Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_J02
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0512 - 24460391-24462337                                         30   1.8  
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866     30   1.8  
11_06_0182 + 20997071-20997832,20998010-20998150                       29   3.1  
10_01_0075 - 979335-979954,980136-980405,980949-980989,981563-98...    29   3.1  
01_05_0167 + 18849791-18849973,18850081-18850250,18850341-188504...    29   4.1  
09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751     28   9.4  
03_05_1007 - 29637911-29638333,29640095-29640282,29640688-296407...    28   9.4  

>11_06_0512 - 24460391-24462337
          Length = 648

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
 Frame = +2

Query: 194 DGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFSP---QIYQYSSPVNEHVTNIVNRQ 364
           D + F  AES  D+ ++ SIR+ + E L  +         +I     P+ E V +++N  
Sbjct: 38  DAKSFRGAESSSDLAQLDSIRDMMRE-LQAIFVKMGENERRIVHLFDPIEELVDDVLNSL 96

Query: 365 P---EISNPQPSTSGM 403
               EIS  QP  +G+
Sbjct: 97  AAGGEISTLQPKLAGV 112


>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
          Length = 785

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
 Frame = +2

Query: 128 MSRRRLRDEDIEGFWDIPSGSEDGQDFS-DAESDDDIEKVQSIRNFLSEPLS--NVETSF 298
           M  RRL  E  E   +I SG ED   F  D E D ++ K Q   +F  +  S  N  +  
Sbjct: 584 MEARRLAIEREESSTEIDSGDEDAIQFELDCEDDHEMLKAQPAYHFELKGGSSRNPLSKL 643

Query: 299 SPQIYQYSSPVNEHVTNI--VNRQPEISNPQPSTSGMTSRYN-TRFNYKYHCTISGT*TI 469
              I +    + E  +N   +     I+   P+ S +++  N  R   K  C +     I
Sbjct: 644 DEAIEEEEDDIEEEESNAEKLGYPKAINKWLPNISKLSTSLNGVRLGDKIQCQLPAAPKI 703

Query: 470 ID 475
           +D
Sbjct: 704 MD 705


>11_06_0182 + 20997071-20997832,20998010-20998150
          Length = 300

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 146 RDEDIEGFWDIPSGSEDGQDFSDAESDDDIE 238
           R +D+   WD+P G ED     D+ES+ D E
Sbjct: 215 RSDDLPK-WDVPEGDEDDDHSFDSESEFDSE 244


>10_01_0075 -
           979335-979954,980136-980405,980949-980989,981563-981663
          Length = 343

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 227 HHFQHQKNLDHLHSQKEYPRN 165
           HH QHQ+ + H H Q  +PR+
Sbjct: 104 HHHQHQQYVPHHHHQPHHPRD 124


>01_05_0167 +
           18849791-18849973,18850081-18850250,18850341-18850413,
           18850729-18850839,18850947-18850992,18851085-18851148,
           18851810-18851912,18851999-18852094,18852186-18852215,
           18852434-18852533,18852761-18852845,18852965-18853088
          Length = 394

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 161 EGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSE 271
           E F+   SGSED +  S +  DDD E+ +     + E
Sbjct: 43  ESFYSARSGSEDDRQVSSSNDDDDSEEEEQEEREMDE 79


>09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751
          Length = 575

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3

Query: 200 DHLHSQKEYPRNLQ 159
           DH H  +EYPRNLQ
Sbjct: 516 DHYHFAREYPRNLQ 529


>03_05_1007 -
           29637911-29638333,29640095-29640282,29640688-29640773,
           29641108-29641173,29641289-29641331,29641398-29642328
          Length = 578

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 92  SVLQRSVYFEEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDD 229
           +VLQ S  F++ +      + ++ G   IP G E+   FSD E DD
Sbjct: 533 NVLQES--FDDDIDDWFDEEAELSGHTTIPIGDEEDVSFSDLEDDD 576


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,588,991
Number of Sequences: 37544
Number of extensions: 381235
Number of successful extensions: 1124
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)