Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_J02
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_27973| Best HMM Match : Fe-ADH (HMM E-Value=5.6e-06) 31 1.4
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 30 1.8
SB_54304| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_54201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 29 5.5
SB_25873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 5.5
SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1) 29 5.5
SB_30159| Best HMM Match : zf-C3HC (HMM E-Value=3) 28 7.2
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 28 7.2
SB_12785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_6443| Best HMM Match : TSP_C (HMM E-Value=0) 28 7.2
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_24872| Best HMM Match : efhand (HMM E-Value=0.48) 28 7.2
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 9.5
SB_39014| Best HMM Match : TPR_2 (HMM E-Value=0.19) 28 9.5
SB_37649| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_23043| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_8943| Best HMM Match : LTXXQ (HMM E-Value=0.45) 28 9.5
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 176 IPSGSEDG-QDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFS 301
+ S EDG +D+ D + DDD E+V+ I L + S+ +TS+S
Sbjct: 896 LDSNEEDGEEDYDDDDEDDDEEEVEPI--ILPDKFSSPKTSYS 936
>SB_27973| Best HMM Match : Fe-ADH (HMM E-Value=5.6e-06)
Length = 324
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +2
Query: 152 EDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFSPQIYQYSSPV 331
+D + + D + D +D DD E + +S P+S + S+ + Y S P+
Sbjct: 183 DDYDDYGDDGDNGDYEIDVNDENGDDSDECENDESHGMSYPISGLVKSYKAKDYDPSHPI 242
Query: 332 NEHVTNIVNRQPEI 373
H ++V P +
Sbjct: 243 VPHGLSVVVTAPAV 256
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 230 HHHFQHQKNLDHLHSQKEYPRNLQYLHH 147
H H Q Q+N H H QK+ +N Y HH
Sbjct: 580 HRHHQKQQNQHHRHHQKK--QNQHYRHH 605
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 227 HHFQHQKNLDHLHSQKEYPRNLQYLHH 147
HH Q Q+N H H QK+ +N + HH
Sbjct: 570 HHHQKQQNQHHRHHQKQ--QNQHHRHH 594
>SB_54304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 144 NLLRDIISSKYTLRCSTEF-FWSQNCS 67
+L+ D ++KY+L CS E FW NC+
Sbjct: 241 DLIFDFSANKYSLECSREIEFWLDNCN 267
>SB_54201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/94 (21%), Positives = 39/94 (41%)
Frame = +2
Query: 104 RSVYFEEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSN 283
R E+++++R R+E + +DG D + E D D + + + +
Sbjct: 163 REKVMAEVLAKQRRREERARRVRERAKRIQDGDDMGNIEVDPDETYNADEEDEMWDLEPS 222
Query: 284 VETSFSPQIYQYSSPVNEHVTNIVNRQPEISNPQ 385
+TS + Q P +E ++ N + NPQ
Sbjct: 223 AQTSKASSFQQSPDPDSEEEDDLNNNKALDENPQ 256
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 236 RCHHHFQHQKN-LDHLHSQKEYPRNLQYLHH 147
R HHH HQ N H H + + Q+ HH
Sbjct: 44 RYHHHHHHQHNHHQHHHHHNHHHHHQQHHHH 74
>SB_25873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 149 DEDIEGFWDIPSGSEDGQDFSDAESDDDIEKV 244
D+D E +D G D D SD ESD + E V
Sbjct: 111 DDDGEEVYDDGQGGVDDDDISDEESDGESEMV 142
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 248 TEPFRCHHHFQHQKNLDHLHSQKEYPRNLQYLHH 147
T P+R HHH H+ + H H + R+ H
Sbjct: 304 TPPYRYHHHHHHRHHHHHHHHHHQRHRHRHRHRH 337
>SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 782
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 116 FEEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETS 295
FE++++ +DE + F D+ E+ Q+F D E + K + +R ++ T
Sbjct: 562 FEDVVASSEDKDEPLPDFEDVKEPEEEFQEFVDEEG--RVVKRRIVRRTVTTKTLTTRTV 619
Query: 296 FSPQIYQYSSPVNE 337
S Q P E
Sbjct: 620 TSDQAGPEEMPTEE 633
>SB_30159| Best HMM Match : zf-C3HC (HMM E-Value=3)
Length = 440
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 187 PRRNIPETFNIFITQSSSRHYLFKIYTSLQHRIFLESKLFNNYF 56
P RN +FN+FIT H++F+ + +F +K N F
