Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J07
(625 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 25 0.68
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 23 1.6
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 22 4.8
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 22 4.8
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 22 4.8
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 22 4.8
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 8.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 8.4
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 8.4
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 8.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 8.4
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 24.6 bits (51), Expect = 0.68
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -3
Query: 257 TRNNF*YFTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AWICSS 78
T NF HT F +F+ I+L + + + V LF+ S R + +C+
Sbjct: 162 TSMNFVLLIGDLHTSIYIIFFDMFYQHHKIVLDMGKNCVTYVFDLFYLSKRA--SDLCNE 219
Query: 77 ICRL-IFFHGLKISSICHXQWNVV 9
+ I GLKI + NVV
Sbjct: 220 ANKTKILLVGLKIDIDQEEERNVV 243
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 57 SWPQNLQYLPQXVECC 10
S P NLQYLP + C
Sbjct: 166 SCPMNLQYLPMDRQLC 181
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 21.8 bits (44), Expect = 4.8
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 228 QKAHSAYPKFQPLVLQWSFHYPFHI 154
++ Y +FQ L L+ FH+ ++
Sbjct: 7 RRGRQTYTRFQTLELEKEFHFNHYL 31
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 186 EQVAETLDMLSV--LFGCEILKIIPGRVS 266
E VA+ L + +V EI K+IPGR++
Sbjct: 753 ENVAQYLQIENVEQTLNHEIKKVIPGRIT 781
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.8 bits (44), Expect = 4.8
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 228 QKAHSAYPKFQPLVLQWSFHYPFHI 154
++ Y +FQ L L+ FH+ ++
Sbjct: 158 RRGRQTYTRFQTLELEKEFHFNHYL 182
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.8 bits (44), Expect = 4.8
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 228 QKAHSAYPKFQPLVLQWSFHYPFHI 154
++ Y +FQ L L+ FH+ ++
Sbjct: 217 RRGRQTYTRFQTLELEKEFHFNHYL 241
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 228 QKAHSAYPKFQPLVLQWSFHY 166
++ +AY + Q L L+ FHY
Sbjct: 234 KRQRTAYTRHQILELEKEFHY 254
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 228 QKAHSAYPKFQPLVLQWSFHY 166
++ +AY + Q L L+ FHY
Sbjct: 234 KRQRTAYTRHQILELEKEFHY 254
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +2
Query: 14 HSTXCGRYW 40
H T C RYW
Sbjct: 108 HETSCTRYW 116
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 219 VLFGCEILKIIPGRV 263
+L GC IL PGR+
Sbjct: 282 ILGGCHILVATPGRL 296
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 228 QKAHSAYPKFQPLVLQWSFHY 166
++ +AY + Q L L+ FHY
Sbjct: 234 KRQRTAYTRHQILELEKEFHY 254
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,794
Number of Sequences: 336
Number of extensions: 3668
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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