Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_I19
(586 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4RPG4 Cluster: Chromosome 12 SCAF15007, whole genome s... 200 1e-50
UniRef50_Q9Y2T2 Cluster: AP-3 complex subunit mu-1; n=59; Eukary... 197 2e-49
UniRef50_Q7ZTW0 Cluster: Ap3m1 protein; n=1; Danio rerio|Rep: Ap... 128 1e-28
UniRef50_Q8LPJ0 Cluster: Clathrin-associated protein, putative; ... 83 5e-15
UniRef50_Q013N7 Cluster: Adapter-related protein complex 3 mu 1 ... 73 7e-12
UniRef50_A2DA54 Cluster: Adaptor complexes medium subunit family... 67 2e-10
UniRef50_Q1EQ15 Cluster: Mu subunit isoform a; n=1; Entamoeba hi... 66 8e-10
UniRef50_Q5KLY0 Cluster: Adaptor complex subunit medium chain 3,... 61 2e-08
UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family... 57 3e-07
UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba ... 56 8e-07
UniRef50_Q583J1 Cluster: Mu-adaptin 3, putative; n=3; Trypanosom... 54 2e-06
UniRef50_A2E9B8 Cluster: Adaptor complexes medium subunit family... 52 8e-06
UniRef50_Q6CC50 Cluster: Yarrowia lipolytica chromosome C of str... 50 3e-05
UniRef50_A2ER69 Cluster: Adaptor complexes medium subunit family... 48 1e-04
UniRef50_Q4N810 Cluster: Adaptin medium chain, putative; n=2; Th... 43 6e-04
UniRef50_Q99186 Cluster: AP-2 complex subunit mu; n=2; Saccharom... 46 9e-04
UniRef50_A2DJF7 Cluster: Adaptor complexes medium subunit family... 45 0.002
UniRef50_Q6CUL9 Cluster: Similar to sp|Q99186 Saccharomyces cere... 45 0.002
UniRef50_A7AS46 Cluster: Clathrin coat adaptor subunit, putative... 44 0.002
UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep: F20B... 44 0.004
UniRef50_Q4Q1B6 Cluster: Clathrin coat assembly protein-like pro... 44 0.004
UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6; A... 43 0.005
UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1; Schizosac... 42 0.008
UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6; Sacchar... 41 0.025
UniRef50_A3LVW0 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 41 0.025
UniRef50_Q4Q2T6 Cluster: Adaptor complex subunit medium chain 3,... 40 0.033
UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=... 40 0.057
UniRef50_Q4P2F1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.057
UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=... 39 0.076
UniRef50_Q00U04 Cluster: Clathrin adaptor complexes medium subun... 39 0.076
UniRef50_Q24HW4 Cluster: Adaptor complexes medium subunit family... 39 0.076
UniRef50_A3ZSS4 Cluster: X-Pro dipeptidyl-peptidase; n=1; Blasto... 39 0.100
UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas ... 38 0.17
UniRef50_A2DPT4 Cluster: Adaptor complexes medium subunit family... 38 0.17
UniRef50_Q9SB50 Cluster: Clathrin coat assembly like protein; n=... 37 0.30
UniRef50_Q550G8 Cluster: Clathrin-adaptor medium chain apm 4; n=... 36 0.53
UniRef50_Q6CMN9 Cluster: Similar to sp|P38153 Saccharomyces cere... 36 0.53
UniRef50_Q59RK0 Cluster: Potential clathrin-associated protein A... 36 0.53
UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.53
UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit, pu... 36 0.70
UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putativ... 34 2.2
UniRef50_Q4P6W3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_A5DI41 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q6BJ55 Cluster: Similar to CA1432|CaAPM3 Candida albica... 34 2.8
UniRef50_A7HCT3 Cluster: Cell surface receptor IPT/TIG domain pr... 33 5.0
UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=... 33 5.0
UniRef50_Q5ACY9 Cluster: Potential clathrin-associated protein A... 33 5.0
UniRef50_A4R5S4 Cluster: Predicted protein; n=1; Magnaporthe gri... 33 5.0
UniRef50_A0LGK7 Cluster: Extracellular ligand-binding receptor p... 33 6.6
UniRef50_A4RV57 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 6.6
UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family... 33 6.6
UniRef50_A7TDP1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q1NA24 Cluster: TonB-dependent receptor; n=1; Sphingomo... 32 8.7
UniRef50_O29505 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q750L8 Cluster: AP-3 complex subunit mu; n=1; Eremothec... 32 8.7
>UniRef50_Q4RPG4 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=4; Eumetazoa|Rep: Chromosome 12
SCAF15007, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2294
Score = 200 bits (489), Expect = 1e-50
Identities = 88/165 (53%), Positives = 125/165 (75%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P G+FRLLS H+ SQ++VA+P+ V+H + +QGR LT+GPKQ MG+ +E+V +
