Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I23
         (397 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.5  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   1.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   7.7  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 210 AYNYVKNDGDNRRYKGTYVVMRPDD 284
           A  +++  GD  + KGTY    PD+
Sbjct: 347 AGKHLRKVGDPSKRKGTYAFRTPDE 371


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 216 NYVKNDGDNRRYKGTYVVMRPDDPRVKLIRKE 311
           +YV+ D D RR+     ++ P+  ++KL   E
Sbjct: 146 DYVERDTDIRRFLIKVTILHPNIVKLKLDTSE 177


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 155 NFCLNRLRSCWYWSGCSWSIQLREERWRQ*KVQGYL 262
           N C +   S  Y+ GC  S+ L EE  +  K+  YL
Sbjct: 83  NLCRSECFSTKYFVGCVESLLLSEEMPKFRKMIEYL 118


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 119 QLIQQGWNEI 148
           QL++ GWNE+
Sbjct: 245 QLLRAGWNEL 254


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 143 RSIPVELAVQAIFSKPQPFIYACRPYFKSIELLN 42
           R +PV ++   IF +  PF +  R     IE LN
Sbjct: 172 RFLPVYVSYLLIFVQQIPFCFFVRVIRLKIEDLN 205


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 222 VKNDGDNRRYKGTYVVMRPDD 284
           VK   D  + KG+Y+   PD+
Sbjct: 359 VKRVPDPSKRKGSYIFRLPDE 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,466
Number of Sequences: 336
Number of extensions: 1689
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)