Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J04
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 287 4e-78
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 287 6e-78
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 287 6e-78
04_01_0042 + 473912-474058,474208-474349,474442-476264 286 1e-77
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 220 1e-57
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 183 1e-46
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 181 4e-46
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 169 1e-42
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 29 2.7
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 2.7
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 29 4.7
01_01_0188 - 1631006-1631017,1631171-1631307,1631934-1632033 29 4.7
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 28 8.3
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 287 bits (705), Expect = 4e-78
Identities = 141/186 (75%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Frame = +3
Query: 147 AEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKLDSGK 326
+E ETFAFQAEI QL+SLIINTFYSN EIFLRELI NSS ALDKIR+ESLTD SKLD+
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
Query: 327 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 506
EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQF
Sbjct: 63 ELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
Query: 507 GVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKED 683
GVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R SGE LGRGTKI L++K+D
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182
Query: 684 LAXFME 701
++E
Sbjct: 183 QLEYLE 188
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 287 bits (704), Expect = 6e-78
Identities = 140/186 (75%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Frame = +3
Query: 147 AEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKLDSGK 326
+E ETFAFQAEI QL+SLIINTFYSN EIFLRELI NSS ALDKIR+ESLTD SKLD+
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
Query: 327 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 506
EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQF
Sbjct: 63 ELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
Query: 507 GVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKED 683
GVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R SGE LGRGTKI L++K+D
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182
Query: 684 LAXFME 701
++E
Sbjct: 183 QLEYLE 188
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 287 bits (704), Expect = 6e-78
Identities = 140/186 (75%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Frame = +3
Query: 147 AEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKLDSGK 326
+E ETFAFQAEI QL+SLIINTFYSN EIFLRELI NSS ALDKIR+ESLTD SKLD+
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
Query: 327 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 506
EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQF
Sbjct: 63 ELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
Query: 507 GVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKED 683
GVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R SGE LGRGTKI L++K+D
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182
Query: 684 LAXFME 701
++E
Sbjct: 183 QLEYLE 188
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 286 bits (701), Expect = 1e-77
Identities = 140/190 (73%), Positives = 163/190 (85%), Gaps = 1/190 (0%)
Frame = +3
Query: 135 ETQPAEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKL 314
+ Q AE ETFAFQAEI QL+SLIINTFYSN EIFLRELI NSS ALDKIR+ESLTD SKL
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL 65
Query: 315 DSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISM 494
D+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SM
Sbjct: 66 DAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQAGADVSM 125
Query: 495 IGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLH 671
IGQFGVGFYS+YLVA++V V +KHNDDEQYVWES AGGSFTV D +GE LGRGTKI L
Sbjct: 126 IGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITLF 185
Query: 672 VKEDLAXFME 701
+K+D ++E
Sbjct: 186 LKDDQLEYLE 195
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 220 bits (537), Expect = 1e-57
Identities = 110/192 (57%), Positives = 143/192 (74%), Gaps = 3/192 (1%)
Frame = +3
Query: 135 ETQPAEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKL 314
+T + E F FQAE+++LM +IIN+ YSN +IFLRELI N+S ALDKIR+ +LTD L
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVL 157
Query: 315 DSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADI 488
G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q G D+
Sbjct: 158 GEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDL 217
Query: 489 SMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIV 665
++IGQFGVGFYS YLVAD V V SKHNDD+Q+VWES A GSF + D+ EPLGRGT+I
Sbjct: 218 NLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIR 277
Query: 666 LHVKEDLAXFME 701
LH++++ ++E
Sbjct: 278 LHLRDEAKEYVE 289
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 183 bits (446), Expect = 1e-46
Identities = 94/185 (50%), Positives = 132/185 (71%), Gaps = 8/185 (4%)
Frame = +3
Query: 153 VETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKLDSGKEL 332
VE +QAE+ +LM LI+++ YSN E+FLREL+ N+S ALDK+RY S+TDP + G L
Sbjct: 352 VEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKLRYLSVTDPDLIKDGAGL 411
Query: 333 YIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL----QAGADISMIG 500
I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT F++AL +AG D ++IG
Sbjct: 412 DIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFLKALKESQEAGVDSNLIG 471
Query: 501 QFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSFTVR--PDSGEPLGRGTKIVL 668
QFGVGFYS++LV+D+V V +K D+QYVWE A S+T+R D + L RGT++ L
Sbjct: 472 QFGVGFYSAFLVSDKVAVSTKSPKSDKQYVWEGEAESSSYTIREETDPEKLLPRGTRLTL 531
Query: 669 HVKED 683
++K +
Sbjct: 532 YLKRE 536
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 181 bits (441), Expect = 4e-46
Identities = 97/193 (50%), Positives = 134/193 (69%), Gaps = 8/193 (4%)
Frame = +3
Query: 129 EMETQPAEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPS 308
E + AE E F +QAE+++LM LI+++ YS+ E+FLREL+ N+S ALDK+R+ +TD S
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLGVTDSS 392
Query: 309 KLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ----A 476
L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 393 LLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALKENKDL 452
Query: 477 GADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSAGGSFTVRPDSGEP---L 644
GAD +IGQFGVGFYS++LVA++V V +K D+QYVWE A S V + +P L
Sbjct: 453 GADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWEGVADSSSYVIKEETDPEKML 512
Query: 645 GRGTKIVLHVKED 683
RGT+I L ++ D
Sbjct: 513 TRGTQITLVLRPD 525
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 169 bits (412), Expect = 1e-42
Identities = 95/198 (47%), Positives = 134/198 (67%), Gaps = 17/198 (8%)
Frame = +3
Query: 141 QPAEVETFAFQAEIAQLMSLIINTFYSNXEIFLRELIXNSSXALDKIRYESLTDPSKLDS 320
+ A E F +QAE+++L+ LI+++ YS+ E+FLREL+ N+S ALDK+R+ S+TD S L
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSD 137
Query: 321 GKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 473
G EL I+I P+ GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 138 GGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTIAQSGTSKFLKALK 197
Query: 474 ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSAGGSFTVRPDSGE 638
GAD +IGQFGVGFYS++LVA++V V +K D+QYVWE+ A S V + +
Sbjct: 198 ENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVWEAMADSSSYVIKEETD 257
Query: 639 P---LGRGTKIVLHVKED 683
P L RGT+I L +++D
Sbjct: 258 PEKMLTRGTQITLFLRDD 275
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +3
Query: 378 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVG 515
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVG 150
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 326 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 493
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
Length = 356
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 41 ILCAXKHVCSKTLXSXCVN*TKSSKENAGXNGDTASGG 154
+ A HV S + S V + + EN G NGDTA+GG
Sbjct: 280 LAAAVGHVSSVGVTSSTVG-SAPAAENDGGNGDTAAGG 316
>01_01_0188 - 1631006-1631017,1631171-1631307,1631934-1632033
Length = 82
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 436 AMVPKLFTKSALVIPIPVSMIVRVPSFLLGMILMYSSLPLSSFDGSVRDSYLILSKA 266
AM P L +S + P P S I+++ LG+ L+ +P D ++ +I KA
Sbjct: 24 AMTP-LHDRSRGIWPCPASAILKIYFHALGLFLLLICVPNGGADTGIQQLKIIKKKA 79
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 597 SAGGSFTVRPDSGEPLGRGTK 659
SA G+ RP + PLGRGT+
Sbjct: 19 SAAGAVVGRPSTARPLGRGTR 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,662,945
Number of Sequences: 37544
Number of extensions: 408226
Number of successful extensions: 987
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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