Sbjct: 298 PDGNFRLLSYHVSSQNLVAIPVYVKHNITFREGSSQGRFDLTLGPKQTMGKGVESVLVSS 357
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
+P+ VLN L +QG Y++DPV+KML WD+G+I KLP++KG++S+ +GA +P+
Sbjct: 358 QLPRGVLNVSLNPSQGTYTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPT 417
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVR 517
IN+ F I Q+A+SGL+V+RLDMYG KYKPFKG+KY+TKAGKF VR
Sbjct: 418 INIQFKIQQMAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVR 462
>UniRef50_Q9Y2T2 Cluster: AP-3 complex subunit mu-1; n=59;
Eukaryota|Rep: AP-3 complex subunit mu-1 - Homo sapiens
(Human)
Length = 418
Score = 197 bits (480), Expect = 2e-49
Identities = 89/165 (53%), Positives = 121/165 (73%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P G+FRL+S + SQ++VA+P+ V+H + + GR +T+GPKQ MG+ +E + +
Sbjct: 253 PDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPKQNMGKTIEGITVTV 312
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
MPK VLN LT QG Y++DPV+K+L WD+G+I KLP++KG V++ SGA +PS
Sbjct: 313 HMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQKLPSLKGLVNLQSGAPKPEENPS 372
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVR 517
+N+ F I QLA+SGL+V+RLDMYG KYKPFKGVKYVTKAGKF VR
Sbjct: 373 LNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVR 417
>UniRef50_Q7ZTW0 Cluster: Ap3m1 protein; n=1; Danio rerio|Rep: Ap3m1
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 180
Score = 128 bits (309), Expect = 1e-28
Identities = 59/98 (60%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Frame = +2
Query: 233 LTANQGKYSYDPVSKMLLWDIGRIE---LPKLPNIKGSVSVVSGADTTGASPSINVHFTI 403
+ A QG Y YDP++K+L+WDIG++ K PN+KGS+S+ SGA +PS+N+ I
Sbjct: 82 INATQGTYKYDPLTKILVWDIGKLNPQNTQKQPNLKGSLSLQSGAPKPEENPSLNIDLKI 141
Query: 404 PQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVR 517
QLA+SGL+V+RLDMYG KYKPFKGVKYVTKAGKF VR
Sbjct: 142 QQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVR 179
>UniRef50_Q8LPJ0 Cluster: Clathrin-associated protein, putative;
n=7; Magnoliophyta|Rep: Clathrin-associated protein,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 299
Score = 83.0 bits (196), Expect = 5e-15
Identities = 48/166 (28%), Positives = 89/166 (53%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P G F+L+S + + + P+ V+ ++ S R ++ VG + G+ +E++ L
Sbjct: 139 PDGEFKLMSYRV--KKLKNTPVYVKPQI--TSDSGTCRISVLVGIRSDPGKTIESITLSF 194
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
+P CV + L++N G + +K W IGRI K P + G++++ G + P+
Sbjct: 195 QLPHCVSSADLSSNHGTVTILS-NKTCTWTIGRIPKDKTPCLSGTLALEPGLERLHVFPT 253
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
+ F I +A+SGLR+ +LD+ + +KG + T+AG+F VR+
Sbjct: 254 FKLGFKIMGIALSGLRIEKLDLQTIPPRLYKGFRAQTRAGEFDVRL 299
>UniRef50_Q013N7 Cluster: Adapter-related protein complex 3 mu 1
subunit; n=2; Ostreococcus|Rep: Adapter-related protein
complex 3 mu 1 subunit - Ostreococcus tauri
Length = 475
Score = 72.5 bits (170), Expect = 7e-12
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 18/177 (10%)
Frame = +2
Query: 41 LLSSHLGSQSVVALPLSVRHRLPLXSXGAQ-GRXALTVGPKQXMGRXLENVALEXCMPKC 217
L +++ + S V LPL +R P + GA GR ++ VG K + +E+V+L+ +P
Sbjct: 301 LKTANSDNPSSVPLPLYIR---PQSAFGASHGRVSVVVGSKPAFEKPVESVSLDVRLPSR 357
Query: 218 VLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSV---------VSGADTTG 370
VL+ +A G+ ++D S + W I + K P + V++ +G+ + G
Sbjct: 358 VLSADPSATHGEATFDVASNTVRWSIPKFPPDKTPCLSVQVNMRDEEEEATPSAGSKSDG 417
Query: 371 ASPSINVH--------FTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVR 517
AS +++ F +P VSG++V L + KYKP +GV+Y TK+G VR
Sbjct: 418 ASRRVHLQEVVDITASFKVPGAGVSGIKVETLQVRNEKYKPTQGVRYHTKSGAVVVR 474
>UniRef50_A2DA54 Cluster: Adaptor complexes medium subunit family
protein; n=2; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 407
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/122 (26%), Positives = 58/122 (47%)
Frame = +2
Query: 143 LTVGPKQXMGRXLENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLP 322
+ + P + + +E + + P V L A+ G+ SY+ ++ ++W I +
Sbjct: 279 IAMKPDAALPKNVEEIEIRFAFPPGVGTPSLVASDGRASYESATRDVVWTIQSYGKKEPA 338
Query: 323 NIKGSVSVVSGADTTGASPSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAG 502
++GS S S D G P + F SG ++ +LD+ Y PF+GVKY+ +AG
Sbjct: 339 VLRGSASTESNFDLGGRYPMVGARFIYVGQTASGFKIEKLDLERVDYTPFRGVKYIIQAG 398
Query: 503 KF 508
+
Sbjct: 399 SY 400
>UniRef50_Q1EQ15 Cluster: Mu subunit isoform a; n=1; Entamoeba
histolytica|Rep: Mu subunit isoform a - Entamoeba
histolytica
Length = 426
Score = 65.7 bits (153), Expect = 8e-10
