Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J14
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 244 4e-65
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 244 4e-65
06_01_0539 + 3869156-3869908 128 2e-30
06_01_0529 + 3831100-3831852 128 2e-30
06_01_0479 + 3419657-3420337 128 3e-30
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 124 5e-29
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 123 9e-29
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 98 5e-21
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 93 2e-19
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 84 7e-17
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 81 9e-16
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 76 2e-14
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 70 2e-12
04_01_0631 + 8381361-8381560,8381918-8382020,8382604-8383497 32 0.40
05_05_0100 + 22388457-22388561,22388657-22388808,22388897-223892... 30 1.6
05_05_0099 - 22381586-22382604,22382683-22383056,22383145-223832... 30 1.6
05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493... 29 3.7
03_05_0229 - 22142255-22142344,22142471-22142527,22142621-221427... 29 3.7
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 28 4.9
01_06_1309 - 36170947-36171077,36171227-36172198,36172285-361724... 28 4.9
01_04_0140 + 16572497-16572528,16572958-16573063,16573509-165735... 28 6.5
03_06_0368 - 33418918-33419031,33419132-33419530,33419680-334198... 27 8.5
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 244 bits (597), Expect = 4e-65
Identities = 112/173 (64%), Positives = 141/173 (81%)
Frame = +1
Query: 49 ASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLVTQARKMAQQYFL 228
A+NGVV+A K IL SV K++ T +IG+VYSGMGPD+R+LV ++RK AQQY+
Sbjct: 100 AANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYR 159
Query: 229 MYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWK 408
+Y E IP QLV+ A VMQE+TQSGGVRPFGVSLLI G+++ P L+Q DPSG+YF+WK
Sbjct: 160 LYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWK 219
Query: 409 ATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIXVGI 567
A+AMGKN +N KTFLEKRYTED+ELDDA+HTAILTLKEG+EGQ++A+NI +GI
Sbjct: 220 ASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGI 272
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 244 bits (597), Expect = 4e-65
Identities = 112/176 (63%), Positives = 142/176 (80%)
Frame = +1
Query: 40 GIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLVTQARKMAQQ 219
G A+NGVV+A K IL SV K++ T +IG+VYSGMGPD+R+LV ++RK AQQ
Sbjct: 60 GRGAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQ 119
Query: 220 YFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYF 399
Y+ +Y E IP QLV+ A VMQE+TQSGGVRPFGVSLLI G+++ P L+Q DPSG+YF
Sbjct: 120 YYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYF 179
Query: 400 AWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIXVGI 567
+WKA+AMGKN +N KTFLEKRYTED+ELDDA+HTAILTLKEG+EGQ++A+NI +G+
Sbjct: 180 SWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGV 235
>06_01_0539 + 3869156-3869908
Length = 250
Score = 128 bits (310), Expect = 2e-30
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHK-HKRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
A A+ G ++G+ A++GVVL K ++L + S K+ H+ +G+ D
Sbjct: 24 AMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDA 83
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR 360
+L+ AR AQ+Y L Y EPIP QLVQ + Q YTQ GG+RPFGVS L GW++
Sbjct: 84 NILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHH 143
Query: 361 PY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEG- 534
+ L+ DPSG Y WKA A+G N ++ L++ Y + + ++AV A+ L + +
Sbjct: 144 GFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDST 203
Query: 535 QMTADNI 555
+TA+ +
Sbjct: 204 SLTAEKL 210
>06_01_0529 + 3831100-3831852
Length = 250
Score = 128 bits (310), Expect = 2e-30
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHK-HKRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
A A+ G ++G+ A++GVVL K ++L + S K+ H+ +G+ D
Sbjct: 24 AMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDA 83
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR 360
+L+ AR AQ+Y L Y EPIP QLVQ + Q YTQ GG+RPFGVS L GW++
Sbjct: 84 NILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHH 143
Query: 361 PY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEG- 534
+ L+ DPSG Y WKA A+G N ++ L++ Y + + ++AV A+ L + +
Sbjct: 144 GFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDST 203
Query: 535 QMTADNI 555
+TA+ +
Sbjct: 204 SLTAEKL 210
>06_01_0479 + 3419657-3420337
Length = 226
Score = 128 bits (309), Expect = 3e-30
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVLAPAHK-HKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLL 189
