Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J11
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 283 1e-76
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 283 1e-76
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 283 1e-76
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 262 2e-70
AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical... 138 4e-33
AF038621-1|AAB94141.4| 89|Caenorhabditis elegans Hypothetical ... 96 2e-20
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical p... 29 4.9
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 28 8.6
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 28 8.6
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 28 8.6
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 283 bits (694), Expect = 1e-76
Identities = 126/218 (57%), Positives = 158/218 (72%)
Frame = +3
Query: 108 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 287
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 288 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 467
V +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + SA
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSA 121
Query: 468 APDVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKH 647
A D+GWPD FNSGVFV+ P+NET+ +L+ FA GS+DGGDQGLLN FFS+W
Sbjct: 122 ASDIGWPDSFNSGVFVYVPNNETYRQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHR 181
Query: 648 LPFLYNVTTAAFYSYLPXLKHYGQNLKIIHFIGAGKPW 761
LPF+YN+T AFY+Y K YG N KI+HFIG+ KPW
Sbjct: 182 LPFIYNMTAGAFYTYAAAYKRYGANTKIVHFIGSVKPW 219
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 283 bits (694), Expect = 1e-76
Identities = 126/218 (57%), Positives = 158/218 (72%)
Frame = +3
Query: 108 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 287
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 288 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 467
V +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + SA
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSA 121
Query: 468 APDVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKH 647
A D+GWPD FNSGVFV+ P+NET+ +L+ FA GS+DGGDQGLLN FFS+W
Sbjct: 122 ASDIGWPDSFNSGVFVYVPNNETYRQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHR 181
Query: 648 LPFLYNVTTAAFYSYLPXLKHYGQNLKIIHFIGAGKPW 761
LPF+YN+T AFY+Y K YG N KI+HFIG+ KPW
Sbjct: 182 LPFIYNMTAGAFYTYAAAYKRYGANTKIVHFIGSVKPW 219
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 283 bits (694), Expect = 1e-76
Identities = 126/218 (57%), Positives = 158/218 (72%)
Frame = +3
Query: 108 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 287
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 288 VLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSA 467
V +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + SA
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSA 121
Query: 468 APDVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKH 647
A D+GWPD FNSGVFV+ P+NET+ +L+ FA GS+DGGDQGLLN FFS+W
Sbjct: 122 ASDIGWPDSFNSGVFVYVPNNETYRQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHR 181
Query: 648 LPFLYNVTTAAFYSYLPXLKHYGQNLKIIHFIGAGKPW 761
LPF+YN+T AFY+Y K YG N KI+HFIG+ KPW
Sbjct: 182 LPFIYNMTAGAFYTYAAAYKRYGANTKIVHFIGSVKPW 219
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 262 bits (642), Expect = 2e-70
Identities = 118/216 (54%), Positives = 148/216 (68%)
Frame = +3
Query: 114 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 293
AW+TLATND Y GAL L +SL +G+ LIT +S ++R++L F EV VD+
Sbjct: 4 AWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEVTVVDIF 63
Query: 294 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAP 473
+S D+ +L+L+ RP+LG+TFTK HCW LTQY K VFLDAD ++I+N DELFER + SAA
Sbjct: 64 NSNDSENLSLIGRPDLGVTFTKFHCWRLTQYSKAVFLDADTMIIRNSDELFERPDFSAAA 123
Query: 474 DVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLP 653
D+GWPD FNSGVFVF PS + L+ A GSFDGGDQGLLN +FS+W LP
Sbjct: 124 DIGWPDMFNSGVFVFTPSLTVYRALLSLATSSGSFDGGDQGLLNEYFSNWRDLPSAHRLP 183
Query: 654 FLYNVTTAAFYSYLPXLKHYGQNLKIIHFIGAGKPW 761
F+YN+T FYSY + YG KI+HFIGA KPW
Sbjct: 184 FIYNMTAGEFYSYPAAYRKYGAQTKIVHFIGAQKPW 219
>AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical
protein Y73F8A.31 protein.