Identities = 35/104 (33%), Positives = 57/104 (54%)
Frame = +2
Query: 209 PKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPSIN 388
P V +C L N GKY +D + +L+W IG+ + +P I G+V+ S + T ++
Sbjct: 325 PVSVTSCQLVVNTGKYIFDGIKHVLIWTIGKHDPKIIPTISGTVN-RSMYEDTDTFTKVS 383
Query: 389 VHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
++F I A SGLR LD Y+ KGVK+ T G++ +++
Sbjct: 384 MNFQIINYAASGLRFKHLDC-NQPYQVRKGVKFTTYGGRYLIKV 426
>UniRef50_Q5KLY0 Cluster: Adaptor complex subunit medium chain 3,
putative; n=1; Filobasidiella neoformans|Rep: Adaptor
complex subunit medium chain 3, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 454
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 248 GKYSYDPVSKMLLWDIGR-IELPKLPNIKGSVSVVSGADTTGASPSINVHFTIPQLAVSG 424
G + +DP +++L W + + + P + G+ + S SPS +V FTI + S
Sbjct: 364 GNWEFDPHTQILKWHLASLVSTERSPTLTGTFT--SSEARPIVSPSFDVGFTIQNYSYSN 421
Query: 425 LRVSRLDMYG-AKYKPFKGVKYVTKAGKFHVR 517
LRV++L + G YKPFKGVK + +AGK VR
Sbjct: 422 LRVNQLKVQGDVMYKPFKGVKMIGRAGKIEVR 453
>UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family
protein; n=5; Oligohymenophorea|Rep: Adaptor complexes
medium subunit family protein - Tetrahymena thermophila
SB210
Length = 433
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = +2
Query: 185 NVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGA-D 361
NVAL+ PK N TA+ G+ Y+P ++W I + + ++ + + + A D
Sbjct: 320 NVALKVPCPKNTANTSNTASIGRAKYEPEQGGIVWRIKKFQGETEALLRCEIVLSNTALD 379
Query: 362 TTGASPSINVHFTIPQLAVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKF 508
P I++ F +P SGLRV L ++ + Y P K ++Y+TK G++
Sbjct: 380 KNWVKPPISLEFQVPSFTASGLRVRFLRIHEKSGYHPTKWIRYITKGGEY 429
>UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba
histolytica|Rep: Mu 2 subunit isoform 2 - Entamoeba
histolytica
Length = 407
Score = 55.6 bits (128), Expect = 8e-07
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 182 ENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGAD 361
ENV ++ +PK C G Y P +LW I R I V +V
Sbjct: 295 ENVRIKIPVPKNAALCKTRCTAGSAKYHPEHAAILWRISRFNGKTQQTITVDVDLVQTTQ 354
Query: 362 T-TGASPSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
+ P I + F IP L +GL++ L + + YK K V+Y+TKAG R+
Sbjct: 355 SQRWDKPPILMDFVIPALTATGLQIRYLKI-ASDYKTIKWVRYITKAGAIQYRL 407
>UniRef50_Q583J1 Cluster: Mu-adaptin 3, putative; n=3;
Trypanosoma|Rep: Mu-adaptin 3, putative - Trypanosoma
brucei
Length = 426
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Frame = +2
Query: 242 NQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASP----SINVHFTIPQ 409
+ G ++ ML+W++G + ++ G + + + G +P S V F+IP
Sbjct: 330 SHGNTNFKKARNMLVWNVGSLHRGTC-SLSGEFTFGTEREKEGLAPCTGGSALVEFSIPN 388
Query: 410 LAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVR 517
+S +RV + + KP+KGVKYVT AG+F VR
Sbjct: 389 YLLSSIRVDSVQVLNDLTKPYKGVKYVTTAGRFAVR 424
>UniRef50_A2E9B8 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 395
Score = 52.4 bits (120), Expect = 8e-06
Identities = 35/162 (21%), Positives = 68/162 (41%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P G F L+S + ++ LP+ V + ++ + P ++N+ +
Sbjct: 233 PDGQFTLMS-YTCKANITNLPVFVIPKFSFSKVSVIFDISIRLAPNYISS--IKNIQISF 289
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
+PK A G Y ML+W + + ++ ++ GS S+ G +
Sbjct: 290 NLPKGFHQPSCAAGTGSMKYLKGQNMLIWSLEATDQKEILSLSGSCSIDEGINKNSCEIP 349
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKF 508
I V F + ++SG ++ +D K K +KY T+AG++
Sbjct: 350 IFVDFKLEDTSISGFKIEEIDPIN-NVKCNKVIKYQTRAGRY 390
>UniRef50_Q6CC50 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 419
Score = 50.4 bits (115), Expect = 3e-05
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +2
Query: 155 PKQXMGRXLENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKG 334
PKQ + NV + P+ + A+ GK YD + ++W + RI +++
Sbjct: 299 PKQ---QTATNVVINIPTPRNAAKTTINASNGKAKYDSSTNQIVWKVSRISGGSEISLRA 355
Query: 335 SVSVVSGAD-TTGASPSINVHFTIPQLAVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKF 508
+ + + T P I++ F I + SGL V L ++ + Y K V+Y+ K G +
Sbjct: 356 TAELTFTTEKTPWNKPPISMDFEITMITCSGLVVRYLKVFEKSNYNTVKWVRYLMKGGSY 415
Query: 509 HVR 517
+R
Sbjct: 416 EIR 418
>UniRef50_A2ER69 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 433
Score = 48.4 bits (110), Expect = 1e-04
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +2
Query: 206 MPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPSI 385
MP+ + +QGK + ++W I +I ++ V A TT SPS+
Sbjct: 323 MPENASETQIEQSQGKGVFVGEQNAVIWKINGFAGKTQADI--TIYVTCLASTTNESPSL 380