A+ G ++G+ A++GVVL K ++L + S K+ H+ +G+ D +L
Sbjct: 3 AIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANIL 62
Query: 190 VTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPY- 366
+ AR AQ+Y L Y EPIP QLVQ + Q YTQ GG+RPFGVS L GW++ +
Sbjct: 63 LNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQ 122
Query: 367 LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEG-QMT 543
L+ DPSG Y WKA A+G N ++ L++ Y + L ++AV A+ L + + +T
Sbjct: 123 LYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLT 182
Query: 544 ADNI 555
A+ +
Sbjct: 183 AEKL 186
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 124 bits (299), Expect = 5e-29
Identities = 67/178 (37%), Positives = 101/178 (56%), Gaps = 2/178 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A AV G +VG++ ++ VVL K L + S+ K+ HI + +G+ D R
Sbjct: 93 ALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADAR 152
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWE--EG 357
+L+ +AR Q + L +P+ + + +A + Q+YTQSGGVRPFG+S LI G++
Sbjct: 153 VLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTE 212
Query: 358 RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFE 531
+P L+Q DPSG + AWKA A G+N N+ + FLEK Y +D + + AI L E E
Sbjct: 213 KPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KDTSGKETIKLAIRALLEVVE 269
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 123 bits (297), Expect = 9e-29
Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A AV G +VG++ S+ VVL K L + SV K+ HI + +G+ D R
Sbjct: 23 ALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADAR 82
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWE--EG 357
+L+ +AR Q + L + + + + +A + Q+YTQSGGVRPFG+S LI G++
Sbjct: 83 VLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTD 142
Query: 358 RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQ 537
+P L+Q DPSG + AWKA A G+N N+ + FLEK Y E + + AI L E E
Sbjct: 143 KPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGKETIKLAIRALLEVVES- 200
Query: 538 MTADNIXVGI-CDASGFRRL 594
NI + + G R+L
Sbjct: 201 -GGKNIEIAVMTQKDGLRQL 219
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 97.9 bits (233), Expect = 5e-21
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Frame = +1
Query: 4 AFAAV-AAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
AF AV +AG S+G++ + V + K L SV + T +IG++ +G+ D
Sbjct: 28 AFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADA 87
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGW-EEG 357
R LV QAR A ++ + +P L + +A Q YTQ +RP GV ++ G+ EE
Sbjct: 88 RSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEK 147
Query: 358 RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED--LELDDAVHTAILTLKEGFE 531
LF+CDP+G +F KAT+ G FLEK+ +D ++ V AI L+ +
Sbjct: 148 NAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQ 207
Query: 532 GQMTADNIXVGI 567
A I VG+
Sbjct: 208 EDFKATEIEVGV 219
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 93.1 bits (221), Expect = 2e-19
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A A+ G ++G+K +GVVLA + L SV K+ HIG SG+ D R
Sbjct: 40 AIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADAR 99
Query: 184 LLVTQARKMAQQYFLMYHEPIP---TAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEE 354
LV AR Q + Y EP+ T Q + +A E + RPFGVSLLI G +E
Sbjct: 100 TLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDE 159
Query: 355 GRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 477
P L+ DPSG ++ A A+G + L+++Y + L
Sbjct: 160 NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKSL 200
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 84.2 bits (199), Expect = 7e-17
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Frame = +1
Query: 4 AFAAVA-AGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
AF AV AG SVG++ + V + H+ + L+ ++ + T IG++ +GM D
Sbjct: 87 AFNAVKLAGITSVGVRGDDSVYVL-THRKEDKLHDPTTITNLFAITDRIGLLATGMPGDG 145
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEE-- 354
R + +AR A ++ + + L Q +A Q TQ +RP+GV +I G +E
Sbjct: 146 RAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDEEK 205
Query: 355 GRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKR 462
G P LF CDP+G +FA KAT+ G FLE+R
Sbjct: 206 GTPELFTCDPAGQFFAHKATSAGPKEKEVMNFLEER 241
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 80.6 bits (190), Expect = 9e-16
Identities = 44/145 (30%), Positives = 72/145 (49%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLV 192
AV G VGIK +G+VL + S ++ H G+ +G+ D R +V
Sbjct: 30 AVDNSGTVVGIKCKDGIVLGVEKLVTSKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIV 89
Query: 193 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLF 372
++A+ A Y +Y EP+P +L RVA+ + T +RPFG +++ G++ P L+
