Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_K02
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    31   0.007
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.0  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = +3

Query: 129 AAPELHAAPVSYSAPIAKVAVE-EYDAHPQYSFAYDVQDGVTGDSKSQHETRDGD---VV 296
           AAP+  +      A I    +E  +D +  Y   ++  +G++     Q +  D +   V 
Sbjct: 14  AAPQRPSGGADKDAVITSQQLEVNFDGN--YINNFETSNGISHQESGQPKQVDNETPVVS 71

Query: 297 QGSYSVVDPDGIKRTVEYTADPHNGF 374
           QGS S   PDG + ++ Y AD  NGF
Sbjct: 72  QGSDSYTAPDGQQVSITYVAD-ENGF 96


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 464 ISNWGSNLGDWCSICYFSGVGKGFSVHDSVETVVGIGGVFNGAFDAIGV 318
           ++NW S   D   +    G  +G  +     T+ GIG V+NG  D IG+
Sbjct: 345 VTNWVSGNHDNHRVASRFGRQRGDEIVMLTLTLPGIGVVYNG--DEIGM 391


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 349 TPPIPTTVSTLSCTENPLPTPL 414
           TP       TL+C  NP P PL
Sbjct: 207 TPNYTACPPTLACPLNPNPQPL 228


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 425  ICYFSGVGKGFSVHDSVETVVGIGG 351
            IC   G G G    D V    G+GG
Sbjct: 1605 ICVLRGKGHGSDKDDVVYQQTGVGG 1629


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 121 TVTQHPNCTQHQCRTPPP 174
           T T  PN TQ+   T PP
Sbjct: 673 TTTTTPNTTQNASATTPP 690


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 239 RWRHW*LKESTRDPRRRC--CSRIL 307
           +W++W LK +T +P      CS IL
Sbjct: 264 KWKNWDLKYNTWEPISNLINCSDIL 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,533
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)