Query: 386 NV------HFTIPQLAVSGLRVSRLDMYG-AKYKPFKGVKYVTKAGKFHVRM 520
+ F IP L+ SGL + L + + Y P K ++Y+T+AGK+ VRM
Sbjct: 381 KIKDPISCEFNIPMLSASGLALQYLKVVEKSNYTPDKWIRYLTQAGKYEVRM 432
>UniRef50_Q4N810 Cluster: Adaptin medium chain, putative; n=2;
Theileria|Rep: Adaptin medium chain, putative -
Theileria parva
Length = 493
Score = 42.7 bits (96), Expect(2) = 6e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 377 PSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
PSI++ F IP + SGL +S LD+ K K K + YVTK G + R+
Sbjct: 443 PSISLGFHIPWFSASGLYLSSLDLSNTKSKVSKNINYVTKGGLYLHRL 490
Score = 22.6 bits (46), Expect(2) = 6e-04
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 314 KLPNIKGSVSVVSGADTTGASPSINV--HF 397
K+P K + +VSG +TG + +N+ HF
Sbjct: 379 KIPIPKTTKEIVSGTISTGTTMDVNLSHHF 408
>UniRef50_Q99186 Cluster: AP-2 complex subunit mu; n=2;
Saccharomyces cerevisiae|Rep: AP-2 complex subunit mu -
Saccharomyces cerevisiae (Baker's yeast)
Length = 491
Score = 45.6 bits (103), Expect = 9e-04
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Frame = +2
Query: 182 ENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGAD 361
++V L +P ++C ++ + G + P ++W + L S VS +D
Sbjct: 373 KDVVLHIPVPPSTVDCKISVSNGHCKFVPEENAMIWRFNKYN--GLTENTLSAVTVSTSD 430
Query: 362 TTGAS------PSINVHFTIPQLAVSGLRVSRLDMYG--AKYKPFKGVKYVTKAGKFHVR 517
TT + P I++ F + + SGL V + G +K++ K +KY++KAG + VR
Sbjct: 431 TTQLNLQQWTRPPISLEFEVMMFSNSGLVVRYFTISGKDSKHRAVKWIKYISKAGSYEVR 490
>UniRef50_A2DJF7 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 396
Score = 44.8 bits (101), Expect = 0.002
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 2/157 (1%)
Frame = +2
Query: 44 LSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEXCMPKCVL 223
L ++ S LPL + + S L Q + + L N+ + +P+ +
Sbjct: 240 LMKYVAEPSASQLPLFITPKFSWSSVSVVFEIILR--SDQNLTQKLTNIQISFDLPEGIS 297
Query: 224 NCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPSINVH--F 397
+ + G + ++ ++W I + P + GS S+ + TT S SI +H F
Sbjct: 298 MPSMASIVGTTDFIHSTRTVVWKIDSLGNTP-PILNGSASITNL--TTARSKSIFIHAQF 354
Query: 398 TIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKF 508
P SGL+V D+ KG+KY TK+G +
Sbjct: 355 VAPNYTYSGLKVDNFDIETNAKNLTKGIKYSTKSGVY 391
>UniRef50_Q6CUL9 Cluster: Similar to sp|Q99186 Saccharomyces
cerevisiae YOL062c APM4 AP-2 complex subunit; n=3;
Saccharomycetales|Rep: Similar to sp|Q99186
Saccharomyces cerevisiae YOL062c APM4 AP-2 complex
subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 475
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +2
Query: 182 ENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGAD 361
++V ++ +P + C + GK YD K ++W + + + G V++ + +
Sbjct: 356 KDVTVKIPVPPTTIKCDFNVSGGKCKYDAGEKCMVWKYNKYKGSTENTLSGKVAIPATSH 415
Query: 362 TTG-----ASPSINVHFTIPQLAVSGLRVSRLDMYGAK--YKPFKGVKYVTKAGKFHVR 517
+ P I++ F I + SGL V L + Y+P K +KY++ +G + +R
Sbjct: 416 DLSDLLRWSRPPISMGFEIVMFSNSGLVVRHLKCQEPQLNYQPVKWIKYISHSGAYEIR 474
>UniRef50_A7AS46 Cluster: Clathrin coat adaptor subunit, putative;
n=1; Babesia bovis|Rep: Clathrin coat adaptor subunit,
putative - Babesia bovis
Length = 474
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +2
Query: 185 NVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGAD- 361
NV ++ +P + + +N G+ M+ W +G++ + +++ +
Sbjct: 358 NVGMDIPLPINASHVEIISNAGQCQIKIAENMVHWHLGKVYGQTILSMEFHCRLTKSITG 417
Query: 362 -TTGASPSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
+T SP + +HF +P + SGL + + + +YK K V Y T G++H ++
Sbjct: 418 VSTHLSP-LALHFDLPNYSFSGLYIRDVKITNTQYKTIKSVSYTTVNGEYHYKL 470
>UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep:
F20B24.16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 411
Score = 43.6 bits (98), Expect = 0.004
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 5/171 (2%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLE-NVALE 199
P G F L++ L +Q + + + + L Q R +V +E
Sbjct: 240 PDGSFDLMTYRLSTQVLECVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIE 299
Query: 200 XCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSV---SVVSGADTTG 370
+P N + + G +Y P L+W I K +K S+ + T
Sbjct: 300 LPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPE 359
Query: 371 ASPSINVHFTIPQLAVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKFHVRM 520
I V F IP+ VSG++V L + + Y+ V+Y+T AG++ +R+
Sbjct: 360 RKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRL 410
>UniRef50_Q4Q1B6 Cluster: Clathrin coat assembly protein-like
protein; n=3; Leishmania|Rep: Clathrin coat assembly
protein-like protein - Leishmania major
Length = 438
Score = 43.6 bits (98), Expect = 0.004