Sbjct: 90 SRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLY 149
Query: 373 QCDPSGAYFAWKATAMGKNFNNGKT 447
+PSG + + A+GK KT
Sbjct: 150 MIEPSGLSYKYFGAALGKGRQAAKT 174
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIG--------MVY 159
A AV G VGIK +G+VL + S ++ H G M
Sbjct: 27 ATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLDIILINVMAV 86
Query: 160 SGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLI 339
+G+ D R +V++A+ A Y +Y EPI +L RVA+ + T +RPFG +++
Sbjct: 87 AGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVIL 146
Query: 340 CGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAV 495
G++ P L+ +PSG + + A+GK KT +EK +L + +
Sbjct: 147 GGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGI 198
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 69.7 bits (163), Expect = 2e-12
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLV 192
AV G VG+++ VLA A+K L ++H KV H G+ +G+ D R+L
Sbjct: 3 AVKQGSACVGLRSRTHAVLAAANKAASEL-SSHQ-RKVFRVADHAGVALAGLTADGRVLS 60
Query: 193 TQARKMAQQYFLMYHEPI-------------------------PTAQL-VQRVAT-VMQE 291
R + +Y P+ PT L + V+ V+Q
Sbjct: 61 RFLRSECINHAFVYDAPLPVSRLALRLADKAQPDMYIFGITICPTTFLWIMSVSLMVLQV 120
Query: 292 YTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT- 468
TQ RP+GV LL+ G +E +L+ PSG YF ++A A+G KTFLE+R+
Sbjct: 121 CTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEG 180
Query: 469 -EDLELDDAVHTAILTLKEGFEGQ-MTADNIXVGI 567
D + + A+ +KE +G+ +T+ N V I
Sbjct: 181 YNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAI 215
>04_01_0631 + 8381361-8381560,8381918-8382020,8382604-8383497
Length = 398
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 277 TVMQEYTQSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKN 429
T QEYT +G R LI E PY +F C + A A+KA+ +GK+
Sbjct: 296 TPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGKD 347
>05_05_0100 +
22388457-22388561,22388657-22388808,22388897-22389270,
22389349-22390367
Length = 549
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 277 TVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 426
TV+ + + G+ L+ GW +G Y+ QC P G+Y ++ T G+
Sbjct: 73 TVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSY-VYRFTITGQ 123
>05_05_0099 -
22381586-22382604,22382683-22383056,22383145-22383296,
22383392-22383496
Length = 549
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 277 TVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 426
TV+ + + G+ L+ GW +G Y+ QC P G+Y ++ T G+
Sbjct: 73 TVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSY-VYRFTITGQ 123
>05_03_0257 +
11145558-11145876,11148181-11148347,11149114-11149311,
11149405-11149650
Length = 309
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 356 PSSQPQINRDTPKGRTPPDCVYSCMTVATRCTNCAV 249
PSS P++ P GR P C S +++T C AV
Sbjct: 6 PSSFPRVIALLPDGRRPSPCRSSSSSLSTACDRGAV 41
>03_05_0229 -
22142255-22142344,22142471-22142527,22142621-22142705,
22143552-22143677,22143750-22143793,22143877-22143999,
22144078-22144216,22148795-22151292
Length = 1053
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 55 NGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPD 177
+G+ + A K RIL+ H + +V H+ +V SG+ D
Sbjct: 420 HGIATSAAGKEIRILHQGHQLTEVMPELHHLSVVGSGLDVD 460
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 107 AAYSMRLCLCAGASTTPFDALMPTEGPPAATAAK 6
AA S+ CL A S P A PT PPA K
Sbjct: 72 AASSLERCLAASGSAAPASA--PTRAPPAMKGGK 103
>01_06_1309 -
36170947-36171077,36171227-36172198,36172285-36172413,
36172535-36172779,36172904-36173055,36173202-36173306
Length = 577
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 322 GVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 426
G+ L GW +G Y+ QC P G+Y +K T G+
Sbjct: 88 GIRQLRSGWADGPAYITQCPIQPGGSY-VYKYTITGQ 123
>01_04_0140 +
16572497-16572528,16572958-16573063,16573509-16573567,
16573615-16573681,16573964-16573989,16574787-16574913,
16576542-16576609,16577223-16577329,16577837-16577902,
16579332-16579438
Length = 254
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 204 PCLSHQ*TIVWTHSRVNHANV 142
PCL Q + W+H+ ++HANV
Sbjct: 103 PCLVSQESRSWSHANMHHANV 123
>03_06_0368 -
33418918-33419031,33419132-33419530,33419680-33419805,
33419880-33420096,33420178-33420272,33420840-33421060,
33421149-33421222,33421362-33421484,33421814-33421854,
33421933-33422134,33422245-33422504,33422669-33422798,
33423037-33423317
Length = 760
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 10 AAVAAGGPSVGIKASNGVVLAPAHKH 87
AAVA GGP +A VL P H H
Sbjct: 40 AAVATGGPDAAWEAVAAGVLRPEHPH 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,820,637
Number of Sequences: 37544
Number of extensions: 408198
Number of successful extensions: 1041
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -