Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J14
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 245 2e-65
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 115 2e-26
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 77 7e-15
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 28 4.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 4.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 4.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 4.4
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 28 4.4
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 28 4.4
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 245 bits (599), Expect = 2e-65
Identities = 119/199 (59%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A AV G PSVG++A +GVVLA + + KVE + HIG VYSGMGPD+R
Sbjct: 24 ALNAVKNGQPSVGLRAKDGVVLATENVGSVL---TDDQPKVEQISKHIGCVYSGMGPDFR 80
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEE--G 357
+LV +ARK+A +Y +MY E +PT QLV +A VMQEYTQSGGVRPFG SLLI GW++ G
Sbjct: 81 ILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPG 140
Query: 358 RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQ 537
RP LFQCDPSGAYFAWKATA+GKN N KTFLEKR++E LELDD +HTA+LTL+E F+
Sbjct: 141 RPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFDVG 200
Query: 538 MTADNIXVGICDASGFRRL 594
M +N+ V +C+++GF RL
Sbjct: 201 MNENNVEVAVCNSTGFHRL 219
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 115 bits (277), Expect = 2e-26
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKH-KRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
A A++ G +GI +S G+V+A K+ ++L + KV + +I +G+ D
Sbjct: 24 AMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADA 83
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR 360
+L+ R A Y Y E +P QLVQ + Q YTQ GG RPFGVSLL GW++
Sbjct: 84 NILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHY 143
Query: 361 PY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQ 537
Y L+Q DPSG Y WKAT +G N T L++ Y + L++A AI L + + +
Sbjct: 144 GYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEY-KSPNLEEAKQLAIKVLWKTLDVK 202
Query: 538 MTADNIXVGI 567
+ ++ + + +
Sbjct: 203 LASEKVEMAV 212
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 111 bits (267), Expect = 4e-25
Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLV 192
AV G +VG++ + +V+ K L ++ K+ H+ + ++G+ D R+LV
Sbjct: 26 AVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLV 85
Query: 193 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWE-EGRPYL 369
+AR Q Y L +P+ A + + +A Q +TQS G RPFG+S+LI G++ +G P L
Sbjct: 86 DRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRL 145
Query: 370 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDA 492
F+ +PSGAY+ + A A G+ + +LE++Y+E+ +D+A
Sbjct: 146 FKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEA 186
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 99 bits (238), Expect = 1e-21
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A AV G S+GIK S GV+LA + L ++ K+ HIG+ ++G+ D R
Sbjct: 27 AIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSR 86
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEY----TQSGGVRPFGVSLLICGWE 351
LV +A+ AQ ++ Y+ I + Q VA + ++ ++ RPFGV++L G +
Sbjct: 87 TLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVD 146
Query: 352 EGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFE 531
+ LF DPSG + KA ++G + + L+++Y + L + + + A+ LK+ E
Sbjct: 147 QEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVME 206
Query: 532 GQMTADNIXV 561
++ + N+ V
Sbjct: 207 EKLNSANVEV 216
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 77.4 bits (182), Expect = 7e-15
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Frame = +1
Query: 4 AFAAVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
A A+ G +VGIK+ V+ + + L ++H E T H G+ +G+ D R
Sbjct: 25 AVEAMKQGSATVGIKSETHAVIVALKRAQNDL-SSHQKKVYEIDT-HAGVSIAGLLSDGR 82
Query: 184 LLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRP 363
+L + + Y + +P +L + + +Q TQ G RPFGV +LI G+++
Sbjct: 83 ILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKDGA 142
Query: 364 YLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDLELDDAVHTAILTLKEGF--E 531
++ Q DPS + T++G + +T+LE+ E + + A+L L++ E
Sbjct: 143 HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAE 202
Query: 532 GQMTADNIXVGI 567
+ A N +GI
Sbjct: 203 ENLNAQNTSIGI 214
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 69.7 bits (163), Expect = 1e-12
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Frame = +1
Query: 13 AVAAGGPSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYRLLV 192
AV G + I+ NGVV+ LY ++ ++ ++G+ +G PD L
Sbjct: 30 AVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALK 89
Query: 193 TQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGW-EEGRPYL 369
A A ++ Y EP+P + VA + +T G RPFG W ++ L
Sbjct: 90 NYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAFFMSWNKQTGGRL 148
Query: 370 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTA 504
F +PSG + +KA A+GK+ K +EK E+L+++ V A
Sbjct: 149 FLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEA 193
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 66.5 bits (155), Expect = 1e-11
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Frame = +1
Query: 4 AFAAVAAGG-PSVGIKASNGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDY 180
AF A+ + +V +K ++ V+A + L A +V V + +G GM PD
Sbjct: 28 AFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDA 87
Query: 181 RLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGR 360
+ + +A+ A + +P L +++A + Q YTQ+ +R G +LL +++ +
Sbjct: 88 KFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEK 147
Query: 361 -PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL--DDAVHTAILTLKEGFE 531
P +++ DP+G Y K ++G +FLEK+ + EL +A+ AI L+
Sbjct: 148 GPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLG 207
Query: 532 GQMTADNIXVGIC--DASGFRRL 594
+ + ++ V + D S F +L
Sbjct: 208 IDVRSKDLEVVVVTKDNSKFTKL 230
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 322 GVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHT 501
G LLI G + P+L+ C +G A+ TA G T LE+ + D+ D+A
Sbjct: 141 GAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKL 200
Query: 502 AILTLKEGFEGQMTADN 552
L+ G G + N
Sbjct: 201 VQRALEAGMHGDNASGN 217
>Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical
protein K05D4.8 protein.
Length = 320
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 555 YVICSHLTLKTFLKGQDSGVNCVI*LQVFCISFFKES 445
Y++C+H LKTF DS C ++FC F K S
Sbjct: 270 YLVCNHRNLKTFFDSIDSRNVC----KLFCCPFSKGS 302
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 55 NGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
N AP +++ +L H +NK ++ M++ M PDY+
Sbjct: 308 NRAFSAP-NRYMELLSLCHIINKTNMDLQYVSMMFQFMDPDYK 349
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 244 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 152
S HD +RS+ G + P D+ +P P P
Sbjct: 2 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 32
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 244 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 152
S HD +RS+ G + P D+ +P P P
Sbjct: 110 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 140
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 244 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 152
S HD +RS+ G + P D+ +P P P
Sbjct: 110 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 140
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 244 SAHDTSRSTAGPSSLLESPVNDSLDPFPSKP 152
S HD +RS+ G + P D+ +P P P
Sbjct: 110 STHDDTRSSGGGDGTIHIPSADAKEPTPESP 140
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 55 NGVVLAPAHKHKRILYAAHSVNKVEXXTGHIGMVYSGMGPDYR 183
N AP +++ +L H +NK ++ M++ M PDY+
Sbjct: 308 NRAFSAP-NRYMELLSLCHIINKTNMDLQYVSMMFQFMDPDYK 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,402,791
Number of Sequences: 27780
Number of extensions: 321757
Number of successful extensions: 846
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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