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 170 GRXLENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRI----ELPKLPNIKGS 337
GR ++V + P + GK YDPVS ++W + + E+ I+
Sbjct: 317 GRVAKDVQVSVACPDNTATAEVKVGHGKAKYDPVSHAIVWKLPEVKSGEEIAFFAEIR-Q 375
Query: 338 VSVVSGADTTGASPSINVHFTIPQLAVSGLRVSRLDMY--GAKYKPFKGVKYVTKAGKFH 511
++ + P I + F L+++GLR++ L + Y K ++Y AG +
Sbjct: 376 ITPTENTELLWTKPPIRIAFQCVSLSLTGLRINELVVKEPTLMYTASKWIRYTVMAGDYQ 435
Query: 512 VRM 520
R+
Sbjct: 436 CRI 438
>UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6;
Alveolata|Rep: Clathrin medium chain, putative -
Theileria parva
Length = 452
Score = 43.2 bits (97), Expect = 0.005
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 221 LNCC-LTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGAD---TTGASPSIN 388
+NC QG Y P + W + + + K+ + S + S +D T + +
Sbjct: 347 VNCPEFNPTQGSVKYLPDQDAITWYVKQFQGDKVYTMFASFGLPSVSDESRNTFSKNPVK 406
Query: 389 VHFTIPQLAVSGLRVSRLDMYGAK-YKPFKGVKYVTKAGKFHVRM 520
+ F IP VSG+ V L + YK V+Y+TK G + +RM
Sbjct: 407 IKFEIPYYTVSGINVKHLRITDKTGYKALPWVRYITKNGDYQLRM 451
>UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1;
Schizosaccharomyces pombe|Rep: AP-2 complex subunit mu -
Schizosaccharomyces pombe (Fission yeast)
Length = 446
Score = 42.3 bits (95), Expect = 0.008
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +2
Query: 206 MPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTG----A 373
+P V+ N+GK Y+P ++ W I R L + I + V ++TT A
Sbjct: 338 VPTNVVKANPRVNRGKAGYEPSENIINWKIPRF-LGETELI--FYAEVELSNTTNQQIWA 394
Query: 374 SPSINVHFTIPQLAVSGLRVSRL---DMYGAKYKPFKGVKYVTKAGKFHVRM 520
P I++ F I SGL V L + +KYK K V+Y T+AG +R+
Sbjct: 395 KPPISLDFNILMFTSSGLHVQYLRVSEPSNSKYKSIKWVRYSTRAGTCEIRI 446
>UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6;
Saccharomycetales|Rep: AP-1 complex subunit mu-1 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 445
Score = 40.7 bits (91), Expect = 0.025
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 5/169 (2%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P G F L+S L ++ PL + ++ TV + NV +
Sbjct: 273 PDGEFTLMSYRLSLAQFLSKPLILVDCKTKMHKHSRIEIVCTVRAQIKKKSTANNVEVII 332
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTG---A 373
+P + G + P L+W + KL + + + + D T +
Sbjct: 333 PIPDDADSPKFNPEYGSVKWIPEKSCLVWKLKTFPGGKLFTMSAELGLPAVMDDTENILS 392
Query: 374 SPSINVHFTIPQLAVSGLRVS--RLDMYGAKYKPFKGVKYVTKAGKFHV 514
I V+F+IP SG++V R++ +Y+ + V+Y+TK+G+ ++
Sbjct: 393 KKPIKVNFSIPYFTTSGIQVRYLRINEPKLQYQSYPWVRYITKSGEDYI 441
>UniRef50_A3LVW0 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 465
Score = 40.7 bits (91), Expect = 0.025
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Frame = +2
Query: 185 NVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRI----------ELPKLPNIKG 334
NV ++ PK VL+ + + GK + P ++LW + E+ N
Sbjct: 338 NVQIKVPTPKGVLDSYSSNSAGKSKFHPEDNVILWKFNKFFGEQEHVLTAEVELADNSHD 397
Query: 335 SVSVVSGADTTGA-----SPSINVHFTIPQLAVSGLRVSRLDMYG-AKYKPFKGVKYVTK 496
+ ++ +TT + P I + F I + SGL V L + + YK K VKY T+
Sbjct: 398 TSQQMAQTNTTNSILNWSRPPIKLDFVIEMFSSSGLAVKFLKVQEKSNYKTVKWVKYSTQ 457
Query: 497 AGKFHVR 517
+G + +R
Sbjct: 458 SGSYEIR 464
>UniRef50_Q4Q2T6 Cluster: Adaptor complex subunit medium chain 3,
putative; n=3; Leishmania|Rep: Adaptor complex subunit
medium chain 3, putative - Leishmania major
Length = 468
Score = 40.3 bits (90), Expect = 0.033
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +2
Query: 335 SVSVVSGADTTGASPSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHV 514
S + A G + V F +P +S LRV + + KP+KG+KY+T++G + +
Sbjct: 406 SARATARAAGVGNATMAAVSFQLPNRIMSSLRVDSVQVLNEIGKPYKGLKYLTQSGSYFI 465
Query: 515 R 517
R
Sbjct: 466 R 466
>UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=8;
Eukaryota|Rep: Clathrin coat assembly protein ap54 -
Plasmodium yoelii yoelii
Length = 459
Score = 39.5 bits (88), Expect = 0.057
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +2
Query: 248 GKYSYDPVSKMLLWDIGRIELPK--LPNIK-GSVSVVSGA--DTTGASPSINVHFTIPQL 412
G Y P +LLW I + + K + N + G S+VS D P +NV F IP
Sbjct: 363 GTVKYYPDKDILLWKIKQFQGQKEYIMNAQFGLPSIVSNENKDIYYKRP-VNVKFEIPYF 421
Query: 413 AVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKFHVRM 520
VSG+ V L + + Y+ V+Y+T+ G + VR+
Sbjct: 422 TVSGITVRYLKIIEKSGYQALPWVRYITQNGDYQVRI 458
>UniRef50_Q4P2F1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 689
Score = 39.5 bits (88), Expect = 0.057
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Frame = +2
Query: 248 GKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPSINVH-------FTIP 406
