Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J14
(594 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 224 7e-60
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 127 1e-30
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 123 2e-29
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 101 8e-23
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 90 2e-19
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 89 6e-19
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 87 2e-18
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 29 0.39
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 29 0.68
SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces... 27 2.7
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 26 3.6
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 26 4.8
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 26 4.8
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 25 6.3
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 25 8.3
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 25 8.3
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 224 bits (548), Expect = 7e-60
Identities = 116/189 (61%), Positives = 139/189 (73%), Gaps = 1/189 (0%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A AV AG SVGIKA++GVVLA K L S+ KV T IGMVYSGMGPD+R
Sbjct: 24 ALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFR 83
Query: 184 LLVTQARKMAQQ-YFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR 360
+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE TQSGGVRPFGVSLL+ G +E
Sbjct: 84 VLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKG 143
Query: 361 PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQM 540
P L+Q DPSG YFAWKATA+GK+ KTFLEKRY ++LELDDAVHTAIL LKE FEG++
Sbjct: 144 PSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEGEL 203
Query: 541 TADNIXVGI 567
T DNI + +
Sbjct: 204 TEDNIEIAV 212
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 127 bits (307), Expect = 1e-30
Identities = 67/189 (35%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLV 192
AV G ++ ++ + +V+ K+ L + K+ H+ + ++G+ D R+L+
Sbjct: 26 AVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILI 85
Query: 193 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEG--RPY 366
+AR AQ + L +P+ L + VA V Q+YTQSGGVRPFGVS LI G++ G P
Sbjct: 86 DKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPR 145
Query: 367 LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTA 546
++Q +P+G Y AWKATA+G+ + +LEK + E L D+ +H A+ +L E Q +
Sbjct: 146 VYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLEVV--QTAS 203
Query: 547 DNIXVGICD 573
NI + I D
Sbjct: 204 GNIELAIMD 212
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 123 bits (297), Expect = 2e-29
Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHK-HKRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
A A+ G ++GI A +G+VLA K ++L S K+ ++ +G+ D
Sbjct: 24 ALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADA 83
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR 360
+L+ AR++ QQY ++E +P QLV+RV + Q YTQ GG+RPFGVS L GW+ R
Sbjct: 84 NILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIR 143
Query: 361 PY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKE 522
Y LFQ +PSG Y +W+A ++G N + ++ + + Y +D+ LD+A A+ L +
Sbjct: 144 GYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSK 198
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 101 bits (242), Expect = 8e-23
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A A+ G ++G+K + VVL + L +HSV K+ HIG SG+ D R
Sbjct: 27 AIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADAR 86
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGG------VRPFGVSLLICG 345
++ AR Q + Y EP Q + + + + RPFGV+LLI G
Sbjct: 87 TIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAG 146
Query: 346 WEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEG 525
+E P L+ +PSG YF ++A A+G K+ L K + +D+ L++A + L++
Sbjct: 147 IDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQV 206
Query: 526 FEGQMTADNIXVGICDASG 582
E ++ + N+ + A G
Sbjct: 207 MEEKLDSKNVQLAKVTAEG 225
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 90.2 bits (214), Expect = 2e-19
Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A A+ G +VG+ + VL ++ L + K+ HIG+ +G+ PD R
Sbjct: 25 ALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQK--KLIRIDDHIGIAIAGLAPDAR 82
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRP 363
+L ++ A ++ PIP +L+ +VA Q TQ G RP+GV L+ G++E P
Sbjct: 83 VLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESGP 142
Query: 364 YLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDLELDDAVHTAILTLKEGF--E 531
+L + PSG + T+MG + +T++E+ D ++ + +A+ L++ +
Sbjct: 143 HLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKD 202
Query: 532 GQMTADNIXVGI 567
++T +N+ + +
Sbjct: 203 QELTEENVSISV 214
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 88.6 bits (210), Expect = 6e-19
Identities = 51/167 (30%), Positives = 79/167 (47%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A+ AV +GIK +GV+LA L N++ HIG+ +G PD +
Sbjct: 26 AYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQ 85
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRP 363
+V +AR A + Y PIP + R+ +Q +T VRPFGV + ++ P
Sbjct: 86 HIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEGP 145
Query: 364 YLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTA 504
+L+ +P+G Y+ + A GK + LEK L++ DAV A
Sbjct: 146 HLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEA 192
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 87.0 bits (206), Expect = 2e-18
Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Frame = +1
Query: 22 AGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLVTQA 201
AG SVG+ N + K L A +V V T IG V +G D R V++A
Sbjct: 33 AGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRA 92
Query: 202 RKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSL-LICGWEEGRPYLFQC 378
R A ++ P+P L +R+A + Q TQ +RP GV++ L+ +E P LF+
Sbjct: 93 RSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKL 152
Query: 379 DPSGAYFAWKATAMGKNFNNGKTFLEKRYTED---LELDDAVHTAILTLKEGFEGQMTAD 549
DP+G Y +KAT+ G +LEKR+ +D L D V T I L +
Sbjct: 153 DPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSLSTDFKST 212
Query: 550 NIXVGIC-DASGFRRL 594
+ +G+ D FR L
Sbjct: 213 ELQIGVVEDDKPFRVL 228
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 29.5 bits (63), Expect = 0.39
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 91 RILYAAHSVNKVEXXTG----HIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQ 258
R Y+ H+VNK++ T V D+ L T RK+ Y+ +Y P +
Sbjct: 1586 RYTYSQHTVNKIQIITNITLDFDSFVLRTTVNDFLFLQTILRKIYNFYYALYDVPTTDVE 1645
Query: 259 LVQR 270
L++R
Sbjct: 1646 LLKR 1649
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 28.7 bits (61), Expect = 0.68
Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 1/188 (0%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVL-APAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLL 189
A + G VG+ A + +VL A + A + K+ + +I +G D +
Sbjct: 31 ATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFV 90
Query: 190 VTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPYL 369
+ + + L Y P ++V + + Q + G G L++ G++ P+L
Sbjct: 91 TSMISSNIELHSL-YTNRKP--RVVTALTMLKQHLFRYQG--HIGAYLVLGGYDCKGPHL 145
Query: 370 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTAD 549
F G+ A+G + LE +Y DLE H A+ +KE E + D
Sbjct: 146 FTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLER----HEAMELVKEAIEAGIFND 201
Query: 550 NIXVGICD 573
CD
Sbjct: 202 LGSGSNCD 209
>SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 361 PYLFQCDPSGAYFAWKATAMG---KNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFE 531
P++ QCD + W T MG N N T Y + D+A TA+ + F+
Sbjct: 227 PFITQCDTATGDNYWAGTYMGDFVSNITNVLTNSTGHYCTTQQEDNASLTAL--TRASFD 284
Query: 532 GQMTADNIXV 561
G + + + +
Sbjct: 285 GLVNINRVVI 294
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 157 KPCQCGQLXXRLC*HCVQ 104
KPCQCG R C H ++
Sbjct: 33 KPCQCGYRVCRFCWHHIK 50
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 211 PSSLLESPVNDSLDPFPSKPCQCGQ 137
PS+ E ND +DP P +P G+
Sbjct: 491 PSASREKKTNDLIDPLPFQPMDWGK 515
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 34 SVGIKASNGVVLAPAHKHKRIL-YAAHSVNKVEXXTGHIGMVYSGMGPDYRLLV 192
S G+K G+++ A + AA VN TGH V +G+G +LV
Sbjct: 246 SSGVKRGEGLMVVTATGDSTFVGRAASLVNAAAGGTGHFTEVLNGIGTILLVLV 299
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 584 NPLASQMPTXMLSAVI*PSKPSLRVRIAV*TASSNSKSSVY 462
N L S + T +S V PSK +++I+ T S S S+Y
Sbjct: 276 NQLLSHLVTSSISIVSKPSKKGSKLKISNITLRSGSVVSLY 316
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 106 AHSVNKVEXXTGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVM 285
A ++N+ E IG G+GP Y T+A + + +YH A+ + VA +
Sbjct: 126 ADALNEAELGKQSIGTTGKGIGPAYS---TKATRSGIRVHHLYHWAEFEARYRKNVADLQ 182
Query: 286 QEY 294
+ Y
Sbjct: 183 KRY 185
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 381 PLRSLFCMESHSYG 422
PL +LFC+ES YG
Sbjct: 552 PLHTLFCIESDRYG 565
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,539,762
Number of Sequences: 5004
Number of extensions: 54636
Number of successful extensions: 154
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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