Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I23
         (397 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep: CG90...    44   0.001
UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1; ...    33   1.5  
UniRef50_UPI00006D00D7 Cluster: ABC transporter family protein; ...    32   4.6  
UniRef50_A5AIG1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.1  

>UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep:
           CG9034-PA - Drosophila melanogaster (Fruit fly)
          Length = 77

 Score = 43.6 bits (98), Expect = 0.001
 Identities = 19/32 (59%), Positives = 21/32 (65%)
 Frame = +3

Query: 216 NYVKNDGDNRRYKGTYVVMRPDDPRVKLIRKE 311
           NY   DGDNRRYK  YVV R DDPR   +R +
Sbjct: 43  NYYAKDGDNRRYKLGYVVYRHDDPRALKVRND 74


>UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 418

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +2

Query: 206 WSIQLREERWRQ*KVQGYLCGDEAGRPKSEAYTQGVXLKLNILPVLFV 349
           W+I    E W + KV  +  GDE GR   EAY Q   LKL     LF+
Sbjct: 34  WTINFDYEAWAKDKV--FHVGDELGRDAEEAYIQRTPLKLQ-FETLFI 78


>UniRef50_UPI00006D00D7 Cluster: ABC transporter family protein;
           n=1; Tetrahymena thermophila SB210|Rep: ABC transporter
           family protein - Tetrahymena thermophila SB210
          Length = 688

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 155 LQGSRSIPVELAVQAIFSKPQPFIY-ACRPYFKSIELLNIFSS 30
           LQGS  I  E+    IF K   FIY A R YF  ++ + IF S
Sbjct: 145 LQGSEQIGKEIQYGRIFQKINQFIYFASRAYFIYVQSVQIFIS 187


>UniRef50_A5AIG1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 348

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +2

Query: 134 GWNEIPANFCLNRLRS-CWYWSGCSWSIQLREER 232
           G    P  FC  R    CW WS C W   L  +R
Sbjct: 228 GMTNAPTTFCTVRSPGICWLWSWCKWKRHLMGKR 261


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,142,305
Number of Sequences: 1657284
Number of extensions: 6628221
Number of successful extensions: 14796
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14795
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)