G Y YDP +K+L W I ++ LP+ ++ TTG + S+ H +T P
Sbjct: 594 GNYIYDPSTKILRWTIPKL----LPSTSQRPCLLKLTWTTGDARSLPTHSSGITVGWTNP 649
Query: 407 QLAVSGLRVSRLDMYGAK---YKPFKGVKYVTKAGKFHVRM 520
+S L+V +++ Y+PFKGV+ +K GK R+
Sbjct: 650 TQGLSHLKVDSVNLTNTNTHAYRPFKGVRSFSK-GKLVYRV 689
>UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=17;
Viridiplantae|Rep: Uncharacterized protein At5g46630.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 441
Score = 39.1 bits (87), Expect = 0.076
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 4/141 (2%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLE--NVAL 196
P G F L+ + V LP V LP + R + V K G + V +
Sbjct: 273 PDGEFELMKYRITEG--VNLPFRV---LPTIKELGRTRMEVNVKVKSVFGAKMFALGVVV 327
Query: 197 EXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVS--GADTTG 370
+ +PK G+ Y+P L+W I + + + ++S G +
Sbjct: 328 KIPVPKQTAKTNFQVTTGRAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSW 387
Query: 371 ASPSINVHFTIPQLAVSGLRV 433
P I + F +P SGLRV
Sbjct: 388 TRPPIQMEFQVPMFTASGLRV 408
>UniRef50_Q00U04 Cluster: Clathrin adaptor complexes medium subunit
family protein; n=2; Ostreococcus|Rep: Clathrin adaptor
complexes medium subunit family protein - Ostreococcus
tauri
Length = 496
Score = 39.1 bits (87), Expect = 0.076
Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 7/167 (4%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXM--GRXLENVAL 196
P G F L+ + V LP + +P + R A++V + V +
Sbjct: 318 PDGEFELVRYRVSDN--VTLPFKL---MPAVKELGRTRLAMSVNLRSLYDPSTVANEVRV 372
Query: 197 EXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADT--TG 370
+PK + + GK Y P L W I ++ + + V + +
Sbjct: 373 RIPVPKLTARATIRVSAGKAKYVPEEGCLRWKIKKLAGHQELQLDAEVMLANTLSDHKPW 432
Query: 371 ASPSINVHFTIPQLAVSGLRVSRLDMYG---AKYKPFKGVKYVTKAG 502
P IN+ F +P SGLR+ L++ Y + V+Y+ ++G
Sbjct: 433 VQPPINIEFNVPMFTASGLRIRFLNVEERNMGNYDVTRWVRYLCQSG 479
>UniRef50_Q24HW4 Cluster: Adaptor complexes medium subunit family
protein; n=1; Tetrahymena thermophila SB210|Rep: Adaptor
complexes medium subunit family protein - Tetrahymena
thermophila SB210
Length = 346
Score = 39.1 bits (87), Expect = 0.076
Identities = 30/166 (18%), Positives = 73/166 (43%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P+G LL ++ + +V LP ++ H L + + L P + E+ ++
Sbjct: 183 PSGSCSLLYYNIKT-NVCRLPFNLIHHLEITKDTVKINFKLNAQPIRGQEYKTEDFYVKI 241
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
+P ++ + +G S + S L+W +G I + + + + + ++
Sbjct: 242 ILPSEMIQKEINVKKGNVSTNDNS--LIWRVGTIPKDESLTFQAILQDKNQQNMKNSTFV 299
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
+ FTIP +VSG ++ + + + + + ++K+G + +R+
Sbjct: 300 ACLKFTIPDYSVSGTKIDKATVKNSAENQRRLARNISKSGHYEIRL 345
>UniRef50_A3ZSS4 Cluster: X-Pro dipeptidyl-peptidase; n=1;
Blastopirellula marina DSM 3645|Rep: X-Pro
dipeptidyl-peptidase - Blastopirellula marina DSM 3645
Length = 1516
Score = 38.7 bits (86), Expect = 0.100
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +2
Query: 233 LTANQGKYS--YDPVSKMLLWDIGRIELPKLPNIK--GSVSVVSGADTTGASPSINVHFT 400
LTA G ++ Y P K LL R++LP ++ S+V + SP I+ F
Sbjct: 507 LTAANGNHTITYSPTGKYLLDRYSRVDLPPKHELRRANDGSLVCSLEEADISPLISAGFQ 566
Query: 401 IPQLAVSGLRVSRLDMYGAKYKP 469
+P++ + R + D++G Y+P
Sbjct: 567 LPEVFSAKGRDGQTDIWGVIYRP 589
>UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas
vaginalis G3|Rep: Mu adaptin, putative - Trichomonas
vaginalis G3
Length = 426
Score = 37.9 bits (84), Expect = 0.17
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 182 ENVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVS-GA 358
+NV + +P V G+ Y P L+W I + K +++ + S +
Sbjct: 312 QNVTIRVPVPPDVDTPKAQCTAGRMRYSPNDNALVWTIKQFPGRKQFSLRAHFGLPSVES 371
Query: 359 DTTGASPSINVHFTIPQLAVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKFHVR 517
+ + I V+F IP VSGLRV L + Y+ V+Y+T G + R
Sbjct: 372 EEEESKRPIVVNFEIPFFTVSGLRVQYLKVIEQTGYQAVTWVRYLTTDGTYEFR 425
>UniRef50_A2DPT4 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 428
Score = 37.9 bits (84), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 365 TGASPSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
T + I+ F IP+L++SGL + L++ K KP ++Y T+AGKF + M
Sbjct: 372 TKLNKPISAEFHIPKLSMSGLSILNLNV--DKDKPDIYIRYATEAGKFQIMM 421
>UniRef50_Q9SB50 Cluster: Clathrin coat assembly like protein; n=7;
Magnoliophyta|Rep: Clathrin coat assembly like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 451
Score = 37.1 bits (82), Expect = 0.30
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +2
Query: 272 SKMLLWDIGRIELPKLPNIKGSVSVVS---GADTTGASPSINVHFTIPQLAVSGLRVSRL 442
