Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J16
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022716-1|CAA18770.1| 371|Caenorhabditis elegans Hypothetical ... 155 2e-38
AL022716-2|CAA18772.1| 373|Caenorhabditis elegans Hypothetical ... 151 3e-37
U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeas... 40 0.002
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 38 0.006
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 38 0.006
Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 3.4
U23450-6|AAK31469.1| 790|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92834-11|CAB07388.2| 594|Caenorhabditis elegans Hypothetical p... 28 4.5
U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical pr... 28 4.5
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF000191-4|AAB52881.2| 362|Caenorhabditis elegans Hypothetical ... 28 4.5
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 5.9
U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF067945-13|AAC17676.2| 308|Caenorhabditis elegans Serpentine r... 27 7.8
AF039053-17|AAC25882.2| 279|Caenorhabditis elegans Serpentine r... 27 7.8
>AL022716-1|CAA18770.1| 371|Caenorhabditis elegans Hypothetical
protein C24F3.1a protein.
Length = 371
Score = 155 bits (376), Expect = 2e-38
Identities = 81/186 (43%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Frame = +3
Query: 9 PPIFSHXFVIQNHADIVSCVVMVFLVGLMVQSTSPIASLFISLHHNVSGVEPTREAPKGE 188
PPI SH F+IQNH DI+SCVVMVF+VGLM T ++SLFI+ +N + + + E
Sbjct: 16 PPILSHEFIIQNHGDIMSCVVMVFIVGLMFPLTHSLSSLFIAPQYNGTYTVAVEQGQERE 75
Query: 189 PFTYESGWKDACAVFFYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQLIVFH 368
Y SG D A+FFYS+ IV+HA++QEY LDKISKK HLSK ES + F
Sbjct: 76 VHGYLSGILDLPAIFFYSVCWIVVHAVVQEYGLDKISKKTHLSKVSTFKFGESFHQMFFT 135
Query: 369 LVTLVWGGDAILREGFIFN-ISQLWEGYPV--HPMSFLLKLWWVVQASYWLHTIPELYFQ 539
+ ++ + F+ + +W GYP MS KL+++ Q SYW+H PE Y Q
Sbjct: 136 VYSIAHAFYIVSERLEDFSEVKSVWLGYPTEHRVMSAAYKLYFIFQISYWIHQFPEFYLQ 195
Query: 540 RIKKDE 557
++K+DE
Sbjct: 196 KLKRDE 201
>AL022716-2|CAA18772.1| 373|Caenorhabditis elegans Hypothetical
protein C24F3.1b protein.
Length = 373
Score = 151 bits (367), Expect = 3e-37
Identities = 81/188 (43%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
Frame = +3
Query: 9 PPIFSHXFVIQNHADIVSCVVMVFLVGLMVQSTSPIASLFISLHHNVSGVEPTREAPKGE 188
PPI SH F+IQNH DI+SCVVMVF+VGLM T ++SLFI+ +N + + + E
Sbjct: 16 PPILSHEFIIQNHGDIMSCVVMVFIVGLMFPLTHSLSSLFIAPQYNGTYTVAVEQGQERE 75
Query: 189 PFTYESGWKDACAVFFYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQLIVFH 368
Y SG D A+FFYS+ IV+HA++QEY LDKISKK HLSK ES + F
Sbjct: 76 VHGYLSGILDLPAIFFYSVCWIVVHAVVQEYGLDKISKKTHLSKVSTFKFGESFHQMFFT 135
Query: 369 LVTLVWGGDAI---LREGFIFNISQLWEGYPV--HPMSFLLKLWWVVQASYWLHTIPELY 533
+ ++ + L + +W GYP MS KL+++ Q SYW+H PE Y
Sbjct: 136 VYSIAHAFYIVSERLEDFSEVKSFSVWLGYPTEHRVMSAAYKLYFIFQISYWIHQFPEFY 195
Query: 534 FQRIKKDE 557
Q++K+DE
Sbjct: 196 LQKLKRDE 203
>U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 2 protein.