Length = 173
Score = 138 bits (334), Expect = 4e-33
Identities = 72/153 (47%), Positives = 93/153 (60%)
Frame = +3
Query: 213 LITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEK 392
LIT +S ++R+ L F EV VD +S D+ +L+L+ RP+L
Sbjct: 35 LITNEISNSVREELENKFDEVNIVDFFNSNDSENLSLIGRPDLA---------------- 78
Query: 393 CVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRG 572
VFLDAD ++I+NCDELFER + SAA D+GWPD FNSGVFVF PS + L+ A G
Sbjct: 79 -VFLDADTMIIRNCDELFERPDFSAAADIGWPDMFNSGVFVFTPSLTVYRALLALATSSG 137
Query: 573 SFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVT 671
SFD GDQGLL +FS+W LPF+YN+T
Sbjct: 138 SFDDGDQGLLIEYFSNWNDLSSAHRLPFIYNMT 170
>AF038621-1|AAB94141.4| 89|Caenorhabditis elegans Hypothetical
protein M116.2 protein.
Length = 89
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = +3
Query: 498 NSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTA 677
+SGVFVF PS + L+ A GSFDG DQGLLN++FS+W LPF+YN+T
Sbjct: 3 DSGVFVFTPSLTVYRALLALAISSGSFDGRDQGLLNAYFSNWRDLSSAHRLPFIYNMTAG 62
Query: 678 AFYSYLPXLKHYGQNLKIIHFIGAGK 755
FYSYL + YG +I+HFIGA K
Sbjct: 63 EFYSYLAAYRKYGAQTEIVHFIGARK 88
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 85.0 bits (201), Expect = 5e-17
Identities = 53/169 (31%), Positives = 89/169 (52%)
Frame = +3
Query: 114 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 293
A+V++ +++ + + A VLA+ L++ S P + ++T ++E + L+ + V V
Sbjct: 25 AFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELK---QQGVIVRND 81
Query: 294 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAP 473
D ++ + + +TKI W +T+++ V LD DIL ++ LFE A+
Sbjct: 82 TKIDTPYIKTHKARKY--QYTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS- 138
Query: 474 DVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSD 620
D FNSGVFV K + F + Q S+DGGDQG LN++FSD
Sbjct: 139 -FRHSDMFNSGVFVLKTNETVFHDMEQHVASAESYDGGDQGFLNTYFSD 186
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 85.0 bits (201), Expect = 5e-17
Identities = 53/169 (31%), Positives = 89/169 (52%)
Frame = +3
Query: 114 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 293
A+V++ +++ + + A VLA+ L++ S P + ++T ++E + L+ + V V
Sbjct: 25 AFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELK---QQGVIVRND 81
Query: 294 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAP 473
D ++ + + +TKI W +T+++ V LD DIL ++ LFE A+
Sbjct: 82 TKIDTPYIKTHKARKY--QYTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS- 138
Query: 474 DVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSD 620
D FNSGVFV K + F + Q S+DGGDQG LN++FSD
Sbjct: 139 -FRHSDMFNSGVFVLKTNETVFHDMEQHVASAESYDGGDQGFLNTYFSD 186
>Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical
protein D1086.10a protein.
Length = 177
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 430 IAMNSSSVKSYRLLPTWDGPTVSTPAFLSSNLQTKPSRN 546
+ ++++ S+ PT PTV T A ++ N ++ PS++
Sbjct: 10 LVLSATPTLSFTTAPTGTSPTVDTSAVIAPNPESSPSQS 48
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 203 RVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCSLV 78
RV RAG A R + +Q +V Q++PC + C ++
Sbjct: 615 RVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQGDQQRACEII 656
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 203 RVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCSLV 78
RV RAG A R + +Q +V Q++PC + C ++
Sbjct: 552 RVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQGDQQRACEII 593
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 496 STPAFLSSNLQTKPSRN 546
ST FL+SN+QTKPSR+
Sbjct: 142 STFLFLNSNMQTKPSRS 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,949,938
Number of Sequences: 27780
Number of extensions: 320531
Number of successful extensions: 948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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