+KML W++ +I ++ ++ G T A P +++ FTIP VS L+V L
Sbjct: 365 NKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGP-VSMTFTIPMYNVSKLQVKYL 423
Query: 443 DMY--GAKYKPFKGVKYVTKAGKFHVRM 520
+ + Y P++ V+YVT+A + R+
Sbjct: 424 QIAKKSSSYNPYRWVRYVTQANSYVARI 451
>UniRef50_Q550G8 Cluster: Clathrin-adaptor medium chain apm 4; n=3;
Dictyostelium discoideum|Rep: Clathrin-adaptor medium
chain apm 4 - Dictyostelium discoideum AX4
Length = 530
Score = 36.3 bits (80), Expect = 0.53
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
I + F+IPQ + S L++ L M G+ P + ++Y+T + F R+
Sbjct: 483 IGLEFSIPQFSCSTLQIKFLKMLGSNISPIRWIRYITDSKSFVSRI 528
>UniRef50_Q6CMN9 Cluster: Similar to sp|P38153 Saccharomyces
cerevisiae YBR288c APM3 AP-3 complex subunit; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P38153
Saccharomyces cerevisiae YBR288c APM3 AP-3 complex
subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 497
Score = 36.3 bits (80), Expect = 0.53
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 419 SGLRVSRLDMY-GAKYKPFKGVKYVTKAGKFHVR 517
SG+++ +D+ G KPFKGVKY+TK G R
Sbjct: 464 SGIKLQSIDVVNGGPKKPFKGVKYLTKTGSLEYR 497
>UniRef50_Q59RK0 Cluster: Potential clathrin-associated protein AP-3
complex component; n=1; Candida albicans|Rep: Potential
clathrin-associated protein AP-3 complex component -
Candida albicans (Yeast)
Length = 512
Score = 36.3 bits (80), Expect = 0.53
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = +2
Query: 419 SGLRVSRLDMYGAK-----YKPFKGVKYVTKAGKFHVR 517
SGL+V L + AK KP+KGVKY+TK+G + VR
Sbjct: 474 SGLKVDSLKIISAKGLGDTVKPYKGVKYMTKSGNYIVR 511
>UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 515
Score = 36.3 bits (80), Expect = 0.53
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 410 LAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVR 517
L V L++ G KPFKGVKY+T +G + VR
Sbjct: 479 LKVESLKIKSARGLGENVKPFKGVKYITNSGHYIVR 514
>UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit,
putative; n=8; Trypanosomatidae|Rep: Adaptor complex
AP-1 medium subunit, putative - Leishmania major
Length = 433
Score = 35.9 bits (79), Expect = 0.70
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +2
Query: 248 GKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSV--VSGADTTGASP-SINVHFTIPQLAV 418
G Y P L+W++G+I + + + + +D S + V F IP A
Sbjct: 338 GHLQYAPQMNALIWNLGKIAGNRHCSCSAEFHLPSIRSSDMKDLSKMPVKVRFVIPYFAA 397
Query: 419 SGLRVSRLDM-YGAKYKPFKGVKYVTKAGKFHVR 517
SG +V + + + Y V+YVT++G + +R
Sbjct: 398 SGFQVRYVKVSEKSNYVATPWVRYVTQSGVYEIR 431
>UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putative;
n=1; Toxoplasma gondii|Rep: Clathrin coat assembly
protein, putative - Toxoplasma gondii
Length = 517
Score = 34.3 bits (75), Expect = 2.2
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Frame = +2
Query: 188 VALEXCMPKCVLNCCLT----ANQGKYSYDPVSKMLLWDI----GRIELPKLPNIKGSVS 343
VAL +PK ++ C + P K L+W+I G E+ S
Sbjct: 397 VALSIPLPKGIVACSTELLPPVPLQSAEFLPAEKRLVWNIRKFHGGAEMIMRARFTSSSP 456
Query: 344 VVSGADTTGASPSINVHFTIPQLAVSGLRVS--RLDMYGAKYKPFKGVKYVTKAGKFHVR 517
V + A I++ F IP VS L+V R+ PF+ V+YVT++ + R
Sbjct: 457 VTASAAYRKEFGPISMTFEIPMFNVSNLQVRYLRIAEKNGVASPFRWVRYVTQSSSYICR 516
Query: 518 M 520
+
Sbjct: 517 V 517
>UniRef50_Q4P6W3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1976
Score = 34.3 bits (75), Expect = 2.2
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 4 PAXVIPPDWSLPVAVVPSRLTKRCGSPSLRPSSLAIXVXWGSGXLXPHCWTKAXHGEXVR 183
PA + P D S ++ +PSRL P+L+PSS + + S PH T A +
Sbjct: 17 PASIKPKDSSTSLSSLPSRLAP---PPTLKPSSADVQLDLSSASSEPHASTLARNAASRP 73
Query: 184 KCCIGXLHAEVCSK 225
K + + + + K
Sbjct: 74 KSVLPAVPSSISPK 87
>UniRef50_A5DI41 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 486
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAK-----YKPFKGVKYVTKAGKFHVR 517
+ + +T SGL+V L + +K KP+KGVKY+T G + VR
Sbjct: 434 LKLSYTAKGAVPSGLKVESLKIVSSKGLSDSVKPYKGVKYITSTGDYIVR 483
>UniRef50_Q6BJ55 Cluster: Similar to CA1432|CaAPM3 Candida albicans
CaAPM3 AP-3 complex subunit; n=1; Debaryomyces
hansenii|Rep: Similar to CA1432|CaAPM3 Candida albicans
CaAPM3 AP-3 complex subunit - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 525
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +2
Query: 419 SGLRVSRLDMYGAK-----YKPFKGVKYVTKAGKFHVR 517
SG++V L + AK KP+KGVKY+ K G F +R
Sbjct: 487 SGMKVDSLKIVSAKGLGDTVKPYKGVKYMAKTGNFIIR 524
>UniRef50_A7HCT3 Cluster: Cell surface receptor IPT/TIG domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: Cell surface
receptor IPT/TIG domain protein - Anaeromyxobacter sp.