Sbjct: 104 PTRNNYVSFNVFITPKVKSHFVFRDIFTDSLLVFRTAKEANRLF 147
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 230 HHHFQHQKNLDHLHSQKEYPRNLQYLHH 147
HHH HQ N H H + + Y H+
Sbjct: 217 HHHHHHQHNHHHHHHNHHHHHHHHYHHY 244
>SB_12785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 152 EDIEGFWDIPSGSEDGQDFSDAESDDDIEKV 244
+D+E D+ +DG+D D E DDD++ V
Sbjct: 13 DDVEDDDDVED-DDDGEDDDDGEDDDDVKMV 42
>SB_6443| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 521
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 149 DEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEP 274
D+D + D +D D +D ++DDD E V S+ N + P
Sbjct: 15 DDDDDDDDDDDDDDDDDDDDADDDADDDDENVDSVDNCVLIP 56
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 146 RDEDIEGFWDIPSGSEDGQDFSDAESDDD 232
RD+D+EG+ D S +D D +D DDD
Sbjct: 392 RDDDVEGYGDDDSDIDD--DVNDNNDDDD 418
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 119 EEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSN-VETS 295
+E+ +RLRDE+ S EDG +D + + R F EP V
Sbjct: 2089 QELEEIQRLRDEEARRKKSDSSDDEDGAPITDKPQSVNKLDLSQFRQFQKEPEPEPVPRK 2148
Query: 296 FSPQIYQYSSPVNE 337
S + Q+ SP E
Sbjct: 2149 LSVKRQQHVSPPKE 2162
>SB_24872| Best HMM Match : efhand (HMM E-Value=0.48)
Length = 412
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 89 NSVLQRSVYFEEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDD 232
N+ L V+F + ++++D D+ + +D +D +DA+ DDD
Sbjct: 104 NTPLFLLVFFIRTSKQDNIQNDDCNYDDDVTAEDDDDEDDNDADDDDD 151
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 143 LRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFSPQIYQYS 322
L +ED + + GS++ QD DA DDD+ N PL + F+ +IYQ++
Sbjct: 298 LEEEDDQAMYQATEGSQEDQD-DDAGGDDDVGGEDDAEN----PLMML---FN-EIYQHT 348
Query: 323 SPVNEHVTNIVNRQP 367
P + R P
Sbjct: 349 DPTGRPMVEPFLRLP 363
>SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 27.9 bits (59), Expect = 9.5
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = +2
Query: 101 QRSVYFEEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLS 280
Q+ +Y++ R + GF +P + ES +D +++IRN L E L+
Sbjct: 519 QQKIYYQP---SRYQKPAGPSGFTPVPPTTPSNTPIQGLESIEDNMNLEAIRNALREDLT 575
Query: 281 NVE-TSFSPQIYQYSSPVNEHVTNIVNRQPEISNPQPSTSGMTSRYNTR 424
E S S+P H R P N P +S S Y R
Sbjct: 576 PAEGRPPSSGSSGRSTPTRWH-----PRTPGSGNSSPCSSSTNSPYVVR 619
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 EEIMSRRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIE 238
E++ S DEDI+ D G E+ SD E+DDD E
Sbjct: 143 EDVESNNN-EDEDIQEVEDDNEGKENDGGESDEENDDDDE 181
>SB_39014| Best HMM Match : TPR_2 (HMM E-Value=0.19)
Length = 1036
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 188 SEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFS 301
S+D +D SD DDD + S N L EP++ S S
Sbjct: 629 SDDSED-SDDIEDDDFSDLPSEENNLDEPVTKTRASTS 665
>SB_37649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 275 LSNVETSFS-PQIYQYSSPVNEHVTNIVNRQPEISNPQPSTSGMTSR 412
+ + TS S P Y YS NEHV +++ + PQPST S+
Sbjct: 17 VDEINTSSSKPAEYYYSDEWNEHVDEVLS---SFAVPQPSTQTSQSQ 60
>SB_23043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 156 ILKVSGIFLLGVKMVKIFLMLKVMMTSKRFSPSETFYQSHSATWKLPSLRKYISIRLP 329
+L V GI K+ M +T ++ + E FY+ + +P + ++S++LP
Sbjct: 13 VLDVCGIKCEQPKLTTTRKMRSDALTDEQVTEIEEFYRRDDISQMMPGNKDFVSVKLP 70
>SB_8943| Best HMM Match : LTXXQ (HMM E-Value=0.45)
Length = 415
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 156 ILKVSGIFLLGVKMVKIFLMLKVMMTSKRFSPSETFYQSHSATWKLPSLRKYISIRLP 329
+L V GI K+ M +T ++ + E FY+ + +P + ++S++LP
Sbjct: 13 VLDVCGIKCEQPKLTTTRKMRSDALTDEQVTEIEEFYRRDDISQMMPGNKDFVSVKLP 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,277,336
Number of Sequences: 59808
Number of extensions: 469808
Number of successful extensions: 1987
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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