Length = 329
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/81 (17%), Positives = 42/81 (51%)
Frame = +3
Query: 318 KSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVVQ 497
+ + S + E +++ ++ V G +L E +++I++ W +P HP+ + ++ +Q
Sbjct: 82 EKKYSRMAECAMRALYYTISFVCGLYLVLHESHLYDITECWRNWPFHPIPNAVAWYYWIQ 141
Query: 498 ASYWLHTIPELYFQRIKKDEW 560
+++ + + F K+ ++
Sbjct: 142 GGFYIALVFGILFLDAKRSDF 162
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/93 (18%), Positives = 41/93 (44%)
Frame = +3
Query: 315 SKSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVV 494
S SR + E ++ ++G + +++++ Q W GYP HP+ + ++++
Sbjct: 85 SVSRAKKILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVPDTIWWYYMI 144
Query: 495 QASYWLHTIPELYFQRIKKDEWAGRIRNAATAF 593
+ ++ + F + D W + + T F
Sbjct: 145 ETGFYYSLLIGSTFDVRRSDFWQLMVHHVITIF 177
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/93 (18%), Positives = 41/93 (44%)
Frame = +3
Query: 315 SKSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVV 494
S SR + E ++ ++G + +++++ Q W GYP HP+ + ++++
Sbjct: 85 SVSRAKKILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVPDTIWWYYMI 144
Query: 495 QASYWLHTIPELYFQRIKKDEWAGRIRNAATAF 593
+ ++ + F + D W + + T F
Sbjct: 145 ETGFYYSLLIGSTFDVRRSDFWQLMVHHVITIF 177
>Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical
protein F22B5.4 protein.
Length = 164
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 420 FNISQLWEGYPVHPMSFLLKLWWVV--QASYWLHTIPELYFQR 542
F + +L Y V+P+ L W+V+ ASYW E++ R
Sbjct: 68 FLVRRLGHAYEVYPLFVLTAAWFVLFCSASYWSFGKAEIWLDR 110
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 120 SLFISLHHNVSGVEPTREAPKGEPFTYES 206
S FI LHH + ++ + + P PFT++S
Sbjct: 183 SPFIVLHHGGTAIQTSSQPPAFSPFTFQS 211
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 443 FPKLRDVENETFPEYSITTPYQSYKMENYKLSRFIE 336
FP+L D+E+ F E SI YQ+ + L+ F E
Sbjct: 1693 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1728
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 443 FPKLRDVENETFPEYSITTPYQSYKMENYKLSRFIE 336
FP+L D+E+ F E SI YQ+ + L+ F E
Sbjct: 1690 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1725
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 443 FPKLRDVENETFPEYSITTPYQSYKMENYKLSRFIE 336
FP+L D+E+ F E SI YQ+ + L+ F E
Sbjct: 1693 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1728
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 443 FPKLRDVENETFPEYSITTPYQSYKMENYKLSRFIE 336
FP+L D+E+ F E SI YQ+ + L+ F E
Sbjct: 1690 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1725
>U23450-6|AAK31469.1| 790|Caenorhabditis elegans Hypothetical
protein C30B5.5 protein.
Length = 790
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 249 CIVMHAILQEYFLDKISKKFHLSKSR-LSALNESGQL 356
C+V+ IL YFL K S+K H K + L ES L
Sbjct: 738 CVVIAWILSCYFLKKHSQKLHQKKQKALEGFYESNNL 774
>Z92834-11|CAB07388.2| 594|Caenorhabditis elegans Hypothetical
protein F39B2.8 protein.