Fw109-5
Length = 12684
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 567 FTNHCVHGSRPXTSDHILTWNLPAFVTYLTPLNGLYLAPYMSRR 436
F C + + + DH+ W +P+ TY+ + G PY S R
Sbjct: 10441 FATQCTYAT--SSGDHVYEWTVPSTATYVVKVTGKSFLPYWSVR 10482
>UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=5;
Plasmodium (Vinckeia)|Rep: Clathrin coat assembly
protein ap50 - Plasmodium yoelii yoelii
Length = 601
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 383 INVHFTIPQLAVSGLRVSRLDMYG-AKYKPFKGVKYVTKAGKFHVR 517
I ++F IP SG+ + L +Y + YK K +KY+T++G + +
Sbjct: 556 ITLNFKIPMFTSSGMFIRYLKVYEKSNYKIIKWIKYLTESGAYQYK 601
>UniRef50_Q5ACY9 Cluster: Potential clathrin-associated protein AP-1
complex component; n=2; Saccharomycetales|Rep: Potential
clathrin-associated protein AP-1 complex component -
Candida albicans (Yeast)
Length = 669
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 INVHFTIPQLAVSGLRVSRLDM--YGAKYKPFKGVKYVTKA 499
I VHF +P + SGL++S L + KY F V+Y+TK+
Sbjct: 595 IKVHFKLPMVTYSGLKLSYLSVEEEQMKYPCFPWVRYLTKS 635
>UniRef50_A4R5S4 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 366
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 8 PXSSRPTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLEN 187
P + TG+ + H G+Q +V + +S + G A+ +GP Q +G L++
Sbjct: 180 PVPQQQTGYMLVPGPHPGTQQLVPVQVSTGNAREHQQPAHPGHDAMGMGPAQLLGAQLQH 239
Query: 188 VALE 199
+ L+
Sbjct: 240 IQLQ 243
>UniRef50_A0LGK7 Cluster: Extracellular ligand-binding receptor
precursor; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Extracellular ligand-binding receptor precursor -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 375
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +1
Query: 55 SRLTKRCGSPSLRPSSLAIXVXWGSGXLXPHCWTKAXHGEXVRKCCIGXLHAEVCSKLLS 234
+R+++ G PS+ PS+ ++ V G C+ GE + + L A+ + ++
Sbjct: 110 NRISEAAGIPSVSPSATSVLVNQGKKFAFRACFIDPLQGEVAARFAVNNLKAKSAAVIID 169
Query: 235 NSE 243
N++
Sbjct: 170 NAQ 172
>UniRef50_A4RV57 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 424
Score = 32.7 bits (71), Expect = 6.6
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 77 ALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEXCMPKCVLNCCLTANQGKY 256
ALPLS+ + P + G A+++ + L+NV + P C + + G++
Sbjct: 286 ALPLSI-NCWPTINGG---ETAVSIEYEASDAMDLQNVVISIPCPPCRDPPAVNSCDGEF 341
Query: 257 SYDPVSKMLLWDIGRIELPKLPNIKGSVS-VVSGADTTGASPSINVHFT 400
+D + ++ W+ IEL N GS+ V+ ADT P I+VHF+
Sbjct: 342 RFDARNGVMEWN---IELIDDSNRNGSMEFVIPVADTEAFFP-IDVHFS 386
>UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family
protein; n=3; Tetrahymena thermophila|Rep: Adaptor
complexes medium subunit family protein - Tetrahymena
thermophila SB210
Length = 444
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAK-YKPFKGVKYVTKAGKFHVRM 520
I+++F IP VSG +V L + Y V+Y+T+ G + +RM
Sbjct: 397 ISINFEIPYYTVSGFQVRYLKIQEKSGYHALPWVRYITQNGDYQIRM 443
>UniRef50_A7TDP1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 575
Score = 32.7 bits (71), Expect = 6.6
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Frame = +2
Query: 320 PNIKGSVSVVSGADTTGASPS-INVHFT-IPQLAVSGLRVSRLDMY-GAKY----KPFKG 478
P + G V S T S I++H+ I QLA SG+RV L++ G K K FKG
Sbjct: 498 PTLNGCVEYSSKTPITKMYLSRISLHYEHIGQLA-SGIRVKTLNIVSGLKAFNDEKLFKG 556
Query: 479 VKYVTKAGKFHVRM 520
VKY TK + +R+
Sbjct: 557 VKYATKTDDYSLRI 570
>UniRef50_Q1NA24 Cluster: TonB-dependent receptor; n=1; Sphingomonas
sp. SKA58|Rep: TonB-dependent receptor - Sphingomonas
sp. SKA58
Length = 767
Score = 32.3 bits (70), Expect = 8.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 505 LARFRDVLDAFEWLVLGAVHVQAAHSETADRQLRNREMNVDARTGARRISSRYHRHAPFN 326
L RDVL + GA + + + LR + N D R S++Y R PFN
Sbjct: 86 LLTLRDVLSTIPGITFGAGEGGGGYGDNIN--LRGQSANTDISIDGVRDSAQYSRTDPFN 143
Query: 325 IRQ 317
I Q
Sbjct: 144 IEQ 146
>UniRef50_O29505 Cluster: Putative uncharacterized protein; n=1;
Archaeoglobus fulgidus|Rep: Putative uncharacterized
protein - Archaeoglobus fulgidus
Length = 488
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 377 PSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKA-GKFHVRM*SEVXGREP 547
P ++VH P ++G+ +SRLD+ G K + + A G HV + V EP
Sbjct: 309 PWLDVHILFPMYLLTGIGLSRLDLDGKKISALAALCILFSAYGSIHVNHINPVNPAEP 366
>UniRef50_Q750L8 Cluster: AP-3 complex subunit mu; n=1; Eremothecium
gossypii|Rep: AP-3 complex subunit mu - Ashbya gossypii
(Yeast) (Eremothecium gossypii)
Length = 411
Score = 32.3 bits (70), Expect = 8.7
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Frame = +2
Query: 332 GSVSVVSGA-----DTTGASPSINVHFTIPQLAV----SGLRVSRLDMYGAK--YKPFKG 478
GSV V+ G T A P H + V SG+RV + + KPFKG
Sbjct: 338 GSVPVLRGCVENPESTPHAPPVFPSHLAVSYSHVGQLPSGIRVDTIALSDLPPGSKPFKG 397
Query: 479 VKYVTKAGKFHVR 517
VKY ++AG + VR
Sbjct: 398 VKYTSRAGDYIVR 410
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,855,722
Number of Sequences: 1657284
Number of extensions: 10695790
Number of successful extensions: 29076
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 28157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29056
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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