Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I19
         (586 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069388-1|AAL39533.1|  415|Drosophila melanogaster LD09732p pro...   225   3e-59
AJ009657-1|CAA08768.1|  415|Drosophila melanogaster Mu3 subunit ...   225   3e-59
AF110233-1|AAF14249.1|  415|Drosophila melanogaster clathrin-ass...   225   3e-59
AE014298-989|AAF46231.1|  415|Drosophila melanogaster CG3035-PA ...   225   3e-59
BT023525-1|AAY84925.1|  298|Drosophila melanogaster IP09948p pro...    28   8.1  
AE014298-1132|AAF46331.1|  301|Drosophila melanogaster CG17982-P...    28   8.1  

>AY069388-1|AAL39533.1|  415|Drosophila melanogaster LD09732p
           protein.
          Length = 415

 Score =  225 bits (551), Expect = 3e-59
 Identities = 102/166 (61%), Positives = 129/166 (77%)
 Frame = +2

Query: 23  PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
           P G+FRL+S H+ SQSVVA+P+ +RH   + + G QGR  LT+GP+  +GR ++ V LE 
Sbjct: 251 PDGNFRLMSYHISSQSVVAIPIYIRHNFSIKT-GEQGRLDLTIGPRNTLGRTVDKVKLEL 309

Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
            MP+CVLNC LT NQGKY++D V+K L WD+GRI++ KLPNI+GSVS+  G     A+PS
Sbjct: 310 TMPRCVLNCLLTPNQGKYTFDSVTKTLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPS 369

Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
           +NV F I QLAVSGL+V+RLDMYG KYKPFKGVKY+TKAGKF VRM
Sbjct: 370 VNVQFQISQLAVSGLKVNRLDMYGEKYKPFKGVKYLTKAGKFQVRM 415


>AJ009657-1|CAA08768.1|  415|Drosophila melanogaster Mu3 subunit of
           clathrin-associatedprotein complex AP-3 protein.
          Length = 415

 Score =  225 bits (551), Expect = 3e-59
 Identities = 102/166 (61%), Positives = 129/166 (77%)
 Frame = +2

Query: 23  PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
           P G+FRL+S H+ SQSVVA+P+ +RH   + + G QGR  LT+GP+  +GR ++ V LE 
Sbjct: 251 PDGNFRLMSYHISSQSVVAIPIYIRHNFSIKT-GEQGRLDLTIGPRNTLGRTVDKVKLEL 309

Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
            MP+CVLNC LT NQGKY++D V+K L WD+GRI++ KLPNI+GSVS+  G     A+PS
Sbjct: 310 TMPRCVLNCLLTPNQGKYTFDSVTKTLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPS 369

Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
           +NV F I QLAVSGL+V+RLDMYG KYKPFKGVKY+TKAGKF VRM
Sbjct: 370 VNVQFQISQLAVSGLKVNRLDMYGEKYKPFKGVKYLTKAGKFQVRM 415


>AF110233-1|AAF14249.1|  415|Drosophila melanogaster
           clathrin-associated adaptor complexAP-3 medium chain
           protein.
          Length = 415

 Score =  225 bits (551), Expect = 3e-59
 Identities = 102/166 (61%), Positives = 129/166 (77%)
 Frame = +2

Query: 23  PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
           P G+FRL+S H+ SQSVVA+P+ +RH   + + G QGR  LT+GP+  +GR ++ V LE 
Sbjct: 251 PDGNFRLMSYHISSQSVVAIPIYIRHNFSIKT-GEQGRLDLTIGPRNTLGRTVDKVKLEL 309

Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
            MP+CVLNC LT NQGKY++D V+K L WD+GRI++ KLPNI+GSVS+  G     A+PS
Sbjct: 310 TMPRCVLNCLLTPNQGKYTFDSVTKTLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPS 369

Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
           +NV F I QLAVSGL+V+RLDMYG KYKPFKGVKY+TKAGKF VRM
Sbjct: 370 VNVQFQISQLAVSGLKVNRLDMYGEKYKPFKGVKYLTKAGKFQVRM 415


>AE014298-989|AAF46231.1|  415|Drosophila melanogaster CG3035-PA
           protein.
          Length = 415

 Score =  225 bits (551), Expect = 3e-59
 Identities = 102/166 (61%), Positives = 129/166 (77%)
 Frame = +2

Query: 23  PTGHFRLLSSHLGSQSVVALPLSVRHRLPLXSXGAQGRXALTVGPKQXMGRXLENVALEX 202
           P G+FRL+S H+ SQSVVA+P+ +RH   + + G QGR  LT+GP+  +GR ++ V LE 
Sbjct: 251 PDGNFRLMSYHISSQSVVAIPIYIRHNFSIKT-GEQGRLDLTIGPRNTLGRTVDKVKLEL 309

Query: 203 CMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPS 382
            MP+CVLNC LT NQGKY++D V+K L WD+GRI++ KLPNI+GSVS+  G     A+PS
Sbjct: 310 TMPRCVLNCLLTPNQGKYTFDSVTKTLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPS 369

Query: 383 INVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM 520
           +NV F I QLAVSGL+V+RLDMYG KYKPFKGVKY+TKAGKF VRM
Sbjct: 370 VNVQFQISQLAVSGLKVNRLDMYGEKYKPFKGVKYLTKAGKFQVRM 415


>BT023525-1|AAY84925.1|  298|Drosophila melanogaster IP09948p
           protein.
          Length = 298

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 365 TGASPSINVHFTIPQLAVSGLRVSRLDM 448
           +G SP     FTIPQL +  LR+ +L +
Sbjct: 29  SGTSPEAMPKFTIPQLKIPQLRIPQLQL 56


>AE014298-1132|AAF46331.1|  301|Drosophila melanogaster CG17982-PA
           protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 365 TGASPSINVHFTIPQLAVSGLRVSRLDM 448
           +G SP     FTIPQL +  LR+ +L +
Sbjct: 32  SGTSPEAMPKFTIPQLKIPQLRIPQLQL 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,670,629
Number of Sequences: 53049
Number of extensions: 493113
Number of successful extensions: 1292
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)