Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J17
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 68 1e-12
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 28 1.2
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 28 1.6
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 27 2.2
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 2.9
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 26 5.0
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 26 6.6
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 25 8.7
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 25 8.7
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 68.1 bits (159), Expect = 1e-12
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Frame = +3
Query: 186 RACIIGAGYSGLGAARYM--KQYHVNFTVFEATRNFGGTWHF-------------DPHVG 320
+ IIGAG SGL A+ + ++ T+FE + GG W++ +P +
Sbjct: 8 KIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILT 67
Query: 321 TDE----DGLPVFSS-MYNDLRTNTPRQTMEYYDFPFPEGTPSYPSATCFLDYLKSFVKH 485
T+ LPV+ S +Y DL+TNTP + M Y D F T +P +Y + + +
Sbjct: 68 TEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQ- 126
Query: 486 FDLLSHIQLRSLVTSVKWAGNHWNLTYTKTDTKENVT-ETCDFIVVANGPYNTPVWPKYD 662
LL I+L + V ++ W +TY T ++ + D + + NG Y P P
Sbjct: 127 -PLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIK 185
Query: 663 GIXTF----EGNMIHSHDYKDRKAYKNRKVLI 746
G+ + G+++HS +++ + + VL+
Sbjct: 186 GLDEYAKAVPGSVLHSSLFREPELFVGESVLV 217
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 374 EYATSNHGILRLSISRGNPVVSIGNVLPRLLKIICEAFRFTQSYSIAQLGHISEVGGQSL 553
E + + LRLS S ++ N + +I R T +Y I +GH + +
Sbjct: 227 EQMPTGNRFLRLSWSPDGAHIASVNAVNEGAYVIAIVQRDTWTYDINLVGHQGPLECATF 286
Query: 554 EPYLHKDGHQ 583
PYL++D Q
Sbjct: 287 NPYLYEDPFQ 296
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 195 IIGAGYSGLGAARYMKQYHVNFTVFEATRNFGGT 296
+IG G GL +AR ++ + EA+ GGT
Sbjct: 12 VIGGGSGGLASARRAAKHGAKVALIEASGRLGGT 45
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 513 RSLVTSVKWAGNHWNLTYTKTDTKENVTETCDFIVVANGPYNTPVWPKYDGIXTF 677
R LV + N W+ ++ + +EN + + +A G +T V P+Y I TF
Sbjct: 303 RHLVEFYESIKNFWSQSFLLSP-EENSLDDVLLVSIAGGGLDTHVVPEYSSISTF 356
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 447 TCFLDYLKSFVKHFDLLSHIQLRSLVTSVKWAGNHWNLTYTKTDTKEN 590
T D + FV+H+ +L +L+ KW N N T +T ++N
Sbjct: 606 TIIADEVVKFVEHYSSTFDQELLNLINDEKWQ-NFVNKTLVETRNRDN 652
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 162 NGLTLKTSRACIIGAGYSGLGAARYMKQYHVNFTVFEATRNFGG 293
N T ++A +IG G +GL A + N + + FGG
Sbjct: 32 NMSTANNTQAIVIGGGLAGLSATNTILDLGGNVLLLDKNTAFGG 75
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 192 CIIGAGYSGLGAARYMKQ 245
CI+GAG +GL AA +KQ
Sbjct: 94 CIVGAGPAGLSAAIRIKQ 111
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 638 IIRAICYHNEVARLSYIFLGVRLCVSKVPVIARPL 534
I+ +CY + L+YIF V + + + +A P+
Sbjct: 407 IVVYVCYSESIKALAYIFPKVTIVTAFLESVAEPV 441
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 178 KLRERASSALDIQVWVQPAI*NSITSTSQFSK 273
+L E + L Q W+QP I +I T+ F K
Sbjct: 166 ELIELTNKDLGFQEWIQPMIQGNIAITNSFLK 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,277,798
Number of Sequences: 5004
Number of extensions: 71920
Number of successful extensions: 195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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