Length = 594
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Frame = +3
Query: 234 FYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQLIVFHLVTLV------WGGD 395
FY + + ++ LQEY ++ K H+S L ++ + L+ WG
Sbjct: 288 FYGSIVLKIYRNLQEY---RVRKAQHVSVREQDMLKYLAAMLALTITGLMAWTVGSWGDT 344
Query: 396 AILREGFIFNISQ----LWEGYPVHPMSFLLKLWWVVQASYWL 512
A+ R + + Q +W GY + + + ++L + + S WL
Sbjct: 345 ALWRTAWPQCLMQGWHVIWHGYELLFLLYAVRLCYKARNSDWL 387
>U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical
protein F49E8.7b protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 1 TKTLPSSVMXL*FKIMQILFHVLLWFSWLD*WYSLQVPLQACSSVYTTMSVEWNQRE 171
++ L VM + + I LF ++L SW +L++ +ACSS+ +EW+ +
Sbjct: 92 SEELVERVMPVSYFIPFELFRMML-LSWQPKVLNLRLRTEACSSIEDAARIEWDDED 147
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 1 TKTLPSSVMXL*FKIMQILFHVLLWFSWLD*WYSLQVPLQACSSVYTTMSVEWNQRE 171
++ L VM + + I LF ++L SW +L++ +ACSS+ +EW+ +
Sbjct: 270 SEELVERVMPVSYFIPFELFRMML-LSWQPKVLNLRLRTEACSSIEDAARIEWDDED 325
>AF000191-4|AAB52881.2| 362|Caenorhabditis elegans Hypothetical
protein T23C6.5 protein.
Length = 362
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 228 VFFYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQL 356
+FF + V ++A L F I + FHL K R S + +S ++
Sbjct: 301 LFFNAAVDPFLYAFLSTRFRQSIKETFHLGKVRESNIEQSSRV 343
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 83 GWIDGTVYKSHCKLVH--QFTPQCQWSGTNERSAERRTFYL--*IWVERCLCRVFLFTCL 250
GW G + +HC++V Q QC+W ++ +RT + ++V + LC + F +
Sbjct: 34 GWQTGVL--NHCRVVTMAQSNLQCEWDCPCVGASSKRTSAIIEGLFVIQVLCLIAAFFLV 91
Query: 251 YCDACYSSGI 280
+ A GI
Sbjct: 92 FASAAMIYGI 101
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 406 GKVSFSTSLSFGKATQYTQ*ASFSSYGG---LSKLPIGCTQSP 525
G S TSL FG + FSS G SK+P+G +SP
Sbjct: 1710 GSQSSLTSLDFGTVPDFGSPLQFSSKAGGFQRSKIPLGSFRSP 1752
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 406 GKVSFSTSLSFGKATQYTQ*ASFSSYGG---LSKLPIGCTQSP 525
G S TSL FG + FSS G SK+P+G +SP
Sbjct: 1710 GSQSSLTSLDFGTVPDFGSPLQFSSKAGGFQRSKIPLGSFRSP 1752
>U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical
protein C17G10.1 protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 212 PPRFISKRFAFRRFSRWFHSTDIVV*TDEQACNGTC 105
P F ++F ++ W + V T++ CNG+C
Sbjct: 110 PAVFSFRQFLYKEVKEWLQNVSGVELTEQVDCNGSC 145
>AF067945-13|AAC17676.2| 308|Caenorhabditis elegans Serpentine
receptor, class x protein59 protein.
Length = 308
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 189 PFTYESGWKDACAVFFYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQLIVFH 368
P GW +F +VCIV+ I + + I+KK H S + + S + I F
Sbjct: 162 PLCNTIGWYADFCKYFTIIVCIVLIDIATLWKVRSINKKVHTSVNSQTHRKMSAREINFL 221
Query: 369 LVTLVWG 389
T+ G
Sbjct: 222 KQTIFQG 228
>AF039053-17|AAC25882.2| 279|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 16 protein.
Length = 279
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Frame = +3
Query: 216 DACAVFFYSL------VCIVMHAILQE---YFLDKIS-KKFHLSKSRLSALNESGQLIVF 365
+AC +YS+ + VM AIL +FL+K S ++ LSK+ L AL ++ +I+F
Sbjct: 163 NACFNKYYSINKGTAYILTVMFAILLSTKLFFLNKDSTEQKTLSKANLLALIDAANVIIF 222
Query: 366 HLVTLVW 386
H +++
Sbjct: 223 HFSPILF 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,960,812
Number of Sequences: 27780
Number of extensions: 365936
Number of successful extensions: 971
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -