Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_J02
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.50 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.88 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.5  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.2  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -2

Query: 180 GISQKPSISSSRNLLRDI 127
           G SQ PSISS+  LLR+I
Sbjct: 280 GPSQDPSISSTETLLRNI 297


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
 Frame = +2

Query: 287 ETSFSPQIYQYSSPVNEHVTN-------IVNRQPEISNPQPSTSGMTSRYNTRFNYKYH 442
           E + +P+I Q  S + +H ++       I N+Q   + P   T  + S+YN   N   H
Sbjct: 54  EVNNTPEILQLMSDLKQHQSDDPVLSQIIANKQSGAAAPDARTQRVWSQYNFTNNVLVH 112


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 143 LRDEDIEGF---WDIPSGSEDGQDF 208
           LRD   +G    W+ P GSED +++
Sbjct: 198 LRDRGFDGLDIDWEYPKGSEDKKNY 222


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 326 PVNEHVTNIVNRQPEISNPQPSTSGMTSRYNT 421
           PV    + I+N QP+I++P  +T+  TS  N+
Sbjct: 408 PVPPMQSQIINPQPQITSPS-NTNTSTSSTNS 438


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
 Frame = -3

Query: 251 WTEPFRCHHHFQHQKNLDHLHSQKEYPR---NLQYLH 150
           W        +  H+  L HLH  K  P     LQ+LH
Sbjct: 95  WWHELETKFNPHHEIKLQHLHQSKFNPHEEVKLQHLH 131


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = +2

Query: 101 QRSVYFEEIMSRRRLRDEDIEGF---WDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSE 271
           +R  +   ++S   +   + +GF   W+ P  ++ G  FSD   D     V  +R    +
Sbjct: 120 RRDAFIRSVISF--MNQYEFDGFDLDWEYPGAADRGGSFSD--KDKFFYFVGELRRAFDK 175

Query: 272 PLSNVETSFSPQIYQYSSPVNEHVTNI 352
              N E + +  I ++      HV  +
Sbjct: 176 EGKNWEITMAVPIAKFRLQEGYHVPEL 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 285 WKLPSLRKYISI 320
           WK+PSL +++S+
Sbjct: 149 WKMPSLSEFLSL 160


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 285 WKLPSLRKYISI 320
           WK+PSL +++S+
Sbjct: 149 WKMPSLSEFLSL 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,729
Number of Sequences: 336
Number of extensions: 4051
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)