKLY*GCASYSSTATLA 176
SP +P C S + GC+S+S+ A++A
Sbjct: 1356 SPTSPRCRSRSPASSGCSSFSTIASIA 1382
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 256 SPVTPSCTSYAKLY*GCASYSSTATLA 176
SP +P C S + GC+S+S+ A++A
Sbjct: 1356 SPTSPRCRSRSPASSGCSSFSTIASIA 1382
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 304 PTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTP 411
PTP +A P TP +P ++ PLPTP
Sbjct: 1349 PTPTPATVAVPVPAQTPKVPQLPIGAPGSQVPLPTP 1384
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 468 ASPVVHSAPIVHSAP---VAYSSPIAKYPAPFTYSAPIY 575
A+PV+ +AP V +AP +A +P+ PAP +AP +
Sbjct: 52 AAPVLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAAPAF 90
>AF016654-3|AAB66030.1| 348|Caenorhabditis elegans Hypothetical
protein C17A2.4 protein.
Length = 348
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 279 RDGDVVQGSYSVVDPDGIKRTVEYTAD 359
R GD V + DPD I+ +V+Y A+
Sbjct: 174 RRGDFVDVGFQAADPDFIRNSVKYIAE 200
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 265 VNTRPATAMLFKDPTPWLTPMASNAPLNTPPIPTTVSTLSCTENPLPTPLK 417
V T P T ++ P P P+ +P P IP L + P P P K
Sbjct: 113 VETNPGTPRIYLPPPPRPPPVPPLSPPERPDIP-HARVLPQRQKPTPKPDK 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,093,626
Number of Sequences: 27780
Number of extensions: 300664
Number of successful extensions: 1123
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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