Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J14
(594 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 27 0.18
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.2
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 9.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 9.1
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 9.1
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 9.1
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.6 bits (56), Expect = 0.18
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 178 SLDPFPSKPCQCGQLXXRLC*HCVQHTVCACVCALEQARRH 56
S+DP SK C G + C T+ CVC + RRH
Sbjct: 78 SIDPCASKYCGIG----KECELSPNSTIAVCVCMRKCPRRH 114
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 33 LTTNAWLKLEWVDYNLQW 50
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 33 LTTNAWLKLEWVDYNLQW 50
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 33 LTTNAWLKLEWVDYNLQW 50
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 33 LTTNAWLKLEWVDYNLQW 50
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 33 LTTNAWLKLEWVDYNLQW 50
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 33 LTTNAWLKLEWVDYNLQW 50
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 101 LTTNAWLKLEWVDYNLQW 118
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 137 LATLAWFTREWVQTIVYW 190
L T AW EWV + W
Sbjct: 101 LTTNAWLKLEWVDYNLQW 118
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 141 PHWHGLLG 164
P WHG+LG
Sbjct: 49 PMWHGILG 56
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 403 WKATAMGKNFNNGKTFLEKRYT 468
W A +NF + K +L +R+T
Sbjct: 424 WIAGLNEENFKDAKKYLPERWT 445
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 141 PHWHGLLG 164
P WHG+LG
Sbjct: 15 PMWHGILG 22
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 223 FLMYHEPIPTA 255
F+ +HEPIP A
Sbjct: 260 FINWHEPIPEA 270
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,336
Number of Sequences: 438
Number of extensions: 3951
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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