Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_I19
(586 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 73 2e-13
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 52 3e-07
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 43 2e-04
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 42 5e-04
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 36 0.018
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588... 30 1.6
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 30 1.6
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 29 3.6
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 29 3.6
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 28 4.8
12_01_0724 - 6377023-6379392 28 6.3
06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776 28 6.3
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 28 6.3
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 28 6.3
02_03_0347 - 17999780-18000592,18000656-18003019 28 6.3
02_03_0116 - 15440263-15441024,15441097-15443451 28 6.3
12_02_0416 - 18891945-18892319,18892416-18892550,18892634-18893638 27 8.3
03_02_0028 - 5118621-5119448 27 8.3
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/161 (26%), Positives = 80/161 (49%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
P G F L+S + + + P+ V+ +L S R + VG K G+ ++++ ++
Sbjct: 261 PDGQFELMSYRV--KKLKTTPIYVKPQLTSDSGNC--RVNVMVGIKNDPGKTIDSITVQF 316
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
+P + + LTAN G + W IG+I K P++ G++ + G P+
Sbjct: 317 RLPPLIASADLTANYGTVDI-LADQTCFWTIGQIPKDKAPSLSGNLRLEEGLTHLHTFPT 375
Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGK 505
V F I +A+SGL++ +L++ P+KG + T+AG+
Sbjct: 376 FEVKFKIMGVALSGLQIDKLEVKNTPNAPYKGFRAQTQAGR 416
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 52.4 bits (120), Expect = 3e-07
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 5/170 (2%)
Frame = +2
Query: 23 PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLE--NVAL 196
P G F L+ + V LP V LP + R + V K G + V +
Sbjct: 273 PDGEFELMKYRITEG--VNLPFRV---LPTIKELGRTRMEINVKVKSVFGAKMFALGVVV 327
Query: 197 EXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVS--GADTTG 370
+ +PK GK Y+ L+W I + + V ++S G +
Sbjct: 328 KVPVPKQTAKTSFQTTSGKAKYNASIDSLVWKIRKFPGQTEATMSAEVELISTMGEKKSW 387
Query: 371 ASPSINVHFTIPQLAVSGLRVSRLDMYGAK-YKPFKGVKYVTKAGKFHVR 517
P I + F +P SGLRV L ++ Y + V+Y+T+AG + +R
Sbjct: 388 NRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 437
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +2
Query: 185 NVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADT 364
NV +E +P+ N + + G +Y P ++W I K + S+ S
Sbjct: 288 NVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKSFPGGKEYMCRAEFSLPSITSE 347
Query: 365 TG---ASPSINVHFTIPQLAVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKFHVRM 520
G I V F IP VSG++V L + + Y+ V+Y+T AG++ +R+
Sbjct: 348 DGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL 403
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 185 NVALEXCMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADT 364
NV +E +P N + + G +Y P ++W + K + S+ S
Sbjct: 313 NVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKSFPGGKDYMCRAEFSLPSITAE 372
Query: 365 TGA---SPSINVHFTIPQLAVSGLRVSRLDMY-GAKYKPFKGVKYVTKAGKFHVRM 520
A I V F IP VSG++V L + + Y+ V+Y+T AG++ +R+
Sbjct: 373 EAAPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL 428
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 350 SGADTTGASPSINVHFTIPQLAVSGLRVSRLDMY--GAKYKPFKGVKYVTKAGKFHVRM 520
+G T A P +N++FTIP S L+V L + Y P++ V+YVT+A + R+
Sbjct: 362 AGNLTKEAGP-VNMNFTIPMYNTSKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVARL 419
>03_02_0142 +
5877480-5879663,5879783-5879898,5880749-5882419,
5882570-5882618,5882703-5882941,5883073-5883174,
5883634-5883862
Length = 1529
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 364 DGRQSEHQRSFHDSAIGGQRSQSEPPGH 447
DG+Q EH D SQS PPGH
Sbjct: 837 DGKQPEHSTKGEDQTQPSAASQSLPPGH 864
>01_06_1164 -
35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 110 MASDDGRREGEPQRFVSRDGTTATGSDQSGG 18
M+ +GRR+GE + V DG+T G+ Q+ G
Sbjct: 56 MSDGEGRRDGERRLLVYGDGSTPQGALQAAG 86
>10_08_0971 -
21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 549 HGSRPXTSDHILTWNLPAFVTYLTPLNGL--YLAPY 448
H TS W++P+ V +LTP +GL Y PY
Sbjct: 381 HAPFAHTSTFAKGWSVPSLVKFLTPASGLQGYWDPY 416
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 116 TXMASDDGRREGEPQRFVSRDGTTATGSDQSGG 18
T +GRR+GE + V DG+T G+ Q+ G
Sbjct: 54 TPTGGGEGRRDGERRLLVYGDGSTPQGALQAAG 86
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 549 HGSRPXTSDHILTWNLPAFVTYLTPLNGL--YLAPY 448
H TS W++P+ V +LTP +GL Y PY
Sbjct: 381 HAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPY 416
>12_01_0724 - 6377023-6379392
Length = 789
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 98 DGRREGEPQRFVSRDGTTATGSDQSGG 18
+GRR+GE + V DG+T G+ Q+ G
Sbjct: 60 EGRRDGERRLLVYGDGSTPQGALQAAG 86
>06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776
Length = 833
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 98 DGRREGEPQRFVSRDGTTATGSDQSGG 18
+GRR+GE + V DG+T G+ Q+ G
Sbjct: 60 EGRRDGERRLLVYGDGSTPQGALQAAG 86
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 98 DGRREGEPQRFVSRDGTTATGSDQSGG 18
+GRR+GE + V DG+T G+ Q+ G
Sbjct: 60 EGRRDGERRLLVYGDGSTPQGALQAAG 86
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 98 DGRREGEPQRFVSRDGTTATGSDQSGG 18
+GRR+GE + V DG+T G+ Q+ G
Sbjct: 60 EGRRDGERRLLVYGDGSTPQGALQAAG 86
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 98 DGRREGEPQRFVSRDGTTATGSDQSGG 18
+GRR+GE + V DG+T G+ Q+ G
Sbjct: 60 EGRRDGERRLLVYGDGSTPQGALQAAG 86
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 98 DGRREGEPQRFVSRDGTTATGSDQSGG 18
+GRR+GE + V DG+T G+ Q+ G
Sbjct: 60 EGRRDGERRLLVYGDGSTPQGALQAAG 86
>12_02_0416 - 18891945-18892319,18892416-18892550,18892634-18893638
Length = 504
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGS 337
C+ K L CCL+A + + + + + DI R++ +L N +G+
Sbjct: 373 CLEKLYLKCCLSAGNNYWRCEYQTLIKILDI-RLKTVELENYRGT 416
>03_02_0028 - 5118621-5119448
Length = 275
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -1
Query: 478 AFEWLVLGAVHVQAAHSETADRQLRNREMNVDARTGARRISSRYHRHA 335
A+ WL HV A T D + +DAR+ RR R HR A
Sbjct: 72 AYRWLKSSQWHVIEAAGITDDDH--TPRLKIDARSRLRRSRRRLHRRA 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,990,888
Number of Sequences: 37544
Number of extensions: 316851
Number of successful extensions: 926
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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